Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30903
(696 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P0AFH5 Cluster: Oligopeptide transport system permease ... 138 9e-32
UniRef50_P45054 Cluster: Oligopeptide transport system permease ... 113 5e-24
UniRef50_P06202 Cluster: Periplasmic oligopeptide-binding protei... 85 1e-15
UniRef50_Q7NDV7 Cluster: Oligopeptide ABC transporter permease p... 79 1e-13
UniRef50_P24138 Cluster: Oligopeptide transport system permease ... 78 2e-13
UniRef50_O31307 Cluster: Oligopeptide permease homolog B; n=3; B... 72 1e-11
UniRef50_Q87Q04 Cluster: Oligopeptide ABC transporter, permease ... 71 3e-11
UniRef50_Q8YBZ9 Cluster: OLIGOPEPTIDE TRANSPORT SYSTEM PERMEASE ... 70 5e-11
UniRef50_Q28MU4 Cluster: Binding-protein-dependent transport sys... 69 8e-11
UniRef50_A3EPF6 Cluster: Putative oligopeptide ABC transporter; ... 69 1e-10
UniRef50_Q97D42 Cluster: Oligopeptide ABC transporter, permease ... 65 2e-09
UniRef50_Q62DS1 Cluster: Oligopeptide ABC transporter, permease ... 64 2e-09
UniRef50_Q3A9M3 Cluster: Oligopeptide ABC transporter, permease ... 64 2e-09
UniRef50_A0Q887 Cluster: Peptide/opine/nickel uptake transporter... 64 2e-09
UniRef50_Q49WC0 Cluster: ABC-type dipeptide oligopeptide nickel ... 62 1e-08
UniRef50_Q8KBZ9 Cluster: Peptide ABC transporter, permease prote... 61 3e-08
UniRef50_Q88XE6 Cluster: Oligopeptide ABC transporter, permease ... 61 3e-08
UniRef50_Q28M48 Cluster: Binding-protein-dependent transport sys... 60 4e-08
UniRef50_Q97D49 Cluster: Oligopeptide ABC transporter, permease ... 60 7e-08
UniRef50_Q7UHZ1 Cluster: Oligopeptide transport system permease ... 59 9e-08
UniRef50_A5KJC9 Cluster: Putative uncharacterized protein; n=1; ... 58 2e-07
UniRef50_Q81TS3 Cluster: Oligopeptide ABC transporter, permease ... 57 5e-07
UniRef50_A5WBD9 Cluster: Extracellular solute-binding protein, f... 56 8e-07
UniRef50_A1AYK8 Cluster: Binding-protein-dependent transport sys... 56 8e-07
UniRef50_Q7AP39 Cluster: Lin0183 protein; n=18; Firmicutes|Rep: ... 54 3e-06
UniRef50_Q0LGE8 Cluster: Binding-protein-dependent transport sys... 54 3e-06
UniRef50_A6DGV5 Cluster: ABC-type dipeptide/oligopeptide/nickel ... 54 3e-06
UniRef50_A4AFM8 Cluster: Dipeptide ABC transporter, permease pro... 54 3e-06
UniRef50_Q8ELZ5 Cluster: Oligopeptide ABC transporter permease; ... 54 4e-06
UniRef50_Q87FE0 Cluster: Oligopeptide ABC transporter, periplasm... 54 4e-06
UniRef50_Q7VVH4 Cluster: ABC-transport protein, inner membrane c... 52 1e-05
UniRef50_Q48E35 Cluster: Peptide ABC transporter, permease prote... 52 1e-05
UniRef50_Q0ER61 Cluster: Binding-protein-dependent transport sys... 52 1e-05
UniRef50_Q822S7 Cluster: Peptide ABC transporter, permease prote... 52 1e-05
UniRef50_Q73QP9 Cluster: Oligopeptide/dipeptide ABC transporter,... 52 1e-05
UniRef50_A7B6V9 Cluster: Putative uncharacterized protein; n=1; ... 52 1e-05
UniRef50_P0AFU1 Cluster: Inner membrane ABC transporter permease... 42 3e-05
UniRef50_Q9KGM9 Cluster: Oligopeptide ABC transporter; n=8; Firm... 51 3e-05
UniRef50_O66777 Cluster: Transporter; n=2; Aquifex aeolicus|Rep:... 51 3e-05
UniRef50_A1SP55 Cluster: Binding-protein-dependent transport sys... 50 5e-05
UniRef50_A0JYI2 Cluster: Binding-protein-dependent transport sys... 50 5e-05
UniRef50_A7JXR1 Cluster: Bacterial extracellular solute-binding ... 50 7e-05
UniRef50_Q73Q05 Cluster: Oligopeptide/dipeptide ABC transporter,... 49 1e-04
UniRef50_Q8RTF5 Cluster: OppB; n=15; Lactobacillales|Rep: OppB -... 49 1e-04
UniRef50_Q1AXP5 Cluster: Twin-arginine translocation pathway sig... 49 1e-04
UniRef50_A5FQK1 Cluster: Nickel-transporting ATPase; n=2; Dehalo... 49 1e-04
UniRef50_Q5LPN3 Cluster: Peptide/nickel/opine uptake family ABC ... 49 1e-04
UniRef50_A6X471 Cluster: Binding-protein-dependent transport sys... 49 1e-04
UniRef50_Q930F4 Cluster: Putative ABC transporter, permease; n=1... 48 2e-04
UniRef50_Q81UG5 Cluster: Oligopeptide ABC transporter, permease ... 48 2e-04
UniRef50_Q7P899 Cluster: Dipeptide transport system permease pro... 48 2e-04
UniRef50_A4W8Y3 Cluster: Extracellular solute-binding protein, f... 48 2e-04
UniRef50_A5US99 Cluster: Binding-protein-dependent transport sys... 48 2e-04
UniRef50_A7BKM5 Cluster: Peptide ABC transporter, permease prote... 48 3e-04
UniRef50_A6M0G0 Cluster: Binding-protein-dependent transport sys... 47 4e-04
UniRef50_O28506 Cluster: Dipeptide ABC transporter, permease pro... 47 4e-04
UniRef50_Q9CMX3 Cluster: Putative uncharacterized protein PM0678... 47 5e-04
UniRef50_Q46863 Cluster: Putative binding protein ygiS precursor... 47 5e-04
UniRef50_Q8YVG6 Cluster: Permease protein of ABC transporter; n=... 46 7e-04
UniRef50_A4M636 Cluster: Binding-protein-dependent transport sys... 46 7e-04
UniRef50_P0A4N7 Cluster: Oligopeptide transport system permease ... 46 7e-04
UniRef50_P42062 Cluster: Oligopeptide transport system permease ... 46 7e-04
UniRef50_Q67T60 Cluster: Oligopeptide ABC transporter permease p... 46 9e-04
UniRef50_A5WXU5 Cluster: LecB; n=6; Proteobacteria|Rep: LecB - A... 46 9e-04
UniRef50_P77348 Cluster: Periplasmic murein peptide-binding prot... 46 9e-04
UniRef50_Q2JN44 Cluster: OppBC ABC transporter family, permease ... 46 0.001
UniRef50_Q11FQ8 Cluster: Binding-protein-dependent transport sys... 46 0.001
UniRef50_A4W6W0 Cluster: Binding-protein-dependent transport sys... 46 0.001
UniRef50_Q2K5M4 Cluster: Oligopeptide ABC transporter, substrate... 45 0.002
UniRef50_Q2CEF5 Cluster: Peptide ABC transporter, permease prote... 45 0.002
UniRef50_Q18QN7 Cluster: Binding-protein-dependent transport sys... 45 0.002
UniRef50_Q11BX9 Cluster: Binding-protein-dependent transport sys... 45 0.002
UniRef50_A5N711 Cluster: OppB; n=1; Clostridium kluyveri DSM 555... 45 0.002
UniRef50_A1S0Q2 Cluster: Binding-protein-dependent transport sys... 45 0.002
UniRef50_Q9RU25 Cluster: Peptide ABC transporter, permease prote... 45 0.002
UniRef50_A6NZV2 Cluster: Putative uncharacterized protein; n=1; ... 45 0.002
UniRef50_Q2SMW9 Cluster: ABC-type oligopeptide transport system,... 44 0.003
UniRef50_Q9YFD8 Cluster: ABC transporter, permease protein; n=1;... 44 0.003
UniRef50_Q2FMZ9 Cluster: Binding-protein-dependent transport sys... 44 0.003
UniRef50_Q87Q03 Cluster: Oligopeptide ABC transporter, periplasm... 44 0.004
UniRef50_Q74D85 Cluster: Peptide ABC transporter, permease prote... 44 0.004
UniRef50_A0KJT1 Cluster: Periplasmic murein peptide-binding prot... 44 0.004
UniRef50_Q9RYU7 Cluster: Peptide ABC transporter, permease prote... 44 0.005
UniRef50_Q6YR28 Cluster: ABC-type dipeptide/oligopeptide transpo... 44 0.005
UniRef50_Q65LC9 Cluster: AppB; n=1; Bacillus licheniformis ATCC ... 44 0.005
UniRef50_Q0I2I9 Cluster: Oligopeptide transporter, periplasmic-b... 44 0.005
UniRef50_A0NZ98 Cluster: D-ala-D-ala transporter subunit; n=1; S... 44 0.005
UniRef50_A0LI52 Cluster: Binding-protein-dependent transport sys... 44 0.005
UniRef50_A0JTR1 Cluster: Binding-protein-dependent transport sys... 44 0.005
UniRef50_Q62DS2 Cluster: Oligopeptide ABC transporter, periplasm... 43 0.006
UniRef50_Q28MU5 Cluster: Extracellular solute-binding protein fa... 43 0.006
UniRef50_A7BDU5 Cluster: Putative uncharacterized protein; n=1; ... 43 0.006
UniRef50_P44572 Cluster: Putative binding protein HI0213 precurs... 43 0.008
UniRef50_Q97D46 Cluster: Oligopeptide ABC transporter, periplasm... 42 0.011
UniRef50_Q89RA5 Cluster: ABC transporter permease protein; n=2; ... 42 0.011
UniRef50_Q67KR8 Cluster: Oligopeptide ABC transporter permease p... 42 0.011
UniRef50_A6TPV5 Cluster: Binding-protein-dependent transport sys... 42 0.011
UniRef50_A5NUI3 Cluster: Extracellular solute-binding protein, f... 42 0.011
UniRef50_A4ALV3 Cluster: ABC transporter, membrane spanning prot... 42 0.011
UniRef50_A4AFN4 Cluster: Putative ABC transporter, permease; n=1... 42 0.011
UniRef50_A3I7A4 Cluster: Oligopeptide ABC transporter, permease;... 42 0.011
UniRef50_A3EWA7 Cluster: ABC-type oligopeptide transport system,... 42 0.011
UniRef50_A2TW67 Cluster: Dipeptide ABC transporter; n=7; Bactero... 42 0.011
UniRef50_Q18K39 Cluster: ABC-type dipeptide/oligopeptide/nickel ... 42 0.011
UniRef50_A7CU81 Cluster: Extracellular solute-binding protein fa... 42 0.014
UniRef50_A5ZYP1 Cluster: Putative uncharacterized protein; n=1; ... 42 0.014
UniRef50_Q8RC38 Cluster: ABC-type dipeptide/oligopeptide/nickel ... 42 0.019
UniRef50_Q8KJ79 Cluster: PUTATIVE ABC TRANSPORTER PERMEASE PROTE... 42 0.019
UniRef50_A4N522 Cluster: Dipeptide transporter ATP-binding prote... 42 0.019
UniRef50_P33591 Cluster: Nickel transport system permease protei... 42 0.019
UniRef50_P45096 Cluster: Dipeptide transport system permease pro... 42 0.019
UniRef50_Q989T3 Cluster: ABC transporter, permease protein; n=2;... 41 0.025
UniRef50_A6FAC7 Cluster: Peptide ABC transporter, permease prote... 41 0.025
UniRef50_A5ZY64 Cluster: Putative uncharacterized protein; n=1; ... 41 0.025
UniRef50_A0JYT0 Cluster: Binding-protein-dependent transport sys... 41 0.025
UniRef50_Q5V0Q6 Cluster: Oligopeptide ABC transporter permease p... 41 0.025
UniRef50_Q894Y0 Cluster: Transport system permease, nickel or di... 41 0.033
UniRef50_Q577U3 Cluster: Oligopeptide ABC transporter, periplasm... 41 0.033
UniRef50_Q0FSN8 Cluster: Peptide ABC transporter, permease prote... 40 0.044
UniRef50_A6W3M0 Cluster: Extracellular solute-binding protein fa... 40 0.044
UniRef50_A5EVS7 Cluster: Oligopeptide transport protein; n=1; Di... 40 0.044
UniRef50_Q89KL0 Cluster: ABC transporter permease protein; n=5; ... 40 0.058
UniRef50_Q6AP16 Cluster: Probable oligopeptide ABC transporter, ... 40 0.058
UniRef50_Q9ADY0 Cluster: DfpB; n=3; Agrobacterium tumefaciens|Re... 40 0.058
UniRef50_Q15RH3 Cluster: Binding-protein-dependent transport sys... 40 0.058
UniRef50_A7NQN7 Cluster: Binding-protein-dependent transport sys... 40 0.058
UniRef50_A4ECM8 Cluster: Putative uncharacterized protein; n=1; ... 40 0.058
UniRef50_A3VG50 Cluster: Dipeptide transport system permease pro... 40 0.058
UniRef50_Q8YDG7 Cluster: Putative peptide transport system perme... 40 0.058
UniRef50_Q8ZQM2 Cluster: Glutathione transport system permease p... 40 0.058
UniRef50_Q83N24 Cluster: Dipeptide transport system permease pro... 40 0.077
UniRef50_Q5FMI1 Cluster: Peptide binding protein; n=8; Lactobaci... 40 0.077
UniRef50_A7CZU2 Cluster: Extracellular solute-binding protein fa... 40 0.077
UniRef50_A4IPU6 Cluster: ABC transporter; n=1; Geobacillus therm... 40 0.077
UniRef50_Q8TN12 Cluster: Peptide ABC transporter, permease prote... 40 0.077
UniRef50_Q73N80 Cluster: Oligopeptide/dipeptide ABC transporter,... 39 0.10
UniRef50_Q65SX8 Cluster: OppA protein; n=1; Mannheimia succinici... 39 0.10
UniRef50_Q2JB54 Cluster: Binding-protein-dependent transport sys... 39 0.10
UniRef50_Q0SBH3 Cluster: ABC peptide transporter, permease compo... 39 0.10
UniRef50_Q0RID9 Cluster: ABC transporter permease; n=2; Frankia ... 39 0.10
UniRef50_A1HNQ4 Cluster: Binding-protein-dependent transport sys... 39 0.10
UniRef50_Q18KK8 Cluster: ABC-type dipeptide/oligopeptide/nickel ... 39 0.10
UniRef50_P36634 Cluster: Peptide transport periplasmic protein s... 39 0.10
UniRef50_Q8UKN0 Cluster: ABC transporter, membrane spanning prot... 39 0.13
UniRef50_Q7M9E2 Cluster: NICKEL TRANSPORT SYSTEM PERMEASE; n=2; ... 39 0.13
UniRef50_Q41GQ8 Cluster: Extracellular solute-binding protein, f... 39 0.13
UniRef50_Q1QT65 Cluster: Extracellular solute-binding protein, f... 39 0.13
UniRef50_Q1LMX8 Cluster: Binding-protein-dependent transport sys... 39 0.13
UniRef50_Q53191 Cluster: Probable peptide ABC transporter permea... 39 0.13
UniRef50_Q8DPF3 Cluster: ABC transporter membrane-spanning perme... 38 0.18
UniRef50_Q89VQ3 Cluster: Peptide ABC transporter permease protei... 38 0.18
UniRef50_Q5WKK0 Cluster: Oligopeptide ABC transporter permease; ... 38 0.18
UniRef50_A5FXR6 Cluster: Binding-protein-dependent transport sys... 38 0.18
UniRef50_Q978R0 Cluster: ABC transport system permease protein P... 38 0.18
UniRef50_Q2FH55 Cluster: Putative oligopeptide transport system ... 38 0.18
UniRef50_Q9WZ02 Cluster: Oligopeptide ABC transporter, permease ... 38 0.24
UniRef50_Q9KBX7 Cluster: Nickel ABC transporter; n=2; Bacillus|R... 38 0.24
UniRef50_Q8EUP3 Cluster: Oligopeptide ABC transporter permease p... 38 0.24
UniRef50_Q3E296 Cluster: Binding-protein-dependent transport sys... 38 0.24
UniRef50_Q3E221 Cluster: Binding-protein-dependent transport sys... 38 0.24
UniRef50_Q12DJ8 Cluster: Binding-protein-dependent transport sys... 38 0.24
UniRef50_Q0SEK6 Cluster: ABC peptide transporter, permease compo... 38 0.24
UniRef50_Q0LIZ3 Cluster: Extracellular solute-binding protein, f... 38 0.24
UniRef50_Q0LEX9 Cluster: Binding-protein-dependent transport sys... 38 0.24
UniRef50_A3ZYC1 Cluster: Oligopeptide-binding protein OppA; n=1;... 38 0.24
UniRef50_Q8THB7 Cluster: Oligopeptide ABC transporter, permease ... 38 0.24
UniRef50_Q6MQU8 Cluster: Peptide ABC transporter, permease prote... 38 0.31
UniRef50_Q30Y57 Cluster: Oligopeptide ABC transporter, permease ... 38 0.31
UniRef50_Q3VYQ6 Cluster: Binding-protein-dependent transport sys... 38 0.31
UniRef50_A0KM52 Cluster: Periplasmic murein peptide-binding prot... 38 0.31
UniRef50_A7D4N6 Cluster: Binding-protein-dependent transport sys... 38 0.31
UniRef50_P47323 Cluster: Oligopeptide transport system permease ... 38 0.31
