Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30905
(658 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC019302-1|AAH19302.1| 717|Homo sapiens LAS1L protein protein. 51 4e-06
BC018610-1|AAH18610.1| 717|Homo sapiens LAS1L protein protein. 51 4e-06
BC014545-1|AAH14545.1| 734|Homo sapiens LAS1-like (S. cerevisia... 51 4e-06
AL050306-3|CAI42835.1| 734|Homo sapiens novel protein protein. 51 4e-06
AL050306-2|CAB51351.1| 717|Homo sapiens novel protein protein. 51 4e-06
AK074087-1|BAB84913.1| 308|Homo sapiens FLJ00158 protein protein. 51 4e-06
AK022587-1|BAB14114.1| 734|Homo sapiens protein ( Homo sapiens ... 51 4e-06
AL050306-4|CAI42836.1| 675|Homo sapiens novel protein protein. 36 0.13
AK057426-1|BAB71480.1| 723|Homo sapiens protein ( Homo sapiens ... 30 6.3
U93850-1|AAB58270.1| 725|Homo sapiens elongation factor-2 kinas... 30 8.3
BC032665-1|AAH32665.1| 725|Homo sapiens EEF2K protein protein. 30 8.3
>BC019302-1|AAH19302.1| 717|Homo sapiens LAS1L protein protein.
Length = 717
Score = 50.8 bits (116), Expect = 4e-06
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = +1
Query: 16 LPSGIESTLILLQVHIQDLNSPDDNGNDHVLRLAYSSAIMRFINHMLDVSITK--ENTLS 189
LP + ST L++ + D+ G D LRL Y A++RF+N ++ TK + L
Sbjct: 84 LPLAVASTADLIRCKLLDVTG--GLGTDE-LRLLYGMALVRFVN-LISERKTKFAKVPLK 139
Query: 190 KAAKNVGIPDWIVELRHDTAHK 255
A+ V IPDWIV+LRH+ HK
Sbjct: 140 CLAQEVNIPDWIVDLRHELTHK 161
>BC018610-1|AAH18610.1| 717|Homo sapiens LAS1L protein protein.
Length = 717
Score = 50.8 bits (116), Expect = 4e-06
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = +1
Query: 16 LPSGIESTLILLQVHIQDLNSPDDNGNDHVLRLAYSSAIMRFINHMLDVSITK--ENTLS 189
LP + ST L++ + D+ G D LRL Y A++RF+N ++ TK + L
Sbjct: 84 LPLAVASTADLIRCKLLDVTG--GLGTDE-LRLLYGMALVRFVN-LISERKTKFAKVPLK 139
Query: 190 KAAKNVGIPDWIVELRHDTAHK 255
A+ V IPDWIV+LRH+ HK
Sbjct: 140 CLAQEVNIPDWIVDLRHELTHK 161
>BC014545-1|AAH14545.1| 734|Homo sapiens LAS1-like (S. cerevisiae)
protein.
Length = 734
Score = 50.8 bits (116), Expect = 4e-06
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = +1
Query: 16 LPSGIESTLILLQVHIQDLNSPDDNGNDHVLRLAYSSAIMRFINHMLDVSITK--ENTLS 189
LP + ST L++ + D+ G D LRL Y A++RF+N ++ TK + L
Sbjct: 84 LPLAVASTADLIRCKLLDVTG--GLGTDE-LRLLYGMALVRFVN-LISERKTKFAKVPLK 139
Query: 190 KAAKNVGIPDWIVELRHDTAHK 255
A+ V IPDWIV+LRH+ HK
Sbjct: 140 CLAQEVNIPDWIVDLRHELTHK 161
>AL050306-3|CAI42835.1| 734|Homo sapiens novel protein protein.
Length = 734
Score = 50.8 bits (116), Expect = 4e-06
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = +1
Query: 16 LPSGIESTLILLQVHIQDLNSPDDNGNDHVLRLAYSSAIMRFINHMLDVSITK--ENTLS 189
LP + ST L++ + D+ G D LRL Y A++RF+N ++ TK + L
Sbjct: 84 LPLAVASTADLIRCKLLDVTG--GLGTDE-LRLLYGMALVRFVN-LISERKTKFAKVPLK 139
Query: 190 KAAKNVGIPDWIVELRHDTAHK 255
A+ V IPDWIV+LRH+ HK
Sbjct: 140 CLAQEVNIPDWIVDLRHELTHK 161
>AL050306-2|CAB51351.1| 717|Homo sapiens novel protein protein.
