Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30906
         (697 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X84753-1|CAA59234.1|  701|Homo sapiens luteinising hormone-chori...    30   9.1  
S57793-1|AAB19917.2|  699|Homo sapiens luteinizing hormone recep...    30   9.1  
M73746-1|AAA70231.1|  685|Homo sapiens lutropin/choriogonadotrop...    30   9.1  
M63108-1|AAA59515.1|  699|Homo sapiens luteinizing hormone-chori...    30   9.1  
AC087816-1|AAX88979.1|  226|Homo sapiens unknown protein.              30   9.1  

>X84753-1|CAA59234.1|  701|Homo sapiens luteinising
           hormone-choriogonadotropin receptor protein.
          Length = 701

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = -3

Query: 272 AIFNTRVRSK*FLDVTEFTDAEARLIDRECSSLHGYHISLSTYNTNNSSWISLQLY 105
           +I NT +R   F DVT+   +E+  I   C +LH   I  + +   N+  ++L+LY
Sbjct: 131 SICNTGIRK--FPDVTKVFSSESNFILEICDNLHITTIPGNAFQGMNNESVTLKLY 184


>S57793-1|AAB19917.2|  699|Homo sapiens luteinizing hormone receptor
           protein.
          Length = 699

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = -3

Query: 272 AIFNTRVRSK*FLDVTEFTDAEARLIDRECSSLHGYHISLSTYNTNNSSWISLQLY 105
           +I NT +R   F DVT+   +E+  I   C +LH   I  + +   N+  ++L+LY
Sbjct: 129 SICNTGIRK--FPDVTKVFSSESNFILEICDNLHITTIPGNAFQGMNNESVTLKLY 182


>M73746-1|AAA70231.1|  685|Homo sapiens lutropin/choriogonadotropin
           receptor protein.
          Length = 685

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = -3

Query: 272 AIFNTRVRSK*FLDVTEFTDAEARLIDRECSSLHGYHISLSTYNTNNSSWISLQLY 105
           +I NT +R   F DVT+   +E+  I   C +LH   I  + +   N+  ++L+LY
Sbjct: 127 SICNTGIRK--FPDVTKVFSSESNFILEICDNLHITTIPGNAFQGMNNESVTLKLY 180


>M63108-1|AAA59515.1|  699|Homo sapiens luteinizing
           hormone-choriogonadrotropin receptor protein.
          Length = 699

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = -3

Query: 272 AIFNTRVRSK*FLDVTEFTDAEARLIDRECSSLHGYHISLSTYNTNNSSWISLQLY 105
           +I NT +R   F DVT+   +E+  I   C +LH   I  + +   N+  ++L+LY
Sbjct: 129 SICNTGIRK--FPDVTKVFSSESNFILEICDNLHITTIPGNAFQGMNNESVTLKLY 182


>AC087816-1|AAX88979.1|  226|Homo sapiens unknown protein.
          Length = 226

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = -3

Query: 272 AIFNTRVRSK*FLDVTEFTDAEARLIDRECSSLHGYHISLSTYNTNNSSWISLQLY 105
           +I NT +R   F DVT+   +E+  I   C +LH   I  + +   N+  ++L+LY
Sbjct: 129 SICNTGIRK--FPDVTKVFSSESNFILEICDNLHITTIPGNAFQGMNNESVTLKLY 182


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,536,981
Number of Sequences: 237096
Number of extensions: 1854840
Number of successful extensions: 3260
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3260
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)