UniRef50_Q9KB56 Cluster: Oligopeptide ABC transporter; n=16; Bac... 37 0.41
UniRef50_Q98BT0 Cluster: ABC transporter, permease protein; n=5;... 37 0.41
UniRef50_Q8UAE0 Cluster: ABC transporter, membrane spanning prot... 37 0.41
UniRef50_Q5LQD7 Cluster: Peptide/opine/nickel uptake family ABC ... 37 0.41
UniRef50_Q0ARC9 Cluster: Extracellular solute-binding protein, f... 37 0.41
UniRef50_A6X7U7 Cluster: Binding-protein-dependent transport sys... 37 0.41
UniRef50_A6WCC2 Cluster: Binding-protein-dependent transport sys... 37 0.41
UniRef50_A6TTE0 Cluster: Binding-protein-dependent transport sys... 37 0.41
UniRef50_A6PPR1 Cluster: Binding-protein-dependent transport sys... 37 0.41
UniRef50_A6NWH3 Cluster: Putative uncharacterized protein; n=1; ... 37 0.41
UniRef50_Q89FI7 Cluster: Bll6713 protein; n=5; Alphaproteobacter... 37 0.54
UniRef50_Q6MJQ9 Cluster: Oligopeptide ABC transporter, permease ... 37 0.54
UniRef50_Q6DB27 Cluster: ABC transporter permease protein; n=13;... 37 0.54
UniRef50_A7BVC4 Cluster: Oligopeptide ABC transporter periplasmi... 37 0.54
UniRef50_A3EQ60 Cluster: Putative oligopeptide ABC transporter; ... 37 0.54
UniRef50_Q985N6 Cluster: ABC transporter, peptide-binding protei... 36 0.72
UniRef50_Q8G560 Cluster: Similar to ABC transporter permease pro... 36 0.72
UniRef50_Q839T9 Cluster: Pheromone binding protein, putative; n=... 36 0.72
UniRef50_Q3W1D2 Cluster: Binding-protein-dependent transport sys... 36 0.72
UniRef50_Q213C0 Cluster: Binding-protein-dependent transport sys... 36 0.72
UniRef50_Q1ATC7 Cluster: Twin-arginine translocation pathway sig... 36 0.72
UniRef50_A1R300 Cluster: Putative ABC-type dipeptide/oligopeptid... 36 0.72
UniRef50_Q8TTX4 Cluster: Oligopeptide ABC transporter, permease ... 36 0.72
UniRef50_Q8REI9 Cluster: Dipeptide transport system permease pro... 36 0.95
UniRef50_Q8RD25 Cluster: ABC-type dipeptide/oligopeptide/nickel ... 36 0.95
UniRef50_Q5WLH9 Cluster: Dipeptide/oligopeptide/nickel ABC trans... 36 0.95
UniRef50_Q039X9 Cluster: ABC-type oligopeptide transport system,... 36 0.95
UniRef50_A7NQN2 Cluster: Binding-protein-dependent transport sys... 36 0.95
UniRef50_A6Q534 Cluster: Oligopeptide ABC transporter, permease;... 36 0.95
UniRef50_A0LTX9 Cluster: Binding-protein-dependent transport sys... 36 0.95
UniRef50_Q979C6 Cluster: TVG1271204 protein; n=3; cellular organ... 36 0.95
UniRef50_A2SPU1 Cluster: Binding-protein-dependent transport sys... 36 0.95
UniRef50_Q57G03 Cluster: ABC transporter, permease protein; n=12... 36 1.3
UniRef50_Q41AC0 Cluster: Extracellular solute-binding protein, f... 36 1.3
UniRef50_A4ABG7 Cluster: Periplasmic oligopeptide-binding protei... 36 1.3
UniRef50_A3ULH0 Cluster: Oligopeptide ABC transporter, periplasm... 36 1.3
UniRef50_A3PFV5 Cluster: Binding-protein-dependent transport sys... 36 1.3
UniRef50_Q0V1W3 Cluster: Putative uncharacterized protein; n=1; ... 36 1.3
UniRef50_Q9HLG5 Cluster: Dipeptide transport system permease pro... 36 1.3
UniRef50_Q5V091 Cluster: Dipeptide ABC transporter permease; n=5... 36 1.3
UniRef50_Q6D2Y2 Cluster: ABC transporter permease protein; n=2; ... 35 1.7
UniRef50_Q2RWU9 Cluster: Extracellular solute-binding protein, f... 35 1.7
UniRef50_Q52188 Cluster: TraC precursor; n=9; root|Rep: TraC pre... 35 1.7
UniRef50_A6SUK8 Cluster: ABC-type transport systems, permease co... 35 1.7
UniRef50_A6CW01 Cluster: Putative permease component of ABC tran... 35 1.7
UniRef50_A5I1J0 Cluster: ABC transporter, permease protein; n=4;... 35 1.7
UniRef50_A3Y4Z9 Cluster: Oligopeptide ABC transporter, permease ... 35 1.7
UniRef50_A3I5Z0 Cluster: Oligopeptide ABC transporter, permease ... 35 1.7
UniRef50_A0KDN1 Cluster: Binding-protein-dependent transport sys... 35 1.7
UniRef50_A0EA61 Cluster: Chromosome undetermined scaffold_85, wh... 35 1.7
UniRef50_UPI000045D6B0 Cluster: COG4166: ABC-type oligopeptide t... 35 2.2
UniRef50_Q88YI1 Cluster: Lipoprotein, peptide binding protein Op... 35 2.2
UniRef50_Q7NQ13 Cluster: Probable oligopeptide ABC transporter s... 35 2.2
UniRef50_Q2J9B6 Cluster: Binding-protein-dependent transport sys... 35 2.2
UniRef50_Q9F1J4 Cluster: TraC protein; n=1; Enterococcus faecali... 35 2.2
UniRef50_Q11EZ9 Cluster: Binding-protein-dependent transport sys... 35 2.2
UniRef50_A7JPR1 Cluster: Oligopeptide ABC superfamily ATP bindin... 35 2.2
UniRef50_Q9WXN7 Cluster: Oligopeptide ABC transporter, permease ... 34 2.9
UniRef50_Q6MF23 Cluster: Putative dipeptide transport system per... 34 2.9
UniRef50_Q6M2I9 Cluster: ABC-type dipeptide/oligopeptide/nickel ... 34 2.9
UniRef50_Q2FZQ9 Cluster: Oligopeptide ABC transporter, permease ... 34 2.9
UniRef50_A7DFI1 Cluster: Putative uncharacterized protein; n=5; ... 34 2.9
UniRef50_A6VND4 Cluster: 4-phytase precursor; n=1; Actinobacillu... 34 2.9
UniRef50_A4XIB1 Cluster: Extracellular solute-binding protein, f... 34 2.9
UniRef50_A3TIW1 Cluster: ABC transporter permease protein; n=1; ... 34 2.9
UniRef50_A3CL90 Cluster: Nickel ABC transporter, putative; n=1; ... 34 2.9
UniRef50_Q8YVF5 Cluster: All2023 protein; n=1; Nostoc sp. PCC 71... 34 3.8
UniRef50_Q890D5 Cluster: Extracellular protein, peptide binding ... 34 3.8
UniRef50_Q1N1H0 Cluster: Extracellular solute-binding protein, f... 34 3.8
UniRef50_Q11DM1 Cluster: Binding-protein-dependent transport sys... 34 3.8
UniRef50_A3IE85 Cluster: Permease protein of oligopeptide ABC tr... 34 3.8
UniRef50_A2SM58 Cluster: IM pore protein; n=4; Proteobacteria|Re... 34 3.8
UniRef50_A1SXD6 Cluster: ABC transporter D-Ala-D-Ala-binding inn... 34 3.8
UniRef50_A1FX51 Cluster: Glycosyl transferase, family 2; n=1; St... 34 3.8
UniRef50_Q8TLI7 Cluster: Oligopeptide ABC transporter, permease ... 34 3.8
UniRef50_A7IAY1 Cluster: Binding-protein-dependent transport sys... 34 3.8
UniRef50_Q9X269 Cluster: Oligopeptide ABC transporter, permease ... 33 5.1
UniRef50_Q8NN85 Cluster: ABC-type transporter, permease componen... 33 5.1
UniRef50_Q8EVK8 Cluster: Oligopeptide transport system permease ... 33 5.1
UniRef50_Q837M9 Cluster: Pheromone binding protein, putative; n=... 33 5.1
UniRef50_Q824K2 Cluster: Peptide ABC transporter, permease prote... 33 5.1
UniRef50_Q7WJY0 Cluster: ABC transport protein inner membrane co... 33 5.1
UniRef50_Q7NM21 Cluster: Gll0948 protein; n=2; Gloeobacter viola... 33 5.1
UniRef50_Q5FJS3 Cluster: Pheromone-peptide binding protein; n=5;... 33 5.1
UniRef50_Q1FG01 Cluster: Binding-protein-dependent transport sys... 33 5.1
UniRef50_A5FRP2 Cluster: Extracellular solute-binding protein, f... 33 5.1
UniRef50_A4FBS5 Cluster: Putative peptide transport system perme... 33 5.1
UniRef50_A1WRD7 Cluster: Binding-protein-dependent transport sys... 33 5.1
UniRef50_Q8PU83 Cluster: Dipeptide/oligopeptide transporter, per... 33 5.1
UniRef50_UPI00015B9851 Cluster: UPI00015B9851 related cluster; n... 33 6.7
UniRef50_Q81UG6 Cluster: Oligopeptide ABC transporter, oligopept... 33 6.7
UniRef50_Q47XM7 Cluster: Peptide ABC transporter, permease prote... 33 6.7
UniRef50_Q2CGQ4 Cluster: Dipeptide transport system permease pro... 33 6.7
UniRef50_Q1ARP2 Cluster: Binding-protein-dependent transport sys... 33 6.7
UniRef50_Q123K0 Cluster: Binding-protein-dependent transport sys... 33 6.7
UniRef50_A6LKH9 Cluster: Binding-protein-dependent transport sys... 33 6.7
UniRef50_A6FIJ5 Cluster: Putative uncharacterized protein; n=1; ... 33 6.7
UniRef50_A6F4W7 Cluster: ABC-type oligopeptide transport system,... 33 6.7
UniRef50_Q8U120 Cluster: Dipeptide transport system permease pro... 33 6.7
UniRef50_Q8Q0X6 Cluster: Dipeptide ABC transporter, permease pro... 33 6.7
UniRef50_Q4J9Y5 Cluster: Peptide transport system permease prote... 33 6.7
UniRef50_UPI00004DBA72 Cluster: UPI00004DBA72 related cluster; n... 33 8.8
UniRef50_Q9X1C0 Cluster: Aspartate aminotransferase, putative; n... 33 8.8
UniRef50_Q8Z0F6 Cluster: Permease protein of oligopeptide ABC tr... 33 8.8
UniRef50_Q8EYI6 Cluster: Dipeptide transport system permease pro... 33 8.8
UniRef50_Q8CJQ7 Cluster: Putative peptide transport system perme... 33 8.8
UniRef50_Q89PZ2 Cluster: ABC transporter permease protein; n=10;... 33 8.8
UniRef50_Q895A2 Cluster: Putative permease, nickel or dipeptide ... 33 8.8
UniRef50_Q1DDX0 Cluster: NAD dependent epimerase/dehydratase fam... 33 8.8
UniRef50_A5VD32 Cluster: 4-phytase precursor; n=1; Sphingomonas ... 33 8.8
UniRef50_A3XMN0 Cluster: Oligopeptide ABC transporter substrate-... 33 8.8
UniRef50_A1WNE2 Cluster: Binding-protein-dependent transport sys... 33 8.8
>UniRef50_P0AFH5 Cluster: Oligopeptide transport system permease
protein oppB; n=75; Bacteria|Rep: Oligopeptide transport
system permease protein oppB - Shigella flexneri
Length = 306
Score = 138 bits (335), Expect = 9e-32
Identities = 70/80 (87%), Positives = 71/80 (88%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPPEVMANIEAKYHLNDPIM 573
MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGE TLPPEVMANIEAKYHLNDPIM
Sbjct: 1 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGERTLPPEVMANIEAKYHLNDPIM 60
Query: 574 TQYFQLPENNWAHG*FSGPS 633
TQYF + AHG F GPS
Sbjct: 61 TQYFSYLK-QLAHGDF-GPS 78
>UniRef50_P45054 Cluster: Oligopeptide transport system permease
protein oppB; n=19; Gammaproteobacteria|Rep:
Oligopeptide transport system permease protein oppB -
Haemophilus influenzae
Length = 306
Score = 113 bits (271), Expect = 5e-24
Identities = 57/80 (71%), Positives = 63/80 (78%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPPEVMANIEAKYHLNDPIM 573
MLKFI +R LEA+PTLFILIT SFF+MRLAPGSPFT E PPEVMANIEAKYHLN+P+
Sbjct: 1 MLKFIFKRLLEALPTLFILITFSFFLMRLAPGSPFTSERAYPPEVMANIEAKYHLNEPLY 60
Query: 574 TQYFQLPENNWAHG*FSGPS 633
QYF E N + G F GPS
Sbjct: 61 KQYFLYLE-NLSKGDF-GPS 78
>UniRef50_P06202 Cluster: Periplasmic oligopeptide-binding protein
precursor; n=115; Gammaproteobacteria|Rep: Periplasmic
oligopeptide-binding protein precursor - Salmonella
typhimurium
Length = 543
Score = 85.4 bits (202), Expect = 1e-15
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAETLKVTDE 133
WCADYNEPTSFLNTMLS+SS NTAHYKSPAFD ++A+TLKV D+
Sbjct: 442 WCADYNEPTSFLNTMLSDSSNNTAHYKSPAFDKLIADTLKVADD 485
Score = 83.8 bits (198), Expect = 4e-15
Identities = 37/40 (92%), Positives = 38/40 (95%)
Frame = +1
Query: 139 RTALYTKAEQQLDKDSAIVPVYYYVNARLVKPWVGGYTGK 258
R+ LY KAEQQLDKDSAIVPVYYYVNARLVKPWVGGYTGK
Sbjct: 488 RSELYAKAEQQLDKDSAIVPVYYYVNARLVKPWVGGYTGK 527
Score = 35.1 bits (77), Expect = 1.7
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +3
Query: 255 KDPLDNTYTRNMYIVKH 305
KDPLDN Y +N+YI+KH
Sbjct: 527 KDPLDNIYVKNLYIIKH 543
>UniRef50_Q7NDV7 Cluster: Oligopeptide ABC transporter permease
protein; n=1; Gloeobacter violaceus|Rep: Oligopeptide
ABC transporter permease protein - Gloeobacter violaceus
Length = 306
Score = 79.0 bits (186), Expect = 1e-13
Identities = 36/64 (56%), Positives = 45/64 (70%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPPEVMANIEAKYHLNDPIM 573
ML FILRR L AIP L +++TISFF++RLAPG PF E PP V+ + AKY L+ P+
Sbjct: 1 MLNFILRRLLFAIPVLLVVVTISFFLVRLAPGGPFMEERAYPPAVIEKLNAKYGLDKPLH 60
Query: 574 TQYF 585
QYF
Sbjct: 61 EQYF 64
>UniRef50_P24138 Cluster: Oligopeptide transport system permease
protein oppB; n=25; Firmicutes|Rep: Oligopeptide
transport system permease protein oppB - Bacillus
subtilis
Length = 311
Score = 78.2 bits (184), Expect = 2e-13
Identities = 33/63 (52%), Positives = 47/63 (74%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPPEVMANIEAKYHLNDPIM 573
MLK+I RR + I TLF+++T++FF+M+ APG PF+GE LPPE+ AN+ A Y L+ P+
Sbjct: 1 MLKYIGRRLVYMIITLFVIVTVTFFLMQAAPGGPFSGEKKLPPEIEANLNAHYGLDKPLF 60
Query: 574 TQY 582
QY
Sbjct: 61 VQY 63
>UniRef50_O31307 Cluster: Oligopeptide permease homolog B; n=3;
Borrelia burgdorferi group|Rep: Oligopeptide permease
homolog B - Borrelia burgdorferi (Lyme disease
spirochete)
Length = 306
Score = 72.1 bits (169), Expect = 1e-11
Identities = 32/64 (50%), Positives = 43/64 (67%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPPEVMANIEAKYHLNDPIM 573
MLKF L++ L IPTL ++I + FF+MR+APGSPF E + P+V A + KYHL+ P
Sbjct: 1 MLKFTLKKILGIIPTLLVIIFLCFFVMRMAPGSPFDSEKPIDPQVKARLMEKYHLDKPFY 60
Query: 574 TQYF 585
Q F
Sbjct: 61 IQAF 64
>UniRef50_Q87Q04 Cluster: Oligopeptide ABC transporter, permease
protein; n=23; Gammaproteobacteria|Rep: Oligopeptide ABC
transporter, permease protein - Vibrio parahaemolyticus
Length = 306
Score = 70.9 bits (166), Expect = 3e-11
Identities = 30/64 (46%), Positives = 45/64 (70%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPPEVMANIEAKYHLNDPIM 573
M+ +ILRR A+PTL + +SF++M +APG PF E +P V ANIEAK+HL++P +
Sbjct: 1 MIWYILRRLAIAVPTLLFIALVSFWLMHIAPGGPFDMERPMPEIVRANIEAKFHLDEPFL 60
Query: 574 TQYF 585
Q++
Sbjct: 61 VQFW 64
>UniRef50_Q8YBZ9 Cluster: OLIGOPEPTIDE TRANSPORT SYSTEM PERMEASE
PROTEIN OPPB; n=18; Proteobacteria|Rep: OLIGOPEPTIDE
TRANSPORT SYSTEM PERMEASE PROTEIN OPPB - Brucella
melitensis
Length = 317
Score = 70.1 bits (164), Expect = 5e-11
Identities = 38/92 (41%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPPEVMANIEAKYHLNDPIM 573
ML + LRR AIPT+FI+IT++FF++RLAPG PF E + P ++ N++ Y+++ P+
Sbjct: 11 MLGYTLRRLGSAIPTIFIIITLTFFLIRLAPGGPFDLERPIDPLILENLKKAYNMDAPLW 70
Query: 574 TQYFQLPENNWAHG*FSGPS----XLNIKDLF 657
QY + N HG GPS + DLF
Sbjct: 71 QQYL-IYLGNLLHGDL-GPSFTRRDFTVNDLF 100
>UniRef50_Q28MU4 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=34;
Proteobacteria|Rep: Binding-protein-dependent transport
systems inner membrane component - Jannaschia sp.