Length = 717
Score = 50.8 bits (116), Expect = 4e-06
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = +1
Query: 16 LPSGIESTLILLQVHIQDLNSPDDNGNDHVLRLAYSSAIMRFINHMLDVSITK--ENTLS 189
LP + ST L++ + D+ G D LRL Y A++RF+N ++ TK + L
Sbjct: 84 LPLAVASTADLIRCKLLDVTG--GLGTDE-LRLLYGMALVRFVN-LISERKTKFAKVPLK 139
Query: 190 KAAKNVGIPDWIVELRHDTAHK 255
A+ V IPDWIV+LRH+ HK
Sbjct: 140 CLAQEVNIPDWIVDLRHELTHK 161
>AK074087-1|BAB84913.1| 308|Homo sapiens FLJ00158 protein protein.
Length = 308
Score = 50.8 bits (116), Expect = 4e-06
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = +1
Query: 16 LPSGIESTLILLQVHIQDLNSPDDNGNDHVLRLAYSSAIMRFINHMLDVSITK--ENTLS 189
LP + ST L++ + D+ G D LRL Y A++RF+N ++ TK + L
Sbjct: 101 LPLAVASTADLIRCKLLDVTG--GLGTDE-LRLLYGMALVRFVN-LISERKTKFAKVPLK 156
Query: 190 KAAKNVGIPDWIVELRHDTAHK 255
A+ V IPDWIV+LRH+ HK
Sbjct: 157 CLAQEVNIPDWIVDLRHELTHK 178
>AK022587-1|BAB14114.1| 734|Homo sapiens protein ( Homo sapiens
cDNA FLJ12525 fis, clone NT2RM4000030, weakly similar to
LAS1 PROTEIN. ).
Length = 734
Score = 50.8 bits (116), Expect = 4e-06
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = +1
Query: 16 LPSGIESTLILLQVHIQDLNSPDDNGNDHVLRLAYSSAIMRFINHMLDVSITK--ENTLS 189
LP + ST L++ + D+ G D LRL Y A++RF+N ++ TK + L
Sbjct: 84 LPLAVASTADLIRCKLLDVTG--GLGTDE-LRLLYGMALVRFVN-LISERKTKFAKVPLK 139
Query: 190 KAAKNVGIPDWIVELRHDTAHK 255
A+ V IPDWIV+LRH+ HK
Sbjct: 140 CLAQEVNIPDWIVDLRHELTHK 161
>AL050306-4|CAI42836.1| 675|Homo sapiens novel protein protein.
Length = 675
Score = 35.9 bits (79), Expect = 0.13
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = +1
Query: 136 RFINHMLDVSITK--ENTLSKAAKNVGIPDWIVELRHDTAHK 255
RF+N ++ TK + L A+ V IPDWIV+LRH+ HK
Sbjct: 79 RFVN-LISERKTKFAKVPLKCLAQEVNIPDWIVDLRHELTHK 119
>AK057426-1|BAB71480.1| 723|Homo sapiens protein ( Homo sapiens
cDNA FLJ32864 fis, clone TESTI2003625. ).
Length = 723
Score = 30.3 bits (65), Expect = 6.3
Identities = 25/92 (27%), Positives = 43/92 (46%)
Frame = +1
Query: 10 PSLPSGIESTLILLQVHIQDLNSPDDNGNDHVLRLAYSSAIMRFINHMLDVSITKENTLS 189
P+LP + T ++ +H+ DL N DHV +L Y A+ ++ T E+ +
Sbjct: 238 PALPVFGDGTNVIPTIHVLDLAGVIQNVIDHVPKLHYLVAVDESVH-------TLEDIVK 290
Query: 190 KAAKNVGIPDWIVELRHDTAHKIICLHCHCLE 285
+KN G P I ++ + A+ L CL+
Sbjct: 291 CISKNTG-PGKIQKIPRENAYLTKDLTQDCLD 321
>U93850-1|AAB58270.1| 725|Homo sapiens elongation factor-2 kinase
protein.
Length = 725
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 306 DWLKSNYWKEHKLLITDYKSGRQETDSQEETRVMIL 413
DWL++ +W L +TD G + Q+E R M+L
Sbjct: 633 DWLEALHWYNTALEMTDCDEGGEYDGMQDEPRYMML 668
>BC032665-1|AAH32665.1| 725|Homo sapiens EEF2K protein protein.
Length = 725
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 306 DWLKSNYWKEHKLLITDYKSGRQETDSQEETRVMIL 413
DWL++ +W L +TD G + Q+E R M+L
Sbjct: 633 DWLEALHWYNTALEMTDCDEGGEYDGMQDEPRYMML 668
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,471,627
Number of Sequences: 237096
Number of extensions: 1613490
Number of successful extensions: 3769
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3760
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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