Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30906
         (697 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    25   0.45 
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   4.2  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   7.3  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   9.6  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   9.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.6  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   9.6  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   9.6  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -1

Query: 196 LIVSVHHYMDITYPCLHITLTIVVGSLCNYI 104
           L V  HH ++   PC+++T   VV SL ++I
Sbjct: 20  LPVKKHHRLEKLVPCVYLTSFSVVLSLGSFI 50


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +1

Query: 607 KYIHNFFPKSHHFGRYNVPKSWISR*SPQ 693
           K  H  + K  H+G +NV  + +   +PQ
Sbjct: 436 KMNHPVYHKDPHYGFHNVTNTTLQNLTPQ 464


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = -3

Query: 65  HVKKITIVNWENRFCCELT 9
           ++KK+ +  W + FC ++T
Sbjct: 301 NIKKLIVNTWISLFCVKVT 319


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3

Query: 230 VTEFTDAEARLIDRECSSLHG 168
           V E+ ++ A +ID   + +HG
Sbjct: 58  VNEYVESLASIIDEAATKVHG 78


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3

Query: 230 VTEFTDAEARLIDRECSSLHG 168
           V E+ ++ A +ID   + +HG
Sbjct: 372 VNEYVESLASIIDEAATKVHG 392


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3

Query: 230 VTEFTDAEARLIDRECSSLHG 168
           V E+ ++ A +ID   + +HG
Sbjct: 605 VNEYVESLASIIDEAATKVHG 625


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3

Query: 230 VTEFTDAEARLIDRECSSLHG 168
           V E+ ++ A +ID   + +HG
Sbjct: 605 VNEYVESLASIIDEAATKVHG 625


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 513 KNEFFAIFSETVSFFAKLPQYKI 581
           +  FF I S T S+F  + Q+ +
Sbjct: 287 RGTFFGILSTTTSYFIIMIQFNM 309


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 91  FVTILYNCREIQLLLLVL 144
           +   LYNC    LLL++L
Sbjct: 141 YCQFLYNCFHSTLLLMIL 158


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,016
Number of Sequences: 336
Number of extensions: 3724
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)