(strain CCS1)
Length = 307
Score = 69.3 bits (162), Expect = 8e-11
Identities = 32/62 (51%), Positives = 42/62 (67%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPPEVMANIEAKYHLNDPIM 573
M FIL+R L AIP L ILI ++F +M APGSPF E +PP V+AN+E +Y L+ P +
Sbjct: 1 MAAFILKRILVAIPVLLILIVLTFVLMYAAPGSPFASERGVPPAVLANLEREYGLDRPFL 60
Query: 574 TQ 579
Q
Sbjct: 61 AQ 62
>UniRef50_A3EPF6 Cluster: Putative oligopeptide ABC transporter;
n=1; Leptospirillum sp. Group II UBA|Rep: Putative
oligopeptide ABC transporter - Leptospirillum sp. Group
II UBA
Length = 303
Score = 68.5 bits (160), Expect = 1e-10
Identities = 35/90 (38%), Positives = 55/90 (61%), Gaps = 4/90 (4%)
Frame = +1
Query: 406 ILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPPEVMANIEAKYHLNDPIMTQYF 585
I+RR L +I ++ + T++FF+ R APGSPF GE LPPE+M +I A YHL+ P+ QY+
Sbjct: 4 IVRRFLASILLVWAVFTLTFFLSRWAPGSPFQGERKLPPEIMRSILAYYHLDRPLPVQYW 63
Query: 586 QLPE----NNWAHG*FSGPSXLNIKDLFGQ 663
+ + +W F P + + ++ GQ
Sbjct: 64 EALKKTAMGDWGSS-FKNPG-IRVSEIIGQ 91
>UniRef50_Q97D42 Cluster: Oligopeptide ABC transporter, permease
component; n=9; Clostridiales|Rep: Oligopeptide ABC
transporter, permease component - Clostridium
acetobutylicum
Length = 306
Score = 64.9 bits (151), Expect = 2e-09
Identities = 26/63 (41%), Positives = 44/63 (69%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPPEVMANIEAKYHLNDPIM 573
M ++I++R + +I TL+I++T +F + PG PFT E LPP + AN++AK+ L+ P+
Sbjct: 1 MFRYIIKRFIASIVTLWIVVTFTFLLAHAIPGGPFTSEKKLPPAIEANLKAKFGLDKPLG 60
Query: 574 TQY 582
+QY
Sbjct: 61 SQY 63
>UniRef50_Q62DS1 Cluster: Oligopeptide ABC transporter, permease
protein; n=28; Betaproteobacteria|Rep: Oligopeptide ABC
transporter, permease protein - Burkholderia mallei
(Pseudomonas mallei)
Length = 312
Score = 64.5 bits (150), Expect = 2e-09
Identities = 32/80 (40%), Positives = 46/80 (57%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPPEVMANIEAKYHLNDPIM 573
ML + LRR L A+PT+ ++T+ + ++ PG PF E L +AN+ AKYHL++P
Sbjct: 1 MLAYALRRTLWAVPTILAVVTVCYLLLHFTPGGPFDSEKQLSAATLANLNAKYHLDEPRW 60
Query: 574 TQYFQLPENNWAHG*FSGPS 633
QY L + HG GPS
Sbjct: 61 KQYL-LYLGSLLHGDL-GPS 78
>UniRef50_Q3A9M3 Cluster: Oligopeptide ABC transporter, permease
protein; n=2; Bacteria|Rep: Oligopeptide ABC
transporter, permease protein - Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008)
Length = 308
Score = 64.5 bits (150), Expect = 2e-09
Identities = 28/63 (44%), Positives = 39/63 (61%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPPEVMANIEAKYHLNDPIM 573
M I +R I ++++ TI+FF+M PG PFT LPPEV N+ AKYHL+ P++
Sbjct: 1 MFAIIRQRIFSGIIAVWLIATITFFLMHSIPGGPFTDAKKLPPEVEKNLMAKYHLDQPLL 60
Query: 574 TQY 582
QY
Sbjct: 61 KQY 63
>UniRef50_A0Q887 Cluster: Peptide/opine/nickel uptake transporter
(PepT) family protein; n=5; Francisella tularensis|Rep:
Peptide/opine/nickel uptake transporter (PepT) family
protein - Francisella tularensis subsp. novicida (strain
U112)
Length = 312
Score = 64.5 bits (150), Expect = 2e-09
Identities = 33/84 (39%), Positives = 51/84 (60%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPPEVMANIEAKYHLNDPIM 573
M+KFIL+R L AIPT+F +ITI+F ++ L PG PF+ + + +V+ + +Y ++ P+
Sbjct: 1 MMKFILKRILGAIPTVFFVITITFLLVHLTPGDPFSSDRAMSQQVLDKLHHQYGMDLPLW 60
Query: 574 TQYFQLPENNWAHG*FSGPSXLNI 645
QY +N H F G S NI
Sbjct: 61 QQYLTYLKNLIFHFDF-GLSYKNI 83
>UniRef50_Q49WC0 Cluster: ABC-type dipeptide oligopeptide nickel
transport system permease component; n=1; Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305|Rep:
ABC-type dipeptide oligopeptide nickel transport system
permease component - Staphylococcus saprophyticus subsp.
saprophyticus (strain ATCC 15305 /DSM 20229)
Length = 308
Score = 62.5 bits (145), Expect = 1e-08
Identities = 32/69 (46%), Positives = 44/69 (63%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPPEVMANIEAKYHLNDPIM 573
MLK++L+R I +LFI+I+I+FF+M+L PGSPF E L E + KY LNDP+
Sbjct: 1 MLKYVLKRLGYMILSLFIIISITFFLMKLMPGSPFNDE-KLNEEQKQILNEKYGLNDPVP 59
Query: 574 TQYFQLPEN 600
QY +N
Sbjct: 60 VQYVSYLKN 68
>UniRef50_Q8KBZ9 Cluster: Peptide ABC transporter, permease protein;
n=10; Chlorobiaceae|Rep: Peptide ABC transporter,
permease protein - Chlorobium tepidum
Length = 321
Score = 60.9 bits (141), Expect = 3e-08
Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSP--FTGELTLPPEVMANIEAKYHLNDP 567
ML++I +R L A+P +F ++T++FF++RLAPG P F + + P V I +Y LNDP
Sbjct: 1 MLRYIFKRLLIAVPLIFGVLTLTFFIIRLAPGDPAAFFIQPGISPNVAEQIRQQYGLNDP 60
Query: 568 IMTQYFQLPENNWAHG*F 621
+ QY + N HG F
Sbjct: 61 LPVQYIKW-LGNVLHGDF 77
>UniRef50_Q88XE6 Cluster: Oligopeptide ABC transporter, permease
protein; n=13; Bacilli|Rep: Oligopeptide ABC
transporter, permease protein - Lactobacillus plantarum
Length = 309
Score = 60.9 bits (141), Expect = 3e-08
Identities = 28/64 (43%), Positives = 40/64 (62%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPPEVMANIEAKYHLNDPIM 573
M K++L+R TLFI+ T +FF+M+L PG+P E L P A+I A+Y L+ P+
Sbjct: 1 MRKYLLKRIFYLFLTLFIVATATFFLMKLMPGTPLQNEAKLTPSEKASILAQYGLDKPVW 60
Query: 574 TQYF 585
QYF
Sbjct: 61 LQYF 64
>UniRef50_Q28M48 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=7;
Rhodobacteraceae|Rep: Binding-protein-dependent
transport systems inner membrane component - Jannaschia
sp. (strain CCS1)
Length = 335
Score = 60.5 bits (140), Expect = 4e-08
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTG-ELTLPPEVMANIEAKYHLNDPI 570
ML F +RR + AIPTL + I F +++L+P P G LT+PPEV I +NDP+
Sbjct: 1 MLTFTIRRLILAIPTLIFISFIIFLIVKLSPSDPTAGLPLTIPPEVREAIRESLGVNDPV 60
Query: 571 MTQYFQ 588
QYF+
Sbjct: 61 FVQYFK 66
>UniRef50_Q97D49 Cluster: Oligopeptide ABC transporter, permease
component; n=6; Clostridium|Rep: Oligopeptide ABC
transporter, permease component - Clostridium
acetobutylicum
Length = 310
Score = 59.7 bits (138), Expect = 7e-08
Identities = 29/74 (39%), Positives = 45/74 (60%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPPEVMANIEAKYHLNDPIM 573
MLK+ L+R + I T++I+ITI+F MM PG+PF+ +L P+ N+ +Y L+ P+
Sbjct: 1 MLKYTLKRFVYMIITIWIVITITFVMMHSIPGNPFSTGRSLSPQTKINLNKRYGLDKPLP 60
Query: 574 TQYFQLPENNWAHG 615
QY +N HG
Sbjct: 61 AQYAIFLKNLVFHG 74
>UniRef50_Q7UHZ1 Cluster: Oligopeptide transport system permease
protein OppB; n=2; Planctomycetaceae|Rep: Oligopeptide
transport system permease protein OppB - Rhodopirellula
baltica
Length = 309
Score = 59.3 bits (137), Expect = 9e-08
Identities = 26/64 (40%), Positives = 42/64 (65%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPPEVMANIEAKYHLNDPIM 573
+L F++RR TL+ + T+SF +MR APGSPF+ E +PP + + A+Y+L+ P +
Sbjct: 4 LLGFLIRRLGWMAITLWAVYTVSFVLMRAAPGSPFSAERAMPPAIEQQMRARYNLDAPPL 63
Query: 574 TQYF 585
QY+
Sbjct: 64 QQYW 67
>UniRef50_A5KJC9 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus torques ATCC 27756|Rep: Putative
uncharacterized protein - Ruminococcus torques ATCC
27756
Length = 308
Score = 58.0 bits (134), Expect = 2e-07
Identities = 27/69 (39%), Positives = 44/69 (63%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPPEVMANIEAKYHLNDPIM 573
M+++ +R L I +LF+L T++FF++RL PGSPF + +V+ +E +Y LNDP++
Sbjct: 1 MMRYTWKRILTGIVSLFLLATVTFFLVRLIPGSPFQ-RGGVSEQVVEAVEEEYGLNDPLI 59
Query: 574 TQYFQLPEN 600
QY N
Sbjct: 60 EQYLSYMGN 68
>UniRef50_Q81TS3 Cluster: Oligopeptide ABC transporter, permease
protein; n=54; Bacteria|Rep: Oligopeptide ABC
transporter, permease protein - Bacillus anthracis
Length = 309
Score = 56.8 bits (131), Expect = 5e-07
Identities = 26/63 (41%), Positives = 39/63 (61%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPPEVMANIEAKYHLNDPIM 573
M +++L+R + TLF++ T++FF+M+L PGSP + L P I KY LNDP+
Sbjct: 1 MGRYVLKRFVYMALTLFLITTLTFFLMKLLPGSPLKNQEKLSPAQKEIILEKYGLNDPVP 60
Query: 574 TQY 582
QY
Sbjct: 61 VQY 63
>UniRef50_A5WBD9 Cluster: Extracellular solute-binding protein,
family 5 precursor; n=1; Psychrobacter sp. PRwf-1|Rep:
Extracellular solute-binding protein, family 5 precursor
- Psychrobacter sp. PRwf-1
Length = 558
Score = 56.0 bits (129), Expect = 8e-07
Identities = 28/51 (54%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAETLK--VTDEAHAQL 148
WC DYNEP++FLN S +S N Y S FDSIM +TLK VT E A+L
Sbjct: 455 WCGDYNEPSTFLNIAKSGNSNNWGGYSSVKFDSIMNQTLKEGVTAEQRAEL 505
Score = 32.7 bits (71), Expect = 8.8
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +1
Query: 139 RTALYTKAEQQLDKDSAIVPVYYYVNARLVKPWV 240
R LY +AE QLD D + V++ V +VKP+V
Sbjct: 502 RAELYRQAEAQLDADMPQLNVFHIVKLSMVKPYV 535
>UniRef50_A1AYK8 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=1; Paracoccus
denitrificans PD1222|Rep: Binding-protein-dependent
transport systems inner membrane component - Paracoccus
denitrificans (strain Pd 1222)
Length = 311
Score = 56.0 bits (129), Expect = 8e-07
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGEL--TLPPEVMANIEAKYHLNDP 567
M ++IL R L+A+PT+ +++T+ F MR+ PG P L PE +A ++ LNDP
Sbjct: 1 MTRYILTRLLDAVPTMLLVLTLVFLAMRVLPGDPALAALGDGAQPEAIAQFRERFGLNDP 60
Query: 568 IMTQY 582
+ QY
Sbjct: 61 LWLQY 65
>UniRef50_Q7AP39 Cluster: Lin0183 protein; n=18; Firmicutes|Rep:
Lin0183 protein - Listeria innocua
Length = 316
Score = 54.4 bits (125), Expect = 3e-06
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELT--LPPEVMANIEAKYHLNDP 567
MLK I++R L+ IP LFI+ ISF +++LAPG P +T + P+ + I L+ P
Sbjct: 1 MLKTIIKRVLQIIPMLFIISIISFALIKLAPGDPVNSFVTPDMNPDDVERIRQSLGLDQP 60
Query: 568 IMTQYF 585
I QYF
Sbjct: 61 IYVQYF 66
>UniRef50_Q0LGE8 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=1;
Herpetosiphon aurantiacus ATCC 23779|Rep:
Binding-protein-dependent transport systems inner
membrane component precursor - Herpetosiphon aurantiacus
ATCC 23779
Length = 335
Score = 54.4 bits (125), Expect = 3e-06
Identities = 25/58 (43%), Positives = 36/58 (62%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPPEVMANIEAKYHLNDP 567
M+ FI+RR L IP LF++ I+FFMM+ A G PF E + P +A + K+ L+ P
Sbjct: 1 MIGFIIRRVLAMIPVLFLVALITFFMMKQAKGGPFDQEKEVAPSTIALLNRKFGLDKP 58
>UniRef50_A6DGV5 Cluster: ABC-type dipeptide/oligopeptide/nickel
transport system, permease component; n=1; Lentisphaera
araneosa HTCC2155|Rep: ABC-type
dipeptide/oligopeptide/nickel transport system, permease
component - Lentisphaera araneosa HTCC2155
Length = 311
Score = 54.4 bits (125), Expect = 3e-06
Identities = 23/63 (36%), Positives = 36/63 (57%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPPEVMANIEAKYHLNDPIM 573
M K++L+R I T+ + T +FF M + PG P + E + PE +EA+Y ++ PI
Sbjct: 1 MKKYLLKRLWHGIITILFISTATFFAMHMVPGDPLSSEKAITPETRKALEAEYGIDKPIA 60
Query: 574 TQY 582
QY
Sbjct: 61 IQY 63
>UniRef50_A4AFM8 Cluster: Dipeptide ABC transporter, permease
protein; n=1; marine actinobacterium PHSC20C1|Rep:
Dipeptide ABC transporter, permease protein - marine
actinobacterium PHSC20C1
Length = 338
Score = 54.0 bits (124), Expect = 3e-06
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSP---FTGELTLPPEVMANIEAKYHLND 564
ML+F L+R L A+ L IL + F M RL P +P + G PPEV+A + A+ L+
Sbjct: 1 MLRFTLKRLLTAVVVLLILTLVVFLMTRLIPSNPAIVYVGPKA-PPEVIARVTAELGLDR 59
Query: 565 PIMTQYFQ 588
PI QYF+
Sbjct: 60 PIFVQYFE 67
>UniRef50_Q8ELZ5 Cluster: Oligopeptide ABC transporter permease;
n=5; Firmicutes|Rep: Oligopeptide ABC transporter
permease - Oceanobacillus iheyensis
Length = 318
Score = 53.6 bits (123), Expect = 4e-06
Identities = 30/67 (44%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSP---FTGELTLPPEVMANIEAKYHLND 564
M KFI+RR L+ IP L + + F MM L PG P GE + P E + NI + LN+
Sbjct: 1 MFKFIIRRLLQTIPVLIGVSILVFSMMHLIPGDPAQILAGE-SAPKEQVENIRERLGLNE 59
Query: 565 PIMTQYF 585
PI QYF
Sbjct: 60 PIPMQYF 66
>UniRef50_Q87FE0 Cluster: Oligopeptide ABC transporter, periplasmic
oligopeptide-binding protein; n=5; Vibrio|Rep:
Oligopeptide ABC transporter, periplasmic
oligopeptide-binding protein - Vibrio parahaemolyticus
Length = 541
Score = 53.6 bits (123), Expect = 4e-06
Identities = 23/48 (47%), Positives = 30/48 (62%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAETLKVTDEAHAQ 145
WC DYNE ++FL+ + S SS N A Y S A+D++M L TDE Q
Sbjct: 441 WCGDYNEASTFLSLLRSGSSGNFARYSSQAYDNVMNSALSATDEKARQ 488
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = +1
Query: 136 ARTALYTKAEQQLDKDSAIVPVYYYVNARLVKPWVGGY 249
AR Y +AEQ L D I P+YYY+ ARLV+P VGG+
Sbjct: 486 ARQGFYDQAEQLLAADMPIAPIYYYMQARLVRPTVGGF 523
>UniRef50_Q7VVH4 Cluster: ABC-transport protein, inner membrane
component; n=15; Proteobacteria|Rep: ABC-transport
protein, inner membrane component - Bordetella pertussis
Length = 317
Score = 52.4 bits (120), Expect = 1e-05
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSP---FTGELTLPPEVMANIEAKYHLND 564
M K ILRR + AIPTL ++ I F + ++ PG P GE P V+ + KY LND
Sbjct: 4 MFKLILRRVVVAIPTLILVSMIVFMLQKILPGDPVLTLAGE-ERDPAVLDYLREKYRLND 62
Query: 565 PIMTQY 582
P+ QY
Sbjct: 63 PLPVQY 68
>UniRef50_Q48E35 Cluster: Peptide ABC transporter, permease protein;
n=9; Proteobacteria|Rep: Peptide ABC transporter,
permease protein - Pseudomonas syringae pv. phaseolicola
(strain 1448A / Race 6)
Length = 315
Score = 52.4 bits (120), Expect = 1e-05
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Frame = +1
Query: 400 KFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGEL--TLPPEVMANIEAKYHLNDPIM 573
+FIL+R L+ +P LF + ++F ++R PG P L P+ +ANI A+Y L++P+
Sbjct: 7 RFILQRPLQLLPVLFGISLVTFILVRSIPGDPARILLGARSTPQALANIRAQYGLDEPLW 66
Query: 574 TQYFQLPEN 600
TQY +N
Sbjct: 67 TQYVYFMKN 75
>UniRef50_Q0ER61 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=2;
Thermoanaerobacter ethanolicus|Rep:
Binding-protein-dependent transport systems inner
membrane component - Thermoanaerobacter ethanolicus X514
Length = 306
Score = 52.4 bits (120), Expect = 1e-05
Identities = 25/69 (36%), Positives = 39/69 (56%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPPEVMANIEAKYHLNDPIM 573
M ++IL R + ++ T + L+TI FF++RL PG PF E + PE+ N+ Y + P+
Sbjct: 1 MARYILNRLVVSLITAWFLVTIVFFLVRLLPGDPFLSE-KVTPEIKQNMMEYYGFDKPLH 59
Query: 574 TQYFQLPEN 600
QY N
Sbjct: 60 VQYITYISN 68
>UniRef50_Q822S7 Cluster: Peptide ABC transporter, permease protein;
n=7; Chlamydiaceae|Rep: Peptide ABC transporter,
permease protein - Chlamydophila caviae
Length = 327
Score = 52.0 bits (119), Expect = 1e-05
Identities = 24/67 (35%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFT--GELTLPPEVMANIEAKYHLNDP 567
M ++I +R + + +L+I++T++F +M+ PG PF G TL E + ++A+Y LN P
Sbjct: 1 MFRYIKKRLVFNLLSLWIVLTLTFLVMKTIPGDPFNDEGSNTLSQETLQILKARYGLNKP 60
Query: 568 IMTQYFQ 588
+ QY Q
Sbjct: 61 LYQQYIQ 67
>UniRef50_Q73QP9 Cluster: Oligopeptide/dipeptide ABC transporter,
permease protein; n=1; Treponema denticola|Rep:
Oligopeptide/dipeptide ABC transporter, permease protein
- Treponema denticola
Length = 320
Score = 52.0 bits (119), Expect = 1e-05
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSP---FTGELTLPPEVMANIEAKYHLND 564
M K+IL+R A T+ ++ TI+F ++ +APG+P G+ T E +E KY LN
Sbjct: 1 MKKYILKRSFSAFITIIVVFTINFIIINIAPGNPIKTMMGKETDNIEQTKALEEKYGLNK 60
Query: 565 PIMTQYFQLPEN 600
P+ QYF+ +N
Sbjct: 61 PLYEQYFRYLKN 72
>UniRef50_A7B6V9 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus gnavus ATCC 29149|Rep: Putative
uncharacterized protein - Ruminococcus gnavus ATCC 29149
Length = 309
Score = 52.0 bits (119), Expect = 1e-05
Identities = 25/63 (39%), Positives = 39/63 (61%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPPEVMANIEAKYHLNDPIM 573
M K+I +R + I +LF+L T++FF+ R+ PGSPF G + V+ +E +Y L+ P
Sbjct: 1 MAKYIGKRLVTGILSLFVLATVTFFLTRVIPGSPFQG-ANVSESVLQMMEEEYGLHQPAG 59
Query: 574 TQY 582
QY
Sbjct: 60 VQY 62
>UniRef50_P0AFU1 Cluster: Inner membrane ABC transporter permease
protein yejB; n=121; Proteobacteria|Rep: Inner membrane
ABC transporter permease protein yejB - Escherichia coli
O157:H7
Length = 364
Score = 41.9 bits (94), Expect(2) = 3e-05
Identities = 16/31 (51%), Positives = 26/31 (83%)
Frame = +1
Query: 403 FILRRCLEAIPTLFILITISFFMMRLAPGSP 495
+++RR L IPTL+ +ITI+FF++++APG P
Sbjct: 4 YLIRRLLLVIPTLWAIITINFFIVQIAPGGP 34
Score = 28.7 bits (61), Expect(2) = 3e-05
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 490 SPFTGELTLPPEVMANIEAKYHLNDPIMTQYFQL 591
S + G L PEV+A I +Y + PI +YF++
Sbjct: 73 SNYRGGRGLDPEVIAEITHRYGFDKPIHERYFKM 106
>UniRef50_Q9KGM9 Cluster: Oligopeptide ABC transporter; n=8;
Firmicutes|Rep: Oligopeptide ABC transporter - Bacillus
halodurans
Length = 314
Score = 50.8 bits (116), Expect = 3e-05
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSP---FTGELTLPPEVMANIEAKYHLND 564
M FI+RR L+ IP L + I F ++ L PG P GE + P + + NI + LND
Sbjct: 1 MFVFIIRRLLQTIPVLIGVSIIVFSLLHLVPGDPAIMIAGE-SAPQQTVENIRERLGLND 59
Query: 565 PIMTQYF 585
P+ QYF
Sbjct: 60 PVPVQYF 66
>UniRef50_O66777 Cluster: Transporter; n=2; Aquifex aeolicus|Rep:
Transporter - Aquifex aeolicus
Length = 327
Score = 50.8 bits (116), Expect = 3e-05
Identities = 28/68 (41%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTL----PPEVMANIEAKYHLN 561
M KFIL R L+AIPTL + +SF +++LAPG + +L L PE + ++ Y L+
Sbjct: 1 MFKFILFRVLQAIPTLLGVTFLSFLIIKLAPGD-YLDQLRLNPQISPETIERLKHLYGLD 59
Query: 562 DPIMTQYF 585
P++ QYF
Sbjct: 60 KPLLVQYF 67
>UniRef50_A1SP55 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=1;
Nocardioides sp. JS614|Rep: Binding-protein-dependent
transport systems inner membrane component precursor -
Nocardioides sp. (strain BAA-499 / JS614)
Length = 321
Score = 50.0 bits (114), Expect = 5e-05
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSP--FTGELTLPPEVMANIEAKYHLNDP 567
ML+ R L +IP L ++ ++F ++RLAPG P + L PPE + + L+DP
Sbjct: 1 MLRMATSRLLSSIPVLILISIVAFTLLRLAPGDPALLSVGLEAPPEALERARQEMRLDDP 60
Query: 568 IMTQYF 585
+ QY+
Sbjct: 61 VWAQYW 66
>UniRef50_A0JYI2 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=11; Bacteria|Rep:
Binding-protein-dependent transport systems inner
membrane component - Arthrobacter sp. (strain FB24)
Length = 363
Score = 50.0 bits (114), Expect = 5e-05
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = +1
Query: 370 RHRPEGRAMLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGEL--TLPPEVMANIE 543
+ + G + ++IL R L PT+ IL+T+ FF+MR+ G P T L LPPE +A
Sbjct: 19 KKKSSGGGLGQYILIRFLLIFPTILILVTMVFFLMRIT-GDPITAALGGRLPPEQLAERI 77
Query: 544 AKYHLNDPIMTQYFQ 588
+ PI+ QYF+
Sbjct: 78 TAAGYDRPILVQYFE 92
>UniRef50_A7JXR1 Cluster: Bacterial extracellular solute-binding
proteins, family 5; n=5; Vibrionales|Rep: Bacterial
extracellular solute-binding proteins, family 5 - Vibrio
sp. Ex25
Length = 541
Score = 49.6 bits (113), Expect = 7e-05
Identities = 22/48 (45%), Positives = 29/48 (60%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAETLKVTDEAHAQ 145
WC DYNE ++FL+ + S SS N A Y S A+D+ M L T+E Q
Sbjct: 441 WCGDYNEASTFLSLLRSGSSGNFARYSSEAYDNAMNSALAATNEKARQ 488
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = +1
Query: 136 ARTALYTKAEQQLDKDSAIVPVYYYVNARLVKPWVGGY 249
AR Y +AEQ L D I P+YYY+ ARLV+P VGG+
Sbjct: 486 ARQGFYDQAEQLLATDMPIAPIYYYMQARLVRPTVGGF 523
>UniRef50_Q73Q05 Cluster: Oligopeptide/dipeptide ABC transporter,
permease protein; n=1; Treponema denticola|Rep:
Oligopeptide/dipeptide ABC transporter, permease protein
- Treponema denticola
Length = 313
Score = 49.2 bits (112), Expect = 1e-04
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPF-TGELTLPPEVMANIEAKYHLNDPI 570
ML FIL+R L I T+FI+ +I+FF++ + PG+P T LP E + ++Y + +
Sbjct: 1 MLNFILKRILYGILTMFIVASITFFLVHIIPGNPIETIAENLPEERRNELYSQYGYDKSL 60
Query: 571 MTQYFQLPEN 600
TQY +N
Sbjct: 61 FTQYMVFWKN 70
>UniRef50_Q8RTF5 Cluster: OppB; n=15; Lactobacillales|Rep: OppB -
Oenococcus oeni (Leuconostoc oenos)
Length = 307
Score = 49.2 bits (112), Expect = 1e-04
Identities = 31/83 (37%), Positives = 45/83 (54%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPPEVMANIEAKYHLNDPIM 573
M K+IL+R L + T+FI+ ++F MM+ PGSPF L +A + +Y L+ PI
Sbjct: 1 MAKYILKRILMMVLTVFIVTALTFVMMQWMPGSPFNNP-KLSASQIAQLSKQYGLSKPIW 59
Query: 574 TQYFQLPENNWAHG*FSGPSXLN 642
Q+ N AH F G S +N
Sbjct: 60 QQFLNYLVNA-AHFNF-GTSYIN 80
>UniRef50_Q1AXP5 Cluster: Twin-arginine translocation pathway
signal; n=1; Rubrobacter xylanophilus DSM 9941|Rep:
Twin-arginine translocation pathway signal - Rubrobacter
xylanophilus (strain DSM 9941 / NBRC 16129)
Length = 573
Score = 49.2 bits (112), Expect = 1e-04
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAETLKVTDEA 136
W ADYN+P +FL+ LS+SS NT Y +P +D ++ + + TD A
Sbjct: 472 WIADYNDPMTFLDLFLSDSSFNTGGYSNPRYDRLINQAKEETDFA 516
>UniRef50_A5FQK1 Cluster: Nickel-transporting ATPase; n=2;
Dehalococcoides|Rep: Nickel-transporting ATPase -
Dehalococcoides sp. BAV1
Length = 305
Score = 49.2 bits (112), Expect = 1e-04
Identities = 25/63 (39%), Positives = 35/63 (55%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPPEVMANIEAKYHLNDPIM 573
M K+ILRR L L + I+F +M L PG P+ E L P+++ N+ KY L+ P
Sbjct: 1 MGKYILRRILWLGLVLLAVSFITFSLMHLVPGGPWDREKELAPQIVENLNIKYGLDKPFY 60
Query: 574 TQY 582
QY
Sbjct: 61 EQY 63
>UniRef50_Q5LPN3 Cluster: Peptide/nickel/opine uptake family ABC
transporter, permease protein; n=10;
Rhodobacterales|Rep: Peptide/nickel/opine uptake family
ABC transporter, permease protein - Silicibacter
pomeroyi
Length = 335
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTG-ELTLPPEVMANIEAKYHLNDPI 570
ML F +RR + A+PTL + + F ++ LAPG P LT+PPEV + L P+
Sbjct: 1 MLTFTIRRLVLAVPTLLFISLVIFLLLELAPGDPMAQVPLTVPPEVKEKMREALGLGQPM 60
Query: 571 MTQYFQ 588
++++
Sbjct: 61 HIRFWK 66
>UniRef50_A6X471 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=1;
Ochrobactrum anthropi ATCC 49188|Rep:
Binding-protein-dependent transport systems inner
membrane component precursor - Ochrobactrum anthropi
(strain ATCC 49188 / DSM 6882 / NCTC 12168)
Length = 327
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPG---SPFTGEL-TLPPEVMANIEAKYHLN 561
+L F LRR L+AIP + +++ SF +++LAPG G++ P+ +AN+ +Y L+
Sbjct: 6 ILTFALRRILQAIPVILLIMIGSFLLIKLAPGDTVDALVGDMGGADPQFVANLRTEYGLD 65
Query: 562 DPIMTQ 579
P+ TQ
Sbjct: 66 QPVWTQ 71
>UniRef50_Q930F4 Cluster: Putative ABC transporter, permease; n=1;
Sinorhizobium meliloti|Rep: Putative ABC transporter,
permease - Rhizobium meliloti (Sinorhizobium meliloti)
Length = 338
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = +1
Query: 385 GRAMLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFT---GELTLPPEVMANIEAKYH 555
G +++ FI RR IP L I+ F ++ +APG P + G P +A I A+YH
Sbjct: 20 GSSLVVFITRRFAVTIPLLLIISFGVFALIHIAPGDPVSSLLGARASDPATLAAIRARYH 79
Query: 556 LNDPIMTQY 582
L+D ++ QY
Sbjct: 80 LDDSLLVQY 88
>UniRef50_Q81UG5 Cluster: Oligopeptide ABC transporter, permease
protein; n=9; Bacillus cereus group|Rep: Oligopeptide
ABC transporter, permease protein - Bacillus anthracis
Length = 316
Score = 48.4 bits (110), Expect = 2e-04
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELT--LPPEVMANIEAKYHLNDP 567
M K I +R L AIP LF++ ISF +++LAPG P +T + P + I L+ P
Sbjct: 1 MYKVIAKRLLNAIPLLFVISIISFLLIKLAPGDPVRNFVTPNMSPIDVERIRKSLGLDQP 60
Query: 568 IMTQY 582
I QY
Sbjct: 61 IYMQY 65
>UniRef50_Q7P899 Cluster: Dipeptide transport system permease
protein dppB; n=4; Bacteria|Rep: Dipeptide transport
system permease protein dppB - Fusobacterium nucleatum
subsp. vincentii ATCC 49256
Length = 308
Score = 48.4 bits (110), Expect = 2e-04
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSP---FTGELTLPPEVMANIEAKYHLND 564
M K+IL+R + IP + + + F +M L PG P GE + P E +A + K LND
Sbjct: 1 MYKYILKRLVLLIPVMLGVTLLVFTIMYLTPGDPAQLILGE-SAPKEAVAALREKMGLND 59
Query: 565 PIMTQYFQLPEN 600
P QYF+ +N
Sbjct: 60 PFFMQYFRFVKN 71
>UniRef50_A4W8Y3 Cluster: Extracellular solute-binding protein,
family 5 precursor; n=3; Enterobacteriaceae|Rep:
Extracellular solute-binding protein, family 5 precursor
- Enterobacter sp. 638
Length = 542
Score = 48.4 bits (110), Expect = 2e-04
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +1
Query: 139 RTALYTKAEQQLDKDSAIVPVYYYVNARLVKPWVGGYT 252
R Y +AE L +D +PVY+YV LVKPWVGG+T
Sbjct: 488 RGKFYQQAEDLLAQDVPAIPVYHYVRTHLVKPWVGGFT 525
Score = 45.2 bits (102), Expect = 0.002
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAETLK 121
W ADY++ +FLN + S NT+ Y +PA+D+ +AE K
Sbjct: 442 WIADYDDAATFLNNFRTGDSENTSQYSNPAYDNALAEAAK 481
>UniRef50_A5US99 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=2;
Roseiflexus|Rep: Binding-protein-dependent transport
systems inner membrane component precursor - Roseiflexus
sp. RS-1
Length = 307
Score = 48.0 bits (109), Expect = 2e-04
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTG-ELTLPPEVMANIEAKYHLNDPI 570
M+ +IL+R F++ ++F +M PG PF + LPP ANI KY L+ P+
Sbjct: 1 MVAYILKRLAGLAFVFFLVSVVAFLLMHSTPGGPFDEPNMPLPPAAKANILRKYGLDQPL 60
Query: 571 MTQYFQLPEN 600
QY N
Sbjct: 61 HIQYINYISN 70
>UniRef50_A7BKM5 Cluster: Peptide ABC transporter, permease protein;
n=1; Beggiatoa sp. SS|Rep: Peptide ABC transporter,
permease protein - Beggiatoa sp. SS
Length = 320
Score = 47.6 bits (108), Expect = 3e-04
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLP---PEVMANIEAKYHLND 564
M +ILR L+ LFI+ I+ ++ LAPG P + + P PE +A I A +HL+D
Sbjct: 1 MWSYILRNLLQRCVLLFIVSVIAHSIVHLAPGEPSEVDPSNPRMQPEDIAKIRAAFHLDD 60
Query: 565 PIMTQY 582
P+ QY
Sbjct: 61 PLHQQY 66
>UniRef50_A6M0G0 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=2; Clostridium|Rep:
Binding-protein-dependent transport systems inner
membrane component - Clostridium beijerinckii NCIMB 8052
Length = 323
Score = 47.2 bits (107), Expect = 4e-04
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = +1
Query: 400 KFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGEL--TLPPEVMANIEAKYHLNDPIM 573
K++ RR ++ IP L + I F +++L PG PF+ + L E+ + + NDPI+
Sbjct: 6 KYVFRRLIQTIPVLIGISIIVFMLVKLQPGDPFSSMMDPNLSQEMKEKMLEQLGYNDPIL 65
Query: 574 TQYFQ 588
QYF+
Sbjct: 66 IQYFK 70
>UniRef50_O28506 Cluster: Dipeptide ABC transporter, permease
protein; n=10; cellular organisms|Rep: Dipeptide ABC
transporter, permease protein - Archaeoglobus fulgidus
Length = 354
Score = 47.2 bits (107), Expect = 4e-04
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Frame = +1
Query: 403 FILRRCLEAIPTLFILITISFFMMRLAPGSPFTGEL--TLPPEVMANIEAKYHLNDPIMT 576
+I+ R L IPT+ IL+TI F ++R+ PG P T + +P EV+ + + L+ P
Sbjct: 25 YIITRFLMVIPTVLILLTIVFLILRIIPGDPITAMVGQKVPEEVLEKLRHEAGLDKPYHE 84
Query: 577 QYFQ 588
QY +
Sbjct: 85 QYIE 88
>UniRef50_Q9CMX3 Cluster: Putative uncharacterized protein PM0678;
n=1; Pasteurella multocida|Rep: Putative uncharacterized
protein PM0678 - Pasteurella multocida
Length = 523
Score = 46.8 bits (106), Expect = 5e-04
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAETLKV---TDEAHAQLCTLKQNNS 172
WCADYNEP++FLN S ++ N A Y D ++ +TL + T+ H Q
Sbjct: 419 WCADYNEPSAFLNIFYSQAADNQAGYHHAEVDKLLEQTLLLQTETERKHLYSKITTQLQQ 478
Query: 173 WIRIRPLFLFIT 208
+ P+F + T
Sbjct: 479 DYVVLPIFQYTT 490
Score = 32.7 bits (71), Expect = 8.8
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 139 RTALYTKAEQQLDKDSAIVPVYYYVNARLVKPWVGGY 249
R LY+K QL +D ++P++ Y + P V GY
Sbjct: 465 RKHLYSKITTQLQQDYVVLPIFQYTTPIFIHPTVTGY 501
>UniRef50_Q46863 Cluster: Putative binding protein ygiS precursor;
n=10; Enterobacteriaceae|Rep: Putative binding protein
ygiS precursor - Escherichia coli (strain K12)
Length = 535
Score = 46.8 bits (106), Expect = 5e-04
Identities = 17/43 (39%), Positives = 30/43 (69%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAETLKVTD 130
W A YN+ +SFLNT+ S+S N H+K+ +D+++ + ++TD
Sbjct: 434 WDATYNDASSFLNTLKSDSEENVGHWKNAQYDALLNQATQITD 476
Score = 40.3 bits (90), Expect = 0.044
Identities = 15/37 (40%), Positives = 27/37 (72%)
Frame = +1
Query: 139 RTALYTKAEQQLDKDSAIVPVYYYVNARLVKPWVGGY 249
R ALY +AE +++ + ++P+YY +L+KP+VGG+
Sbjct: 480 RNALYQQAEVIINQQAPLIPIYYQPLIKLLKPYVGGF 516
>UniRef50_Q8YVG6 Cluster: Permease protein of ABC transporter; n=14;
Bacteria|Rep: Permease protein of ABC transporter -
Anabaena sp. (strain PCC 7120)
Length = 335
Score = 46.4 bits (105), Expect = 7e-04
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPP----EVMANIEAKYHLN 561
M K+++ R L AIPTL + + F ++ LAPG P GE L P EV NI+ L+
Sbjct: 16 MNKYLINRLLVAIPTLIAISLVIFTILALAPGDPM-GEFALNPSITAEVRENIKRSLGLD 74
Query: 562 DPIMTQYFQ 588
PI +Y +
Sbjct: 75 QPIHIRYIK 83
>UniRef50_A4M636 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=1;
Petrotoga mobilis SJ95|Rep: Binding-protein-dependent
transport systems inner membrane component precursor -
Petrotoga mobilis SJ95
Length = 326
Score = 46.4 bits (105), Expect = 7e-04
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPP----EVMANIEAKYHLN 561
+LK+I+RR + AIP L + ISFF+M+LAPG F + P E + +E Y L+
Sbjct: 3 LLKYIIRRLILAIPVLLGVSVISFFVMQLAPGD-FLDTYRINPNISREQIQELERLYGLD 61
Query: 562 DPIMTQYF 585
+TQYF
Sbjct: 62 KNPVTQYF 69
>UniRef50_P0A4N7 Cluster: Oligopeptide transport system permease
protein oppB; n=38; Bacilli|Rep: Oligopeptide transport
system permease protein oppB - Lactococcus lactis subsp.
lactis (Streptococcus lactis)
Length = 319
Score = 46.4 bits (105), Expect = 7e-04
Identities = 30/68 (44%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGEL---TLPPEVMANIEAKYHLND 564
M K I+RR L IP LFIL + FF +L PG PF+G + T P EV A + L D
Sbjct: 1 MWKVIIRRILLMIPQLFILSILVFFFAKLMPGDPFSGLIGPHTDPHEVEA-LRRAAGLYD 59
Query: 565 PIMTQYFQ 588
P QY +
Sbjct: 60 PWWEQYLR 67
>UniRef50_P42062 Cluster: Oligopeptide transport system permease
protein appB; n=4; Bacillaceae|Rep: Oligopeptide
transport system permease protein appB - Bacillus
subtilis
Length = 317
Score = 46.4 bits (105), Expect = 7e-04
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPPEV-MANIE---AKYHLN 561
M +I+RR L +IP L + +SF +M+ APG P T L + P++ A+ E KY LN
Sbjct: 1 MAAYIIRRTLMSIPILLGITILSFVIMKAAPGDPMT--LMMDPKISQADREQFIEKYGLN 58
Query: 562 DPIMTQYFQ 588
DP QY +
Sbjct: 59 DPQYVQYLK 67
>UniRef50_Q67T60 Cluster: Oligopeptide ABC transporter permease
protein; n=2; Symbiobacterium thermophilum|Rep:
Oligopeptide ABC transporter permease protein -
Symbiobacterium thermophilum
Length = 328
Score = 46.0 bits (104), Expect = 9e-04
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSP------FTGELTLPPEVMANIEAKYH 555
M +++ +R L IP L I+ +SF +M+LAPG P + P+ + + K+
Sbjct: 1 MARYLTKRILNMIPLLIIVTLLSFGIMQLAPGGPEYVILSAEADAMSDPQKVEELREKWG 60
Query: 556 LNDPIMTQYFQ 588
LNDPI QY +
Sbjct: 61 LNDPIPVQYMR 71
>UniRef50_A5WXU5 Cluster: LecB; n=6; Proteobacteria|Rep: LecB -
Agrobacterium tumefaciens
Length = 313
Score = 46.0 bits (104), Expect = 9e-04
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGEL--TLPPEVMANIEAKYHLNDP 567
M +++RR L A+PTL ++T+ F ++RL PG L E +A + A+ L+ P
Sbjct: 1 MTTYVIRRLLLAVPTLLAMLTVVFILVRLVPGDAAVAMLGDRASAEALAALRAQLGLDQP 60
Query: 568 IMTQYFQ 588
+ QY +
Sbjct: 61 LPVQYLR 67
>UniRef50_P77348 Cluster: Periplasmic murein peptide-binding protein
precursor; n=42; Gammaproteobacteria|Rep: Periplasmic
murein peptide-binding protein precursor - Escherichia
coli (strain K12)
Length = 537
Score = 46.0 bits (104), Expect = 9e-04
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +1
Query: 136 ARTALYTKAEQQLDKDSAIVPVYYYVNARLVKPWVGGY 249
AR A Y AE+ L + + I P+Y Y N RL+KPW+ GY
Sbjct: 481 ARNADYNAAEKILMEQAPIAPIYQYTNGRLIKPWLKGY 518
Score = 43.6 bits (98), Expect = 0.005
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAE 112
W DYNEP++FL + S S N + + +PA+D ++A+
Sbjct: 436 WVGDYNEPSTFLTLLTSTHSGNISRFNNPAYDKVLAQ 472
>UniRef50_Q2JN44 Cluster: OppBC ABC transporter family, permease
protein; n=2; Synechococcus|Rep: OppBC ABC transporter
family, permease protein - Synechococcus sp. (strain
JA-2-3B'a(2-13)) (Cyanobacteria bacteriumYellowstone
B-Prime)
Length = 342
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Frame = +1
Query: 397 LKFILRRCLEAIPTLFILITISFFMMRLAPG---SPFTGELTLPPEVMANIEAKYHLNDP 567
L +L+R +A+P L ++ +SF +++LAPG P + ++ E +A EA+ L+ P
Sbjct: 20 LALVLQRLTQAVPVLLLITVLSFLLLQLAPGDFLDPLRADPSVSQEFIAQEEARLGLDKP 79
Query: 568 IMTQY 582
++ QY
Sbjct: 80 LVWQY 84
>UniRef50_Q11FQ8 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=1; Mesorhizobium sp.
BNC1|Rep: Binding-protein-dependent transport systems
inner membrane component - Mesorhizobium sp. (strain
BNC1)
Length = 314
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = +1
Query: 397 LKFILRRCLEAIPTLFILITISFFMMRLAPGSP---FTGELTLPPEVMANIEAKYHLNDP 567
+ + LRR AI T+ I ++ FF +R+ PG P GE PEV+A + + ++ P
Sbjct: 1 MNYYLRRLAVAIATVLISSSLVFFAIRILPGDPVMMLLGESAATPEVIARMAERLGMDAP 60
Query: 568 IMTQYFQ 588
+ QYF+
Sbjct: 61 LHVQYFR 67
>UniRef50_A4W6W0 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=3;
Bacteria|Rep: Binding-protein-dependent transport
systems inner membrane component precursor -
Enterobacter sp. 638
Length = 313
Score = 45.6 bits (103), Expect = 0.001
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSP---FTGELTLPPEVMANIEAKYHLND 564
ML+ I +R L AIPTL ++ + F + +L PG P GE P V+A + A+ +L+
Sbjct: 1 MLELICKRLLLAIPTLLLVSMMVFGLQKLLPGDPLIAMAGE-ERDPVVIAQLRAELNLDA 59
Query: 565 PIMTQYF 585
P+ QYF
Sbjct: 60 PLPVQYF 66
>UniRef50_Q2K5M4 Cluster: Oligopeptide ABC transporter,
substrate-binding protein; n=2; Rhizobium|Rep:
Oligopeptide ABC transporter, substrate-binding protein
- Rhizobium etli (strain CFN 42 / ATCC 51251)
Length = 526
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +1
Query: 109 GNAESD*RGARTALYTKAEQQLDKDSAIVPVYYYVNARLVKPWVGGYTGKIR 264
GNAE+D + R ++ KAEQ +SA +P+YYYV+ +V P V G+ I+
Sbjct: 464 GNAETDLK-KRAEIFKKAEQLALDESAALPIYYYVSKNVVSPKVEGFVDNIQ 514
Score = 40.7 bits (91), Expect = 0.033
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAETLKVTD 130
W ADYN+P +FLN +++ MN + +P +D ++ + TD
Sbjct: 427 WLADYNDPDNFLNLLVTGVQMNYGRWSNPDYDKMIKDGNAETD 469
>UniRef50_Q2CEF5 Cluster: Peptide ABC transporter, permease protein;
n=2; Bacteria|Rep: Peptide ABC transporter, permease
protein - Oceanicola granulosus HTCC2516
Length = 306
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSP--FTGELTLPPEVMANIEAKYHLNDP 567
ML F LRR L+ +P L ++ I+F + RL PG P G E +A I LN+P
Sbjct: 1 MLLFALRRLLQLVPVLIGVLVIAFAVTRLTPGDPAEIMGGFEASDETIAAIREDMGLNEP 60
Query: 568 IMTQY 582
I Q+
Sbjct: 61 IHRQF 65
>UniRef50_Q18QN7 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=2;
Desulfitobacterium hafniense|Rep:
Binding-protein-dependent transport systems inner
membrane component - Desulfitobacterium hafniense
(strain DCB-2)
Length = 314
Score = 45.2 bits (102), Expect = 0.002
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = +1
Query: 397 LKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGEL--TLPPEVMANIEAKYHLNDPI 570
LKF+LRR L IP LFI + F ++ L PG P L E +A + + L+ P+
Sbjct: 3 LKFMLRRFLYVIPMLFITTLVVFSLILLIPGDPVLAILGENATYEKVAELRQQLGLDQPV 62
Query: 571 MTQYFQLPENNWAHG 615
+ QY NN HG
Sbjct: 63 IMQYIHW-LNNAVHG 76
>UniRef50_Q11BX9 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=2;
Proteobacteria|Rep: Binding-protein-dependent transport
systems inner membrane component precursor -
Mesorhizobium sp. (strain BNC1)
Length = 319
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTL-----PPEVMANIEAKYHL 558
ML+++L R + AIPTL + T++FFM+ L PG L PE++A A+ L
Sbjct: 1 MLRYLLNRLMLAIPTLLGVATLTFFMLALLPGDAVETMLRADGGNPTPEIIAAERARLGL 60
Query: 559 NDPIMTQY 582
+ PI+ Q+
Sbjct: 61 DRPILVQF 68
>UniRef50_A5N711 Cluster: OppB; n=1; Clostridium kluyveri DSM
555|Rep: OppB - Clostridium kluyveri DSM 555
Length = 312
Score = 45.2 bits (102), Expect = 0.002
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLA---PGSPFTGELTLPPEVMANIEAKYHLND 564
ML++I++R L+ IP +FI+ I F M+R+ P + G E + +I KY+LN
Sbjct: 1 MLRYIMKRLLQFIPIIFIVSIIIFGMVRIPKIDPVAVIVGGGQASQEEINSIREKYNLNK 60
Query: 565 PIMTQYF 585
P++ QY+
Sbjct: 61 PMVIQYY 67
>UniRef50_A1S0Q2 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=1;
Thermofilum pendens Hrk 5|Rep: Binding-protein-dependent
transport systems inner membrane component precursor -
Thermofilum pendens (strain Hrk 5)
Length = 341
Score = 45.2 bits (102), Expect = 0.002
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = +1
Query: 400 KFILRRCLEAIPTLFILITISFFMMRLAPGSPFT--GELTLPPEVMANIEAKYHLNDPIM 573
+++L R L LF+L++ F +MR+ PG P T +P EV+A A+ L+ P+
Sbjct: 5 EYVLYRVLLTPVMLFVLLSFVFILMRVLPGDPITMLEGKNIPEEVLARRRAELGLDKPLY 64
Query: 574 TQYF 585
QYF
Sbjct: 65 VQYF 68
>UniRef50_Q9RU25 Cluster: Peptide ABC transporter, permease protein;
n=4; Deinococci|Rep: Peptide ABC transporter, permease
protein - Deinococcus radiodurans
Length = 333
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGEL----TLPPEVMANIEAKYHLN 561
+L +ILRR L+ IPT + ++FF+ + APG F +L ++ PE + + ++ L+
Sbjct: 7 LLPYILRRVLQFIPTFVLATMLAFFITQAAPGD-FLSQLKENPSVKPETIERLRREFGLD 65
Query: 562 DPIMTQY 582
P+ QY
Sbjct: 66 QPVFVQY 72
>UniRef50_A6NZV2 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 337
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Frame = +1
Query: 397 LKFILRRCLEAIPTLFILITISFFMMRLAPGSP---FTGELTLPPEVMANIEAKYHLNDP 567
LK+I +R L AIP + +++ I F + R+ PG P + GE+ +V + ++ LNDP
Sbjct: 3 LKYIAKRLLYAIPAVVLVVIIIFLLTRVMPGDPARAYLGEMATEEQV-EQLREEWGLNDP 61
Query: 568 IMTQY 582
+ Q+
Sbjct: 62 LPVQF 66
>UniRef50_Q2SMW9 Cluster: ABC-type oligopeptide transport system,
periplasmic component; n=1; Hahella chejuensis KCTC
2396|Rep: ABC-type oligopeptide transport system,
periplasmic component - Hahella chejuensis (strain KCTC
2396)
Length = 573
Score = 44.4 bits (100), Expect = 0.003
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAETLKVTDEA 136
W DYNE ++FL MLSNS N + + FD ++A+ TD A
Sbjct: 475 WNGDYNEASTFLTLMLSNSGNNDGKWNNAEFDKLLADARNSTDPA 519
Score = 39.1 bits (87), Expect = 0.10
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +1
Query: 151 YTKAEQQLDKDSAIVPVYYYVNARLVKPWVGGY 249
Y KAEQ L + + P+Y+Y R+V P +GGY
Sbjct: 522 YEKAEQILSAEMPVAPIYFYRGLRMVSPQLGGY 554
>UniRef50_Q9YFD8 Cluster: ABC transporter, permease protein; n=1;
Aeropyrum pernix|Rep: ABC transporter, permease protein
- Aeropyrum pernix
Length = 342
Score = 44.4 bits (100), Expect = 0.003
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGEL--TLPPEVMANIEAKYHLNDP 567
++K+I+ R L AIPTLF L + F + RL G P + + PE + + YH +DP
Sbjct: 2 LIKYIIYRFLSAIPTLFGLSILVFILTRLV-GDPAAIYIHPDMTPEDVQRVRELYHFDDP 60
Query: 568 IMTQY 582
+ QY
Sbjct: 61 LYVQY 65
>UniRef50_Q2FMZ9 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=1;
Methanospirillum hungatei JF-1|Rep:
Binding-protein-dependent transport systems inner
membrane component precursor - Methanospirillum hungatei
(strain JF-1 / DSM 864)
Length = 313
Score = 44.4 bits (100), Expect = 0.003
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSP--------FTG-ELTLPPEVMANIEA 546
M ++I+ R I TLFI +F ++ PG P F G E + PPE++A + A
Sbjct: 1 MHQYIVMRTGYLILTLFIASVFTFCVVNAIPGEPAEVLAKHLFLGLEESAPPELIAEVSA 60
Query: 547 KYHLNDPIMTQYFQLPENNWAHG*FSG 627
+Y LN P++ QY + W G SG
Sbjct: 61 RYDLNKPLIEQY-----SEWIRGILSG 82
>UniRef50_Q87Q03 Cluster: Oligopeptide ABC transporter, periplasmic
oligopeptide-binding protein; n=5;
Gammaproteobacteria|Rep: Oligopeptide ABC transporter,
periplasmic oligopeptide-binding protein - Vibrio
parahaemolyticus
Length = 536
Score = 44.0 bits (99), Expect = 0.004
Identities = 16/49 (32%), Positives = 31/49 (63%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAETLKVTDEAHAQL 148
W ADYNE +++L+ +SN N + Y +P +D +M+++ ++D + L
Sbjct: 437 WTADYNEASTWLDIFVSNGEYNDSRYHNPKYDELMSKSKTMSDPSELYL 485
Score = 38.3 bits (85), Expect = 0.18
Identities = 19/35 (54%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +1
Query: 148 LYTKAEQQLDKDSAIVPVYYYVNAR-LVKPWVGGY 249
LY +AE L D AI+PVY N + L+KP+VGGY
Sbjct: 483 LYLRAESMLIDDMAIIPVYRPGNDQYLIKPYVGGY 517
>UniRef50_Q74D85 Cluster: Peptide ABC transporter, permease protein;
n=13; Proteobacteria|Rep: Peptide ABC transporter,
permease protein - Geobacter sulfurreducens
Length = 326
Score = 44.0 bits (99), Expect = 0.004
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPPEVMANIEAK----YHLN 561
M +I +R L IP LF + I+F ++RLAPG P + P++ A + Y L+
Sbjct: 1 MAAYIFKRLLAMIPLLFGITLITFVVIRLAPGEPVEAMTAMSPKITAETRERLREFYGLD 60
Query: 562 DPIMTQY 582
P+ QY
Sbjct: 61 KPLHEQY 67
>UniRef50_A0KJT1 Cluster: Periplasmic murein peptide-binding
protein; n=2; Aeromonas|Rep: Periplasmic murein
peptide-binding protein - Aeromonas hydrophila subsp.
hydrophila (strain ATCC 7966 / NCIB 9240)
Length = 538
Score = 44.0 bits (99), Expect = 0.004
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = +1
Query: 139 RTALYTKAEQQLDKDSAIVPVYYYVNARLVKPWVGGY 249
R LY +AE +D ++ I PVY+YV +RL+KP + GY
Sbjct: 483 RNQLYQQAEALIDAEAPIAPVYFYVKSRLLKPNIKGY 519
>UniRef50_Q9RYU7 Cluster: Peptide ABC transporter, permease protein;
n=2; Deinococcus|Rep: Peptide ABC transporter, permease
protein - Deinococcus radiodurans
Length = 328
Score = 43.6 bits (98), Expect = 0.005
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLP---PEVMANIEAKYHLND 564
ML + LRR L IPTL ++ + F +++L PGS L P E +ANI + L+
Sbjct: 6 MLNYTLRRILGMIPTLLVISVLCFLVIKLQPGSFIDQYLEDPRFSKETVANITRQLGLDQ 65
Query: 565 PIMTQYFQLPENNWAHG 615
P QY NW G
Sbjct: 66 PAWKQYL-----NWITG 77
>UniRef50_Q6YR28 Cluster: ABC-type dipeptide/oligopeptide transport
system, permease component; n=2; Candidatus Phytoplasma
asteris|Rep: ABC-type dipeptide/oligopeptide transport
system, permease component - Onion yellows phytoplasma
Length = 308
Score = 43.6 bits (98), Expect = 0.005
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTG--ELTLPPEVMANIEAKYHLNDP 567
M+K+I ++ L I +I ISFF M++ PG P E L PE+ E + L+ P
Sbjct: 1 MIKYIFKKSLYTITLFITVIFISFFTMKMIPGDPVDAMFEKGLTPELRKLKEKELGLDKP 60
Query: 568 IMTQYFQLPEN 600
+ TQ+ +N
Sbjct: 61 LKTQFINYFKN 71
>UniRef50_Q65LC9 Cluster: AppB; n=1; Bacillus licheniformis ATCC
14580|Rep: AppB - Bacillus licheniformis (strain DSM 13
/ ATCC 14580)
Length = 316
Score = 43.6 bits (98), Expect = 0.005
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPPEVMA----NIEAKYHLN 561
M+ +I+RR L +IP LF + +SF +M+ APG P L + P + A KY L+
Sbjct: 1 MITYIIRRTLMSIPILFGITILSFAIMKAAPGDPMA--LMMDPTISAGDREKFIEKYGLD 58
Query: 562 DPIMTQYFQ 588
+P QY +
Sbjct: 59 EPEHVQYLK 67
>UniRef50_Q0I2I9 Cluster: Oligopeptide transporter,
periplasmic-binding protein; n=2; Histophilus somni|Rep:
Oligopeptide transporter, periplasmic-binding protein -
Haemophilus somnus (strain 129Pt) (Histophilus somni
(strain 129Pt))
Length = 523
Score = 43.6 bits (98), Expect = 0.005
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAETLKVTDE 133
WCADY EP+SFL S S N Y++P D ++ + L+ +E
Sbjct: 420 WCADYKEPSSFLLNFHSKSPDNKTGYQNPQVDQLLEKALQSLEE 463
>UniRef50_A0NZ98 Cluster: D-ala-D-ala transporter subunit; n=1;
Stappia aggregata IAM 12614|Rep: D-ala-D-ala transporter
subunit - Stappia aggregata IAM 12614
Length = 335
Score = 43.6 bits (98), Expect = 0.005
Identities = 28/67 (41%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFT---GELTLPPEVMANIEAKYHLND 564
ML FILRR L IP + L I F + RL PG P + G E+ A + ++ L+
Sbjct: 1 MLYFILRRILLLIPVVIGLTVIMFAIARLLPGDPVSLAAGPNATQSEIDA-LAREFGLDQ 59
Query: 565 PIMTQYF 585
PI TQYF
Sbjct: 60 PIWTQYF 66
>UniRef50_A0LI52 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=1; Syntrophobacter
fumaroxidans MPOB|Rep: Binding-protein-dependent
transport systems inner membrane component -
Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
Length = 332
Score = 43.6 bits (98), Expect = 0.005
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 11/74 (14%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFT-----------GELTLPPEVMANI 540
M +IL+R L+ IPTL + I+F +++LAPG+P T G+ + PEV+
Sbjct: 1 MKGYILKRLLQIIPTLLGITFITFLIIQLAPGNPATLKLQMSGQGQLGDRGISPEVIEQT 60
Query: 541 EAKYHLNDPIMTQY 582
+ Y L+ P+ QY
Sbjct: 61 KKLYGLDKPLHEQY 74
>UniRef50_A0JTR1 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=2;
Actinomycetales|Rep: Binding-protein-dependent transport
systems inner membrane component - Arthrobacter sp.
(strain FB24)
Length = 311
Score = 43.6 bits (98), Expect = 0.005
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSP---FTGELTLPPEVMANIEAKYHLND 564
M +IL+R + + T+F+ ++ F ++RLAPG P + G L E +A + ++ L+
Sbjct: 1 MTNYILKRLGQGLLTVFLTVSTVFILIRLAPGDPAVSYAGPLA-TSEQLARVREQFGLDK 59
Query: 565 PIMTQYF 585
P++ QY+
Sbjct: 60 PLLEQYW 66
>UniRef50_Q62DS2 Cluster: Oligopeptide ABC transporter, periplasmic
oligopeptide-binding protein; n=31; Burkholderia|Rep:
Oligopeptide ABC transporter, periplasmic
oligopeptide-binding protein - Burkholderia mallei
(Pseudomonas mallei)
Length = 554
Score = 43.2 bits (97), Expect = 0.006
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAE-TLKVTDEAHAQLCT 154
W ADYN+ +F + + SS NT Y +P DS++AE K+ D A A L T
Sbjct: 453 WFADYNDAMTFFDLIRCGSSQNTVGYCNPKVDSLVAEANQKLDDGARAALLT 504
Score = 41.1 bits (92), Expect = 0.025
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = +1
Query: 133 GARTALYTKAEQQLDKDSAIVPVYYYVNARLVKPWVGGYT 252
GAR AL T+A D +VP++ Y RLVK +VGGYT
Sbjct: 497 GARAALLTQAHDLAMNDYPMVPLFQYSADRLVKSYVGGYT 536
>UniRef50_Q28MU5 Cluster: Extracellular solute-binding protein
family 5; n=10; Proteobacteria|Rep: Extracellular
solute-binding protein family 5 - Jannaschia sp. (strain
CCS1)
Length = 539
Score = 43.2 bits (97), Expect = 0.006
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAETLKVTD 130
WC DYNE ++FL+ + SN+ N + + +D++MAE D
Sbjct: 440 WCGDYNEASTFLDLLTSNNDNNDGKFVNADYDALMAEAAVTAD 482
>UniRef50_A7BDU5 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 316
Score = 43.2 bits (97), Expect = 0.006
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSP---FTGELTLPPEVMANIEAKYHLND 564
ML +ILRR L +L + F ++ L PG P G L PEV + A+Y L++
Sbjct: 1 MLPYILRRLAGVAVVLTLLSFLVFSLLYLVPGDPVKILVGTRRLTPEVRQAVTARYGLDE 60
Query: 565 PIMTQYF 585
P++ +Y+
Sbjct: 61 PLVVRYW 67
>UniRef50_P44572 Cluster: Putative binding protein HI0213 precursor;
n=13; Haemophilus influenzae|Rep: Putative binding
protein HI0213 precursor - Haemophilus influenzae
Length = 514
Score = 42.7 bits (96), Expect = 0.008
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAETLKVTDE 133
WCAD+N+P +FLN S S N YK+ FD + + E
Sbjct: 412 WCADFNDPAAFLNLFYSKSPDNKNGYKNAEFDRLFESAMTTISE 455
>UniRef50_Q97D46 Cluster: Oligopeptide ABC transporter, periplasmic
substrate-binding component; n=2; Clostridium|Rep:
Oligopeptide ABC transporter, periplasmic
substrate-binding component - Clostridium acetobutylicum
Length = 550
Score = 42.3 bits (95), Expect = 0.011
Identities = 15/49 (30%), Positives = 33/49 (67%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAETLKVTDEAHAQL 148
W ADYN+P +F++ +++S N + Y +P +D+++ + K T++A ++
Sbjct: 451 WIADYNDPMTFMDLFVTDSGNNNSGYSNPEYDALIKDA-KTTNDADKRI 498
>UniRef50_Q89RA5 Cluster: ABC transporter permease protein; n=2;
Bacteria|Rep: ABC transporter permease protein -
Bradyrhizobium japonicum
Length = 313
Score = 42.3 bits (95), Expect = 0.011
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSP---FTGELTLPPEVMANIEAKYHLND 564
ML F+ R + +PTLF + + F + +L PG P GE P + I +Y L+
Sbjct: 1 MLNFLAHRIAQIVPTLFFVSVLIFSLQQLLPGDPALVMAGE-ERDPAAIEQIRQQYKLDR 59
Query: 565 PIMTQY 582
PI QY
Sbjct: 60 PIPVQY 65
>UniRef50_Q67KR8 Cluster: Oligopeptide ABC transporter permease
protein; n=1; Symbiobacterium thermophilum|Rep:
Oligopeptide ABC transporter permease protein -
Symbiobacterium thermophilum
Length = 321
Score = 42.3 bits (95), Expect = 0.011
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTG--ELTLPPEVMANIEAKYHLNDP 567
M FILRR L+ +P L + F ++RLAPG P++G + P + + ++ L+ P
Sbjct: 1 MAGFILRRLLQLVPMLLGASLLIFAVIRLAPGDPYSGLVDPRADPAKIEELRRRHCLDCP 60
Query: 568 IMTQYFQ 588
+ QY++
Sbjct: 61 LPQQYWR 67
>UniRef50_A6TPV5 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=1; Alkaliphilus
metalliredigens QYMF|Rep: Binding-protein-dependent
transport systems inner membrane component -
Alkaliphilus metalliredigens QYMF
Length = 306
Score = 42.3 bits (95), Expect = 0.011
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Frame = +1
Query: 403 FILRRCLEAIPTLFILITISFFMMRLAPGSPF---TGELTLPPEVMANIEAKYHLNDPIM 573
+I +R L+AIP +F++ I+F ++ L PG P GE +V A EA LN+PI
Sbjct: 4 YIAKRLLQAIPVIFLVTVITFSLIHLMPGDPAIMRAGEGASIEQVEAIREA-MGLNEPIH 62
Query: 574 TQYFQLPENNWAHG*FSGPSXLNIKD 651
QY +W G G +++D
Sbjct: 63 QQYL-----SWVTGLLQGDLGYSLQD 83
>UniRef50_A5NUI3 Cluster: Extracellular solute-binding protein,
family 5 precursor; n=2; Alphaproteobacteria|Rep:
Extracellular solute-binding protein, family 5 precursor
- Methylobacterium sp. 4-46
Length = 531
Score = 42.3 bits (95), Expect = 0.011
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLS-NSSMNTAHYKSPAFDSIMAETLKVTDEA 136
W ADY +P +FL + S N N+ HY +PA+D++M E D A
Sbjct: 431 WIADYADPQNFLFLVESDNDGFNSGHYANPAYDALMREAAGTVDLA 476
>UniRef50_A4ALV3 Cluster: ABC transporter, membrane spanning
protein; n=1; marine actinobacterium PHSC20C1|Rep: ABC
transporter, membrane spanning protein - marine
actinobacterium PHSC20C1
Length = 315
Score = 42.3 bits (95), Expect = 0.011
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPF---TGELTLPPEVMANIEAKYHLND 564
ML+F+ RR L IP L + + F + L PG G PE++A A+ L+D
Sbjct: 1 MLRFVSRRLLALIPQLLVASLVIFILTALMPGDAAIARAGGENATPELIAEYRAQLGLDD 60
Query: 565 PIMTQYFQLPEN 600
P+ ++F N
Sbjct: 61 PLYLRFFHFVGN 72
>UniRef50_A4AFN4 Cluster: Putative ABC transporter, permease; n=1;
marine actinobacterium PHSC20C1|Rep: Putative ABC
transporter, permease - marine actinobacterium PHSC20C1
Length = 340
Score = 42.3 bits (95), Expect = 0.011
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +1
Query: 370 RHRPEGRAMLKFILRRCLEAIPTLFILITISFFMMRLAPGS---PFTGELTLPPEVMANI 540
R RP GR ++ R L + L +L I F M+ LAPG G P+ +A I
Sbjct: 22 RARPLGRMLVV----RVLGTLGILLVLSIIVFSMLHLAPGDIVKNLLGNRPSSPDAVAAI 77
Query: 541 EAKYHLNDPIMTQY 582
A+YHL+ P+ QY
Sbjct: 78 RAQYHLDQPLYMQY 91
>UniRef50_A3I7A4 Cluster: Oligopeptide ABC transporter, permease;
n=2; Firmicutes|Rep: Oligopeptide ABC transporter,
permease - Bacillus sp. B14905
Length = 321
Score = 42.3 bits (95), Expect = 0.011
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +1
Query: 382 EGRAMLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELT--LPPEVMANIEAKYH 555
E AML++I +R L+++ TLFI+ITI F ++RL P + G + P
Sbjct: 4 EDGAMLQYIGKRLLQSVLTLFIIITIVFSLLRLMPEEGYLGAAADKMSPAQQEIYLTNLG 63
Query: 556 LNDPIMTQ 579
L DP++ Q
Sbjct: 64 LRDPLLIQ 71
>UniRef50_A3EWA7 Cluster: ABC-type oligopeptide transport system,
periplasmic component; n=1; Leptospirillum sp. Group II
UBA|Rep: ABC-type oligopeptide transport system,
periplasmic component - Leptospirillum sp. Group II UBA
Length = 532
Score = 42.3 bits (95), Expect = 0.011
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAETLKVTDE 133
W ADY +P +F+ M++ S N + SP FD ++ + + +DE
Sbjct: 425 WMADYPDPNTFMTLMMTGSGNNRTGWSSPEFDRLVKDAVSTSDE 468
>UniRef50_A2TW67 Cluster: Dipeptide ABC transporter; n=7;
Bacteroidetes|Rep: Dipeptide ABC transporter - Dokdonia
donghaensis MED134
Length = 358
Score = 42.3 bits (95), Expect = 0.011
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTL--PPEVMANIEAKYHLNDP 567
M+K ++ + A+ TL+ ++T+ FF+ + PG P L PE +A + AKY + P
Sbjct: 1 MVKQLIYKLGYALLTLWGVVTVIFFLFTVLPGDPARMMLDQNEDPEQLAKVRAKYGFDKP 60
Query: 568 IMTQY 582
+ TQY
Sbjct: 61 VSTQY 65
>UniRef50_Q18K39 Cluster: ABC-type dipeptide/oligopeptide/nickel
transport system, permease protein I; n=1; Haloquadratum
walsbyi DSM 16790|Rep: ABC-type
dipeptide/oligopeptide/nickel transport system, permease
protein I - Haloquadratum walsbyi (strain DSM 16790)
Length = 319
Score = 42.3 bits (95), Expect = 0.011
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +1
Query: 400 KFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGEL--TLPPEVMANIEAKYHLNDPIM 573
++I +R L+AI ++I+ T F +R PG P L T P+ +A + A+ LN P+
Sbjct: 5 RYIAKRVLQAIIVVYIVATAVFVAVRSVPGDPARLVLGGTAEPDALAAVRAELGLNQPLH 64
Query: 574 TQYFQ 588
QY +
Sbjct: 65 IQYLR 69
>UniRef50_A7CU81 Cluster: Extracellular solute-binding protein
family 5; n=1; Opitutaceae bacterium TAV2|Rep:
Extracellular solute-binding protein family 5 -
Opitutaceae bacterium TAV2
Length = 569
Score = 41.9 bits (94), Expect = 0.014
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAETLKVTDEA 136
W DYN+P +FL+ ++ N + +PA+D +AE T+ A
Sbjct: 464 WVGDYNDPNTFLDMFITGGGNNQTAWSNPAYDRAIAEAASATERA 508
>UniRef50_A5ZYP1 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus obeum ATCC 29174|Rep: Putative
uncharacterized protein - Ruminococcus obeum ATCC 29174
Length = 314
Score = 41.9 bits (94), Expect = 0.014
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFT-----GELTLPPEVMANIEAKYHL 558
M+K+I++R L+ IP L + +SF MMRLA G T + EV+ +Y L
Sbjct: 1 MIKYIIKRLLQLIPILVGITFLSFAMMRLAGGDAVTYMYENAGSAVSQEVIDETRKEYGL 60
Query: 559 NDPIMTQY 582
+ P + QY
Sbjct: 61 DQPFLVQY 68
>UniRef50_Q8RC38 Cluster: ABC-type dipeptide/oligopeptide/nickel
transport systems, periplasmic components; n=4;
Thermoanaerobacter tengcongensis|Rep: ABC-type
dipeptide/oligopeptide/nickel transport systems,
periplasmic components - Thermoanaerobacter
tengcongensis
Length = 549
Score = 41.5 bits (93), Expect = 0.019
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAETLKVTDEA 136
W ADYN+P +FL+ ++ N+A Y +P +D ++ + D A
Sbjct: 446 WGADYNDPMTFLDLWVTGGGNNSARYSNPKYDELIKKANSTNDNA 490
>UniRef50_Q8KJ79 Cluster: PUTATIVE ABC TRANSPORTER PERMEASE PROTEIN
OLIGOPEPTIDE; n=1; Mesorhizobium loti|Rep: PUTATIVE ABC
TRANSPORTER PERMEASE PROTEIN OLIGOPEPTIDE - Rhizobium
loti (Mesorhizobium loti)
Length = 303
Score = 41.5 bits (93), Expect = 0.019
Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Frame = +1
Query: 403 FILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPPEV----MANIEAKYHLNDPI 570
F + R L + TL+ ++TI FF RL G P TG L +PPE+ + AK LND I
Sbjct: 2 FFISRALRSALTLWAILTIVFFATRLT-GDP-TGFL-MPPEMPEAQRIELRAKLGLNDDI 58
Query: 571 MTQYFQLPE 597
TQY + E
Sbjct: 59 ATQYLRYGE 67
>UniRef50_A4N522 Cluster: Dipeptide transporter ATP-binding protein;
n=2; Haemophilus influenzae|Rep: Dipeptide transporter
ATP-binding protein - Haemophilus influenzae R3021
Length = 149
Score = 41.5 bits (93), Expect = 0.019
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSP---FTGELTLPPEVMANIEAKYHLND 564
M KF+ +R L IPT + I+F ++ PG P GE L EV + + L+
Sbjct: 1 MFKFVFKRILMVIPTFIAITLITFALVHFIPGDPVEILMGERGLTAEVHQQMMHQLGLDL 60
Query: 565 PIMTQYF 585
P+ QYF
Sbjct: 61 PLYQQYF 67
>UniRef50_P33591 Cluster: Nickel transport system permease protein
nikB; n=25; Proteobacteria|Rep: Nickel transport system
permease protein nikB - Escherichia coli (strain K12)
Length = 314
Score = 41.5 bits (93), Expect = 0.019
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTL-----PPEVMANIEAKYHL 558
ML+++LRR L IP + I F M+RL G P L L PE++A+ L
Sbjct: 1 MLRYVLRRFLLLIPMVLAASVIIFLMLRLGTGDPALDYLRLSNLPPTPEMLASTRTMLGL 60
Query: 559 NDPIMTQY 582
+ P+ QY
Sbjct: 61 DQPLYVQY 68
>UniRef50_P45096 Cluster: Dipeptide transport system permease
protein dppB; n=164; Bacteria|Rep: Dipeptide transport
system permease protein dppB - Haemophilus influenzae
Length = 333
Score = 41.5 bits (93), Expect = 0.019
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSP---FTGELTLPPEVMANIEAKYHLND 564
M KF+ +R L IPT + I+F ++ PG P GE L EV + + L+
Sbjct: 1 MFKFVFKRILMVIPTFIAITLITFALVHFIPGDPVEIMMGERGLTAEVHQQMMHQLGLDL 60
Query: 565 PIMTQYF 585
P+ QYF
Sbjct: 61 PLYQQYF 67
>UniRef50_Q989T3 Cluster: ABC transporter, permease protein; n=2;
Rhizobiales|Rep: ABC transporter, permease protein -
Rhizobium loti (Mesorhizobium loti)
Length = 314
Score = 41.1 bits (92), Expect = 0.025
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSP---FTGELTLPPEVMANIEAKYHLND 564
M+++++ R L IP + ++ + F + L+PG G+ P ++ A I + HL+
Sbjct: 1 MIRYLITRMLSIIPVMGVVTAVVFGLTYLSPGDAAVVLAGDYASPAQIAA-IRERLHLDA 59
Query: 565 PIMTQYF 585
PI+ QYF
Sbjct: 60 PIVPQYF 66
>UniRef50_A6FAC7 Cluster: Peptide ABC transporter, permease protein,
putative; n=1; Moritella sp. PE36|Rep: Peptide ABC
transporter, permease protein, putative - Moritella sp.
PE36
Length = 356
Score = 41.1 bits (92), Expect = 0.025
Identities = 18/40 (45%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +1
Query: 394 MLKF-ILRRCLEAIPTLFILITISFFMMRLAPGSPFTGEL 510
ML F +RR L PTLF++I+++FF+++L PG P L
Sbjct: 7 MLNFYFIRRLLLVFPTLFVIISLNFFLLQLLPGGPVEAAL 46
>UniRef50_A5ZY64 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus obeum ATCC 29174|Rep: Putative
uncharacterized protein - Ruminococcus obeum ATCC 29174
Length = 334
Score = 41.1 bits (92), Expect = 0.025
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Frame = +1
Query: 412 RRCLEAIPTLFILITISFFMMRLAPGSP---FTGELT--LPPEVMANIEAKYHLNDPIMT 576
++CL + ++FIL F++ RLAPG P + G+ T + PE K LN+PI
Sbjct: 11 KKCLIFLISVFILSVAVFYVARLAPGDPLISYYGDRTEKMSPEEREWAMEKLGLNEPISV 70
Query: 577 QYFQLPENNWAHG*F 621
QY + +N + HG F
Sbjct: 71 QYVKWVKNAF-HGEF 84
>UniRef50_A0JYT0 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=31; Actinobacteria
(class)|Rep: Binding-protein-dependent transport systems
inner membrane component - Arthrobacter sp. (strain
FB24)
Length = 309
Score = 41.1 bits (92), Expect = 0.025
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFT---GELTLPPEVMANIEAKYHLND 564
M +IL+R L+ IP + +F++ PG P G+ + V A + A+YHL+
Sbjct: 1 MATYILKRFLQLIPVFLGATLLVYFLVFSLPGDPIVALFGDKPVNEAVAAQLRAQYHLDQ 60
Query: 565 PIMTQY 582
P QY
Sbjct: 61 PFWIQY 66
>UniRef50_Q5V0Q6 Cluster: Oligopeptide ABC transporter permease
protein; n=1; Haloarcula marismortui|Rep: Oligopeptide
ABC transporter permease protein - Haloarcula
marismortui (Halobacterium marismortui)
Length = 317
Score = 41.1 bits (92), Expect = 0.025
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = +1
Query: 391 AMLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPPEVM----ANIEAKYHL 558
++ +FI R +P LF + ++F ++ L PG P + L P++ A I A+Y L
Sbjct: 2 SLRRFIAVRVAATVPILFGVSVLTFALVHLTPGDPIDQMVALNPQISAAEEAAIRARYGL 61
Query: 559 NDPIMTQY 582
+ P+ QY
Sbjct: 62 DGPVWQQY 69
>UniRef50_Q894Y0 Cluster: Transport system permease, nickel or
dipeptide; n=1; Clostridium tetani|Rep: Transport system
permease, nickel or dipeptide - Clostridium tetani
Length = 316
Score = 40.7 bits (91), Expect = 0.033
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Frame = +1
Query: 397 LKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTL------PPEVMANIEAKYHL 558
LK++ ++ + AIP L + ISF + LAPG P LT E + + L
Sbjct: 5 LKYLFKKLIHAIPVLIGVSLISFMLGILAPGDPALQILTKDSISQPTKEEIYTLREDMGL 64
Query: 559 NDPIMTQY 582
NDPI+TQY
Sbjct: 65 NDPILTQY 72
>UniRef50_Q577U3 Cluster: Oligopeptide ABC transporter, periplasmic
oligopeptide-binding protein; n=18;
Alphaproteobacteria|Rep: Oligopeptide ABC transporter,
periplasmic oligopeptide-binding protein - Brucella
abortus
Length = 525
Score = 40.7 bits (91), Expect = 0.033
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAETLKVTD 130
W DYN+P +FL N S N A +K+ +D++MA+ K D
Sbjct: 426 WIGDYNDPQNFLYISQGNVSFNYAKWKNADYDALMAKAEKTQD 468
>UniRef50_Q0FSN8 Cluster: Peptide ABC transporter, permease protein;
n=2; Rhodobacteraceae|Rep: Peptide ABC transporter,
permease protein - Roseovarius sp. HTCC2601
Length = 306
Score = 40.3 bits (90), Expect = 0.044
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSP---FTGELTLPPEVMANIEAKYHLND 564
M KFIL+R A+ T++I ++ L PG P G PE + I + L+
Sbjct: 1 MGKFILQRLFAALVTIWIATIAVTILIHLVPGDPVRIMYGSFQTTPEELEAIRVRLGLDQ 60
Query: 565 PIMTQYFQLPE 597
PI TQY E
Sbjct: 61 PIWTQYLMYLE 71
>UniRef50_A6W3M0 Cluster: Extracellular solute-binding protein
family 5 precursor; n=2; Marinomonas|Rep: Extracellular
solute-binding protein family 5 precursor - Marinomonas
sp. MWYL1
Length = 536
Score = 40.3 bits (90), Expect = 0.044
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +1
Query: 142 TALYTKAEQ-QLDKDSAIVPVYYYVNARLVKPWVGGY 249
T Y KAE+ +++D A+ P+Y Y RLVK ++GGY
Sbjct: 482 TENYNKAEEIAIEQDMAVAPIYQYTEKRLVKSYLGGY 518
>UniRef50_A5EVS7 Cluster: Oligopeptide transport protein; n=1;
Dichelobacter nodosus VCS1703A|Rep: Oligopeptide
transport protein - Dichelobacter nodosus (strain
VCS1703A)
Length = 524
Score = 40.3 bits (90), Expect = 0.044
Identities = 15/38 (39%), Positives = 29/38 (76%)
Frame = +1
Query: 136 ARTALYTKAEQQLDKDSAIVPVYYYVNARLVKPWVGGY 249
AR +L +AE++L + +++P+Y++V+ +VKP+V GY
Sbjct: 470 ARASLLQQAERRLLDNYSLIPIYFFVSKHMVKPYVRGY 507
Score = 33.9 bits (74), Expect = 3.8
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAETLKVTDE-AHAQL 148
W DYN+ +FL+ +S NT FD ++A+ D+ A A L
Sbjct: 425 WVGDYNDANTFLDLFVSGGGSNTVGLADKEFDKLIAQAAGEQDQTARASL 474
>UniRef50_Q89KL0 Cluster: ABC transporter permease protein; n=5;
Rhizobiales|Rep: ABC transporter permease protein -
Bradyrhizobium japonicum
Length = 307
Score = 39.9 bits (89), Expect = 0.058
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGS-PFTGELTLPPEVMANIEAKYHLNDPI 570
ML F++RR L+ IPT+ ++ + F + + PGS T P+V A ++ + L++P+
Sbjct: 1 MLSFLIRRLLQTIPTVLAVVMLVFVLFSVVPGSIVSTMSDDSDPQVEARMKKQLGLDEPV 60
Query: 571 MTQY 582
++
Sbjct: 61 YLRF 64
>UniRef50_Q6AP16 Cluster: Probable oligopeptide ABC transporter,
permease protein; n=1; Desulfotalea psychrophila|Rep:
Probable oligopeptide ABC transporter, permease protein
- Desulfotalea psychrophila
Length = 317
Score = 39.9 bits (89), Expect = 0.058
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Frame = +1
Query: 403 FILRRCLEAIPTLFILITISFFMMRLAPGSPFTGEL--TLPPEVMANIEAKYHLNDPIMT 576
+I++R + ++P L ++I SFF++ + PG P L P E +A + L+ P++
Sbjct: 4 YIVKRAIHSLPLLVMVIVFSFFVIHIMPGDPIRTLLGDQAPAEQVARMTKNLGLDQPLVI 63
Query: 577 QY 582
Q+
Sbjct: 64 QF 65
>UniRef50_Q9ADY0 Cluster: DfpB; n=3; Agrobacterium tumefaciens|Rep:
DfpB - Agrobacterium tumefaciens
Length = 324
Score = 39.9 bits (89), Expect = 0.058
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Frame = +1
Query: 397 LKFILRRCLEAIPTLFILITISFFMMRLAPGSP---FTGELTLP-PEVMANIEAKYHLND 564
L + R+ L A L ++ T+ F +M + PG P G + P PE +A++ A+ L+
Sbjct: 8 LLLVARKLLTAFIQLLVVATLIFSVMYIMPGDPVLLLLGADSNPSPEAIASMRAQLGLDQ 67
Query: 565 PIMTQYF 585
P+++QYF
Sbjct: 68 PVISQYF 74
>UniRef50_Q15RH3 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=2;
Alteromonadales|Rep: Binding-protein-dependent transport
systems inner membrane component precursor -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 343
Score = 39.9 bits (89), Expect = 0.058
Identities = 31/85 (36%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSP---FTGELTLPPEVMANIEAKYHLND 564
MLK ILR I TLFIL SF + L PG P TG + A + +Y + D
Sbjct: 1 MLKIILRHVSLLILTLFILSFFSFSLAYLFPGDPLVNLTGIRDSSEQGYAILAQQYAMQD 60
Query: 565 PIMTQYFQ----LPENNWAHG*FSG 627
++QY+Q L NW SG
Sbjct: 61 SFLSQYWQYVNHLFSGNWGLSFSSG 85
>UniRef50_A7NQN7 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=1; Roseiflexus
castenholzii DSM 13941|Rep: Binding-protein-dependent
transport systems inner membrane component - Roseiflexus
castenholzii DSM 13941
Length = 307
Score = 39.9 bits (89), Expect = 0.058
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPG---SPFTGELTLPPEVMANIEAKYHLND 564
M ++++R L IP L ++ ++FF++ L PG S G+L + + M + LND
Sbjct: 1 MSAYLIQRVLLTIPILLGIVILTFFLVHLIPGDAVSAMQGQLKMSAQQMEQMREALGLND 60
Query: 565 PIMTQ 579
P+ Q
Sbjct: 61 PLHVQ 65
>UniRef50_A4ECM8 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 345
Score = 39.9 bits (89), Expect = 0.058
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFT---GELTLPPEVMANIEAKYHL 558
M K+I++R L+ IP + I F + + PG P G+ L PEV + +YHL
Sbjct: 1 MGKYIVKRVLQFIPVFLGVTLILFALQNIVPGDPIKLIGGDKALSPEVELQLRVRYHL 58
>UniRef50_A3VG50 Cluster: Dipeptide transport system permease
protein dppB; n=1; Rhodobacterales bacterium
HTCC2654|Rep: Dipeptide transport system permease
protein dppB - Rhodobacterales bacterium HTCC2654
Length = 336
Score = 39.9 bits (89), Expect = 0.058
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Frame = +1
Query: 403 FILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPPEVM--ANIEA---KYHLNDP 567
++L+R L IP L + I+FF++RL PG P L + PE A+I A + L+ P
Sbjct: 6 YVLKRLLLLIPVLIGVSLIAFFLIRLLPGDPV---LLIVPETATEADIAAARERLGLDQP 62
Query: 568 IMTQY 582
I+TQY
Sbjct: 63 ILTQY 67
>UniRef50_Q8YDG7 Cluster: Putative peptide transport system permease
protein BMEII0209; n=7; Proteobacteria|Rep: Putative
peptide transport system permease protein BMEII0209 -
Brucella melitensis
Length = 315
Score = 39.9 bits (89), Expect = 0.058
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSP---FTGELTLPPEVMANIEAKYHLND 564
M IL+R +AIP + I+ ++F +M+L PG P G+ PE + I + L+
Sbjct: 2 MTALILKRVAQAIPVMLIVAILTFLLMKLLPGDPAILIAGD-GASPETVERIRVELGLDQ 60
Query: 565 PIMTQYFQ 588
P + Q Q
Sbjct: 61 PTVVQLGQ 68
>UniRef50_Q8ZQM2 Cluster: Glutathione transport system permease
protein gsiC; n=68; Bacteria|Rep: Glutathione transport
system permease protein gsiC - Salmonella typhimurium
Length = 306
Score = 39.9 bits (89), Expect = 0.058
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPPE----VMANIEAKYHLN 561
ML ++L+R L IPTL I+ + F + L PG P L PE V+A + + L+
Sbjct: 1 MLNYVLKRLLGLIPTLLIVAVLVFLFVHLLPGDP--ARLIAGPEADAQVIALVRQQLGLD 58
Query: 562 DPIMTQYF 585
P+ Q++
Sbjct: 59 QPLHVQFW 66
>UniRef50_Q83N24 Cluster: Dipeptide transport system permease
protein; n=2; Tropheryma whipplei|Rep: Dipeptide
transport system permease protein - Tropheryma whipplei
(strain Twist) (Whipple's bacillus)
Length = 332
Score = 39.5 bits (88), Expect = 0.077
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +1
Query: 400 KFILRRCLEAIPTLFILITISFFMMRLAPGSPFT---GELTLPPEVMANIEAKYHLNDPI 570
+++L R L+ +P + + ++ L PG P G+ P+V+A I +Y+L+ P
Sbjct: 24 RYVLFRLLQFVPVFVGATFLIYLLVFLMPGDPIAALFGDKRPSPDVVAAIREQYNLDKPF 83
Query: 571 MTQYF 585
+ QYF
Sbjct: 84 IVQYF 88
>UniRef50_Q5FMI1 Cluster: Peptide binding protein; n=8;
Lactobacillaceae|Rep: Peptide binding protein -
Lactobacillus acidophilus
Length = 542
Score = 39.5 bits (88), Expect = 0.077
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAETLKVT 127
W AD+++P SFL+ +N+S N Y +D ++AE+ KVT
Sbjct: 442 WTADFSDPISFLDLNTTNNSQNWEKYSDSTYDKLIAES-KVT 482
>UniRef50_A7CZU2 Cluster: Extracellular solute-binding protein
family 5 precursor; n=1; Opitutaceae bacterium TAV2|Rep:
Extracellular solute-binding protein family 5 precursor
- Opitutaceae bacterium TAV2
Length = 554
Score = 39.5 bits (88), Expect = 0.077
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAETLKVTDEA 136
W DY P SFL+ ++ N Y +PA+D ++A+ L D A
Sbjct: 454 WNGDYPAPYSFLDLWITGGGNNNTGYANPAYDRLLADALAAPDTA 498
>UniRef50_A4IPU6 Cluster: ABC transporter; n=1; Geobacillus
thermodenitrificans NG80-2|Rep: ABC transporter -
Geobacillus thermodenitrificans (strain NG80-2)
Length = 316
Score = 39.5 bits (88), Expect = 0.077
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGEL--TLPPEVMANIEAKYHLNDP 567
M +I+ R L IP L ++ ++FF++ L PG P L PE + + + LN P
Sbjct: 1 MKAYIVTRILSLIPVLLVVAIVAFFLIHLTPGDPAAVMLGSQATPEEVEQLREQLGLNLP 60
Query: 568 IMTQYFQLPENNWAHG*FSG 627
+ Q+ NW G G
Sbjct: 61 LYEQF-----ANWFFGLLQG 75
>UniRef50_Q8TN12 Cluster: Peptide ABC transporter, permease protein;
n=1; Methanosarcina acetivorans|Rep: Peptide ABC
transporter, permease protein - Methanosarcina
acetivorans
Length = 347
Score = 39.5 bits (88), Expect = 0.077
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 16/115 (13%)
Frame = +1
Query: 379 PEGRAMLK------FILRRCLEAIPTLFILITISFFMMRLAPGSPFTGEL----TLPPEV 528
P G+AM K F+L + L +FI+++++F + R+ PG P + +
Sbjct: 12 PGGKAMAKIGEKKAFLLHKSLRYALVIFIILSVNFLLPRMMPGDPIQTMVHQNRYVDDST 71
Query: 529 MANIEAKYHLNDPIMTQYFQLPENNWAH---G*FSGPSXLNIKDLFGQ---WTLV 675
+ + +Y LNDP+ QY + AH G FS + N+ D+ G+ WTL+
Sbjct: 72 IQALRDRYGLNDPLHVQYVKY-FYMLAHLDLG-FSLVTHKNVADMIGEKLFWTLL 124
>UniRef50_Q73N80 Cluster: Oligopeptide/dipeptide ABC transporter,
permease protein; n=1; Treponema denticola|Rep:
Oligopeptide/dipeptide ABC transporter, permease protein
- Treponema denticola
Length = 317
Score = 39.1 bits (87), Expect = 0.10
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = +1
Query: 397 LKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPPEVMANIEAKYH---LNDP 567
LK++++R L AIPT F+ IT +++ GSP L P + +E K + L+ P
Sbjct: 3 LKYVIKRLLIAIPT-FLGITFFTYLILSMAGSPLDAYLADPRITVMELERKRNSLGLDQP 61
Query: 568 IMTQYF 585
I+ QYF
Sbjct: 62 IIIQYF 67
>UniRef50_Q65SX8 Cluster: OppA protein; n=1; Mannheimia
succiniciproducens MBEL55E|Rep: OppA protein -
Mannheimia succiniciproducens (strain MBEL55E)
Length = 542
Score = 39.1 bits (87), Expect = 0.10
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAETLKVTDE 133
WCADYN+P++FLN + S + N + D ++ + + E
Sbjct: 437 WCADYNDPSAFLNLLYSKNPDNKTGFSQERVDKLLEKAQQTISE 480
>UniRef50_Q2JB54 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=1; Frankia
sp. CcI3|Rep: Binding-protein-dependent transport
systems inner membrane component precursor - Frankia sp.
(strain CcI3)
Length = 340
Score = 39.1 bits (87), Expect = 0.10
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Frame = +1
Query: 388 RAMLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGEL----TLPPEVMANIEAKYH 555
R +L+ +LR L T++F ++LAPG P L + P+V A I+A+Y
Sbjct: 28 RTVLRHLLRHLFSGAAVLLGAATLTFTALQLAPGDPVAVLLGPGTSASPQVRAEIQAEYG 87
Query: 556 LNDPIMTQY 582
L +P +Y
Sbjct: 88 LGEPAPLRY 96
>UniRef50_Q0SBH3 Cluster: ABC peptide transporter, permease
component; n=1; Rhodococcus sp. RHA1|Rep: ABC peptide
transporter, permease component - Rhodococcus sp.
(strain RHA1)
Length = 319
Score = 39.1 bits (87), Expect = 0.10
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSP--FTGELTLPPEVMANIEAKYHLNDP 567
M+ ++ RR A+ LF+ + F ++RL PGSP PE +A + A L+ P
Sbjct: 1 MVTYLARRLPSAVLVLFLASLLIFAILRLVPGSPEETLAGADASPEQLAAVRADLGLDRP 60
Query: 568 IMTQY 582
++ QY
Sbjct: 61 LVAQY 65
>UniRef50_Q0RID9 Cluster: ABC transporter permease; n=2; Frankia
alni ACN14a|Rep: ABC transporter permease - Frankia alni
(strain ACN14a)
Length = 305
Score = 39.1 bits (87), Expect = 0.10
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSP---FTGELTLPPEVMANIEAKYHLND 564
M + +L R L ++ L+ +T +F ++ L G+ + PEV A + ++Y L+D
Sbjct: 1 MARLVLTRVLASVAVLWGAVTATFLLLELMHGNTVDVMLAQSQAGPEVRAELISRYRLDD 60
Query: 565 PIMTQYF 585
P+ +YF
Sbjct: 61 PLPVRYF 67
>UniRef50_A1HNQ4 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=1;
Thermosinus carboxydivorans Nor1|Rep:
Binding-protein-dependent transport systems inner
membrane component precursor - Thermosinus
carboxydivorans Nor1
Length = 345
Score = 39.1 bits (87), Expect = 0.10
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +1
Query: 397 LKFILRRCLEAIPTLFILITISFFMMRLAPGSPFT--GELTLPPEVMANIEAKYHLNDPI 570
L F+ RR L+ + T+ ++ I+FF+ RL PG PF + E+ N++A ++
Sbjct: 18 LHFLKRRLLDYLLTIGFILVINFFLPRLLPGDPFAQLSGTGVGSEMAINLDA---ASEAA 74
Query: 571 MTQYFQLPENNW 606
+ QY+ L + W
Sbjct: 75 LRQYYGLDKPLW 86
>UniRef50_Q18KK8 Cluster: ABC-type dipeptide/oligopeptide/nickel
transport system, permease protein I; n=2;
Halobacteriaceae|Rep: ABC-type
dipeptide/oligopeptide/nickel transport system, permease
protein I - Haloquadratum walsbyi (strain DSM 16790)
Length = 335
Score = 39.1 bits (87), Expect = 0.10
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +1
Query: 400 KFILRRCLEAIPTLFILITISFFMMRLAPGSP--FTGELTLPPEVMANIEAKYHLNDPIM 573
+F+L+R + + ++ ++T+ F + + PGSP F L + I +Y LN P+
Sbjct: 5 RFLLKRASQGVVVIWGVVTVVFTLRYITPGSPVTFIAPLDASQALREEIAMEYGLNRPLY 64
Query: 574 TQYFQ 588
QY +
Sbjct: 65 VQYIE 69
>UniRef50_P36634 Cluster: Peptide transport periplasmic protein sapA
precursor; n=45; Enterobacteriaceae|Rep: Peptide
transport periplasmic protein sapA precursor -
Salmonella typhimurium
Length = 549
Score = 39.1 bits (87), Expect = 0.10
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLS----NSSMNTAHYKSPAFDSIMAETL 118
W D N+P SF +LS NS N AH+ +P FDS++ + L
Sbjct: 439 WATDSNDPDSFFRPLLSCAAINSQTNFAHWCNPEFDSVLRKAL 481
>UniRef50_Q8UKN0 Cluster: ABC transporter, membrane spanning
protein; n=4; Rhizobiaceae|Rep: ABC transporter,
membrane spanning protein - Agrobacterium tumefaciens
(strain C58 / ATCC 33970)
Length = 304
Score = 38.7 bits (86), Expect = 0.13
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPPEVMANIEAKYH----LN 561
ML+FI +R L ++ +L L+ + FF+ RL G P L LP E A ++A++ L+
Sbjct: 1 MLRFIRKRALASLISLIGLLIMVFFLSRLT-GDP--ASLFLPVEASAEMKAEFRALHGLD 57
Query: 562 DPIMTQYFQLPEN 600
P++ Q+ Q N
Sbjct: 58 QPLLVQFVQYVGN 70
>UniRef50_Q7M9E2 Cluster: NICKEL TRANSPORT SYSTEM PERMEASE; n=2;
Bacteria|Rep: NICKEL TRANSPORT SYSTEM PERMEASE -
Wolinella succinogenes
Length = 312
Score = 38.7 bits (86), Expect = 0.13
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPF-----TGELTLPPEVMANIEAKYHL 558
M +I+RR L P + + ++F ++ P P E+ P+ +A++ L
Sbjct: 1 MRNYIIRRLLLVFPMVLAISFVAFILISFIPSDPAEVALRVNEIVPTPQAIADMRESLGL 60
Query: 559 NDPIMTQYFQLPEN 600
NDP+ +YF +N
Sbjct: 61 NDPLWVRYFHWLQN 74
>UniRef50_Q41GQ8 Cluster: Extracellular solute-binding protein,
family 5 precursor; n=3; Exiguobacterium sibiricum
255-15|Rep: Extracellular solute-binding protein, family
5 precursor - Exiguobacterium sibiricum 255-15
Length = 549
Score = 38.7 bits (86), Expect = 0.13
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAETLKVTDEA 136
W DY +P +FL+ +++ N Y S +DS++ +K TD A
Sbjct: 447 WGPDYQDPMTFLDMWMTDGPYNRGKYTSDKYDSLIKSAMKETDAA 491
>UniRef50_Q1QT65 Cluster: Extracellular solute-binding protein,
family 5 precursor; n=1; Chromohalobacter salexigens DSM
3043|Rep: Extracellular solute-binding protein, family 5
precursor - Chromohalobacter salexigens (strain DSM 3043
/ ATCC BAA-138 / NCIMB13768)
Length = 549
Score = 38.7 bits (86), Expect = 0.13
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAETLKVTDEAHAQLCTLKQNNSWI- 178
W ADYN+ +FL + S N Y +P +D+++A+ V D + K N +
Sbjct: 450 WIADYNDAENFLTLLRSGVGNNYGGYANPEYDALLAQAATVRDLDEREALLEKAENVALD 509
Query: 179 --RIRPLFLFIT 208
+ PL ++T
Sbjct: 510 DYALVPLLYYVT 521
Score = 34.7 bits (76), Expect = 2.2
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +1
Query: 139 RTALYTKAEQQLDKDSAIVPVYYYVNARLVKPWVGGY 249
R AL KAE D A+VP+ YYV LV P + G+
Sbjct: 496 REALLEKAENVALDDYALVPLLYYVTRNLVNPDISGW 532
>UniRef50_Q1LMX8 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=6;
Burkholderiales|Rep: Binding-protein-dependent transport
systems inner membrane component precursor - Ralstonia
metallidurans (strain CH34 / ATCC 43123 / DSM 2839)
Length = 340
Score = 38.7 bits (86), Expect = 0.13
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Frame = +1
Query: 397 LKFILRRCLEAIPTLFILITISFFMMRLAPGSPFT---GELTL-PPEVMANIEAKYHLND 564
L F L R ++A+ + ++ I+FF++R+APG P T GE + + ++ L+
Sbjct: 10 LSFFLSRLVKALVVVIGVVVINFFLIRMAPGDPATVMAGEAGAGDATYVTQLREQFGLDQ 69
Query: 565 PIMTQ 579
P++TQ
Sbjct: 70 PVLTQ 74
>UniRef50_Q53191 Cluster: Probable peptide ABC transporter permease
protein y4tP; n=45; Proteobacteria|Rep: Probable peptide
ABC transporter permease protein y4tP - Rhizobium sp.
(strain NGR234)
Length = 313
Score = 38.7 bits (86), Expect = 0.13
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +1
Query: 403 FILRRCLEAIPTLFILITISFFMMRLAPGSP--FTGELTLPPEVMANIEAKYHLNDPIMT 576
+ILRR + I + ++ F ++RLAPG P T +++ANI + LN+P+
Sbjct: 4 YILRRLVSTIAVMAMVGIFIFLLLRLAPGDPAAVIAGPTATEQMVANIREELGLNEPLPV 63
Query: 577 QY 582
Q+
Sbjct: 64 QF 65
>UniRef50_Q8DPF3 Cluster: ABC transporter membrane-spanning
permease-oligopeptide transport; n=4; Streptococcus
pneumoniae|Rep: ABC transporter membrane-spanning
permease-oligopeptide transport - Streptococcus
pneumoniae (strain ATCC BAA-255 / R6)
Length = 331
Score = 38.3 bits (85), Expect = 0.18
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFT----GELTLPPEVMANIEAKYHLN 561
M K+IL++ L IP L I+ + F + L P P T ++ E + + + LN
Sbjct: 16 MKKYILKKVLFMIPMLLIISFLVFIALDLTPADPLTYMVSPDMASSAEQIEKLRQQLGLN 75
Query: 562 DPIMTQY 582
DP++ +Y
Sbjct: 76 DPVLVRY 82
>UniRef50_Q89VQ3 Cluster: Peptide ABC transporter permease protein;
n=1; Bradyrhizobium japonicum|Rep: Peptide ABC
transporter permease protein - Bradyrhizobium japonicum
Length = 315
Score = 38.3 bits (85), Expect = 0.18
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGS----PFTGELTLPPEVMANIEAKYHLN 561
M +++RR + TLF + + FF++R+ PG+ F + P AN+E + ++
Sbjct: 1 MFAYLVRRLFLMLVTLFGISVVIFFLLRIVPGNIVDILFAAAGYVDPADKANLEKELGID 60
Query: 562 DPIMTQYF 585
P++ QY+
Sbjct: 61 QPLVVQYW 68
>UniRef50_Q5WKK0 Cluster: Oligopeptide ABC transporter permease;
n=3; Firmicutes|Rep: Oligopeptide ABC transporter
permease - Bacillus clausii (strain KSM-K16)
Length = 321
Score = 38.3 bits (85), Expect = 0.18
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPPEVMANIEA 546
M+ F+ +R L+ IPTLF++ + F + RL PG P + L P + ++EA
Sbjct: 1 MIHFVGKRLLDLIPTLFVVSLVIFIITRLLPGDPASVMLG-PQASVEDVEA 50
>UniRef50_A5FXR6 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=1;
Acidiphilium cryptum JF-5|Rep: Binding-protein-dependent
transport systems inner membrane component precursor -
Acidiphilium cryptum (strain JF-5)
Length = 314
Score = 38.3 bits (85), Expect = 0.18
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +1
Query: 406 ILRRCLEAIPTLFILITISFFMMRLAPGSPFTGEL--TLPPEVMANIEAKYHLNDPIMTQ 579
IL R + TL +L+TI FFM+ PG P L PE + + + L+ P+ Q
Sbjct: 2 ILSRLAASALTLVLLVTIVFFMVHATPGGPAYSILGQKATPEAVRQLNVRLGLSAPLWRQ 61
Query: 580 YFQLPENNWAH 612
Y WAH
Sbjct: 62 YLVW----WAH 68
>UniRef50_Q978R0 Cluster: ABC transport system permease protein
P1P2A1A2; n=1; Thermoplasma volcanium|Rep: ABC transport
system permease protein P1P2A1A2 - Thermoplasma
volcanium
Length = 363
Score = 38.3 bits (85), Expect = 0.18
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 13/98 (13%)
Frame = +1
Query: 403 FILRRCLEAIPTLFILITISFFMMRLAPGSPFTGEL-----TLPPEV-MANIEAKYHLND 564
FI+RR L IPTL L ++F ++R P S + TLP V +A+ +A L+
Sbjct: 6 FIIRRLLLLIPTLIGLTLLTFILVRALPTSLLLSQYVNPHSTLPRSVQIAHAKAILGLDY 65
Query: 565 PIMTQYF----QLPENNW---AHG*FSGPSXLNIKDLF 657
P+ QYF L NW ++GP I++ F
Sbjct: 66 PVPIQYFFYLAALIHGNWGFMVSNFYTGPVLTGIEEFF 103
>UniRef50_Q2FH55 Cluster: Putative oligopeptide transport system
permease protein oppB2; n=15; Staphylococcus|Rep:
Putative oligopeptide transport system permease protein
oppB2 - Staphylococcus aureus (strain USA300)
Length = 328
Score = 38.3 bits (85), Expect = 0.18
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTL-----PPEVMANIEAKYHL 558
++K +L R ++ I LF++ T++F +M+L+PG+P L L E + + K L
Sbjct: 3 IIKSMLYRLMQMIVVLFVISTLTFILMKLSPGNPVDKILHLDVAQVSTEQINATKDKLGL 62
Query: 559 NDPIMTQYF 585
ND ++ Q++
Sbjct: 63 NDSLLVQWW 71
>UniRef50_Q9WZ02 Cluster: Oligopeptide ABC transporter, permease
protein; n=4; Thermotogaceae|Rep: Oligopeptide ABC
transporter, permease protein - Thermotoga maritima
Length = 321
Score = 37.9 bits (84), Expect = 0.24
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPPEV----MANIEAKYHLN 561
MLK+I RR + IP L I+ I F +M APG F L P V + +E + L+
Sbjct: 1 MLKYIARRLIIMIPELIIISFIVFIIMEAAPGD-FLDMYRLDPSVSQQFLEKMEKELGLD 59
Query: 562 DPIMTQY 582
P + QY
Sbjct: 60 KPWIVQY 66
>UniRef50_Q9KBX7 Cluster: Nickel ABC transporter; n=2; Bacillus|Rep:
Nickel ABC transporter - Bacillus halodurans
Length = 315
Score = 37.9 bits (84), Expect = 0.24
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPF-----TGELTLPPEVMANIEAKYHL 558
M++ +RR LE + + +SF +RLAPG P EL++ E + +
Sbjct: 1 MVRIFIRRLLEVALFVLFVTFVSFLFVRLAPGDPVLTILNVDELSVSQEEVETLREDMGF 60
Query: 559 NDPIMTQY 582
N P++ QY
Sbjct: 61 NKPLLVQY 68
>UniRef50_Q8EUP3 Cluster: Oligopeptide ABC transporter permease
protein; n=1; Mycoplasma penetrans|Rep: Oligopeptide ABC
transporter permease protein - Mycoplasma penetrans
Length = 414
Score = 37.9 bits (84), Expect = 0.24
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFT---GELTLPPEVMANIEAKYHLND 564
M K+I++R L A+ LFIL++I FF+M P P T GE T A +E+ D
Sbjct: 1 MAKYIIKRLLFAVLALFILMSIVFFLMAALPTIPITRVQGETT--EAYNAKLES-IGWFD 57
Query: 565 PIMTQYFQ 588
P + +YF+
Sbjct: 58 PAIIRYFK 65
>UniRef50_Q3E296 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=1; Chloroflexus
aurantiacus J-10-fl|Rep: Binding-protein-dependent
transport systems inner membrane component -
Chloroflexus aurantiacus J-10-fl
Length = 323
Score = 37.9 bits (84), Expect = 0.24
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPG---SPFTGELTLPPEVMANIEAKYHLND 564
M ++LRR L+A+ TLF++ I F ++ + PG + + + + +A I A L+D
Sbjct: 1 MTTYLLRRLLQAVLTLFVVSLILFGLISVTPGGFMTVYAEKSDMTAADLARIRANLGLDD 60
Query: 565 PIMTQY 582
P+ +Y
Sbjct: 61 PVPIRY 66
>UniRef50_Q3E221 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=2; Chloroflexus|Rep:
Binding-protein-dependent transport systems inner
membrane component - Chloroflexus aurantiacus J-10-fl
Length = 336
Score = 37.9 bits (84), Expect = 0.24
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGE---LTLPPEVMANIEAKYHLND 564
M +I+RR L IP L I+ I+F + +L PG PF + L P V A + ++ ++
Sbjct: 3 MTAYIIRRILWNIPVLIIVGFITFGIAKLTPGGPFDTQPERRQLSPRVEAILRERFGMDL 62
Query: 565 PIMTQY 582
P Q+
Sbjct: 63 PFWRQF 68
>UniRef50_Q12DJ8 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=9;
Proteobacteria|Rep: Binding-protein-dependent transport
systems inner membrane component precursor - Polaromonas
sp. (strain JS666 / ATCC BAA-500)
Length = 314
Score = 37.9 bits (84), Expect = 0.24
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSP---FTGELTLPPEVMANIEAKYHLND 564
ML+F L R AIPTL I+ F ++RL PG P G+L P +A++ A+ L+
Sbjct: 1 MLRFALSRLAMAIPTLLIVAVAVFVLIRLIPGDPAQLLLGDLA-DPVRLADLRAQLGLDK 59
Query: 565 PIMTQY 582
Q+
Sbjct: 60 SWPVQF 65
>UniRef50_Q0SEK6 Cluster: ABC peptide transporter, permease
component; n=8; Bacteria|Rep: ABC peptide transporter,
permease component - Rhodococcus sp. (strain RHA1)
Length = 330
Score = 37.9 bits (84), Expect = 0.24
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGEL-------TLPPEVMANIEAKY 552
M++++ R L+AI L+ T+SF ++ L P P + + T+ +A ++A+Y
Sbjct: 1 MIRYLGLRVLQAIAVLWATFTVSFAVLFLLPSDPVSIAVDSASTGTTVDAAAVAELQARY 60
Query: 553 HLNDPIMTQYF 585
L+ P+ QY+
Sbjct: 61 GLDQPVWVQYW 71
>UniRef50_Q0LIZ3 Cluster: Extracellular solute-binding protein,
family 5 precursor; n=1; Herpetosiphon aurantiacus ATCC
23779|Rep: Extracellular solute-binding protein, family
5 precursor - Herpetosiphon aurantiacus ATCC 23779
Length = 535
Score = 37.9 bits (84), Expect = 0.24
Identities = 20/45 (44%), Positives = 29/45 (64%)
Frame = +1
Query: 115 AESD*RGARTALYTKAEQQLDKDSAIVPVYYYVNARLVKPWVGGY 249
AE+D R ALY +AE+QL D ++P+ + V+ LVK +V GY
Sbjct: 475 AEAD-AEKRGALYRQAEEQLLSDFVVIPLVHTVDYSLVKSYVDGY 518
>UniRef50_Q0LEX9 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=5; Bacteria|Rep:
Binding-protein-dependent transport systems inner
membrane component - Herpetosiphon aurantiacus ATCC
23779
Length = 325
Score = 37.9 bits (84), Expect = 0.24
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Frame = +1
Query: 397 LKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTG-----ELTLPPEVMANIEAKYHLN 561
++F+LRR ++ +T++F++ RL PG P + + L PE + ++ Y L+
Sbjct: 1 MRFLLRRLGFYAVAAWVSLTVNFYLPRLMPGDPASAIFARFQGRLRPEEIDSLRKAYGLS 60
Query: 562 D-PIMTQYF 585
D P++ QYF
Sbjct: 61 DAPLLEQYF 69
>UniRef50_A3ZYC1 Cluster: Oligopeptide-binding protein OppA; n=1;
Blastopirellula marina DSM 3645|Rep:
Oligopeptide-binding protein OppA - Blastopirellula
marina DSM 3645
Length = 666
Score = 37.9 bits (84), Expect = 0.24
Identities = 16/47 (34%), Positives = 30/47 (63%)
Frame = +1
Query: 139 RTALYTKAEQQLDKDSAIVPVYYYVNARLVKPWVGGYTGKIRWIIPI 279
R + ++AEQ L + I+P+YYYV+ +V+P+V + I+ + P+
Sbjct: 600 RLEMLSQAEQILMDEMPILPIYYYVSLNIVRPYVKNFYPNIQDLHPL 646
>UniRef50_Q8THB7 Cluster: Oligopeptide ABC transporter, permease
protein; n=2; Methanosarcina|Rep: Oligopeptide ABC
transporter, permease protein - Methanosarcina
acetivorans
Length = 332
Score = 37.9 bits (84), Expect = 0.24
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
Frame = +1
Query: 406 ILRRCLEAIPTLFILITISFFMMRLAPGSPF---TGELTLPPEVMANIEAK------YHL 558
I R LE T F+++ ++FF+ R PG P G + V+ + E K YHL
Sbjct: 10 IFSRGLEYALTFFLILAVNFFLPRFMPGGPLLSVLGSQSADLPVVIDEETKLKLMDYYHL 69
Query: 559 NDPIMTQY 582
NDP+ Q+
Sbjct: 70 NDPLHLQF 77
>UniRef50_Q6MQU8 Cluster: Peptide ABC transporter, permease protein
precursor; n=1; Bdellovibrio bacteriovorus|Rep: Peptide
ABC transporter, permease protein precursor -
Bdellovibrio bacteriovorus
Length = 343
Score = 37.5 bits (83), Expect = 0.31
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGEL 510
M+ +++RR L IPT F + ++F ++ LAPGSP +L
Sbjct: 1 MIVYLIRRLLLMIPTFFGITIMTFVLINLAPGSPIEQKL 39
>UniRef50_Q30Y57 Cluster: Oligopeptide ABC transporter, permease
protein; n=4; Proteobacteria|Rep: Oligopeptide ABC
transporter, permease protein - Desulfovibrio
desulfuricans (strain G20)
Length = 343
Score = 37.5 bits (83), Expect = 0.31
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +1
Query: 412 RRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPPEVMAN----IEAKYHLNDPIMTQ 579
RR L + + + ISF ++ LAPGSP + TL P+ A+ +E Y L+ P+ Q
Sbjct: 22 RRLLWVMAVFWGITLISFAVIHLAPGSPTDLQTTLNPQAGADARMRLEKLYGLDQPLHVQ 81
Query: 580 YFQ 588
Y Q
Sbjct: 82 YGQ 84
>UniRef50_Q3VYQ6 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=7; Bacteria|Rep:
Binding-protein-dependent transport systems inner
membrane component - Frankia sp. EAN1pec
Length = 319
Score = 37.5 bits (83), Expect = 0.31
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGEL--------TLPPEVMANIEAK 549
M +++L R +A+ L+ T++F ++ L P P +L L PE + A+
Sbjct: 1 MTRYVLGRFAQALVVLWAAYTVTFAVLYLLPSDPVALQLGAAGIETDKLTPEQLNTAMAQ 60
Query: 550 YHLNDPIMTQYF 585
Y L+ P++ QYF
Sbjct: 61 YGLDRPVLNQYF 72
>UniRef50_A0KM52 Cluster: Periplasmic murein peptide-binding
protein; n=2; Aeromonas|Rep: Periplasmic murein
peptide-binding protein - Aeromonas hydrophila subsp.
hydrophila (strain ATCC 7966 / NCIB 9240)
Length = 587
Score = 37.5 bits (83), Expect = 0.31
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +1
Query: 136 ARTALYTKAEQQLDKDSAIVPVYYYVNARLVKPWVGG 246
ART LY +AEQ L + +PVY+Y RLV P + G
Sbjct: 531 ARTGLYHQAEQLLMDEMPAIPVYHYNQMRLVDPTLRG 567
>UniRef50_A7D4N6 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Binding-protein-dependent
transport systems inner membrane component - Halorubrum
lacusprofundi ATCC 49239
Length = 339
Score = 37.5 bits (83), Expect = 0.31
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +1
Query: 391 AMLKFILRRCLEAIPTLFILITISFFMMRLAPGSP--FTGELTLPPEVMANIEAKYHLND 564
A+ +F+L+R ++ + ++ ++T F + + PG+P F L E+ A I A L+
Sbjct: 2 ALGRFLLKRGIQGVLVVWGVVTAVFLLRFITPGNPVTFVAPLDASAELRAQIAADLGLDQ 61
Query: 565 PIMTQY 582
P+ QY
Sbjct: 62 PLYIQY 67
>UniRef50_P47323 Cluster: Oligopeptide transport system permease
protein oppB; n=5; Mycoplasma|Rep: Oligopeptide
transport system permease protein oppB - Mycoplasma
genitalium
Length = 407
Score = 37.5 bits (83), Expect = 0.31
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLP-PEVMANIEAKYHLNDPI 570
M K+IL+R A+ +FI+++I FF++ P + V A ++ ++ NDPI
Sbjct: 1 MFKYILKRLGLAVVAMFIVMSIVFFLVNATGNVPLSATSARDIAAVQAQLQ-EFGFNDPI 59
Query: 571 MTQYFQ 588
+ +YF+
Sbjct: 60 IVRYFR 65
>UniRef50_Q9KB56 Cluster: Oligopeptide ABC transporter; n=16;
Bacillales|Rep: Oligopeptide ABC transporter - Bacillus
halodurans
Length = 310
Score = 37.1 bits (82), Expect = 0.41
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSP------FTGELTLPPEVMANIEAKYH 555
M ++++R IP LFI+ ++F + L+P P G T+ E++A + +
Sbjct: 1 MGSYVMKRLFSVIPLLFIISFLTFVFINLSPLDPAEVVLQAQGVPTITDELIAQTKQELG 60
Query: 556 LNDPIMTQYF 585
L+ P + QYF
Sbjct: 61 LDQPFLIQYF 70
>UniRef50_Q98BT0 Cluster: ABC transporter, permease protein; n=5;
Proteobacteria|Rep: ABC transporter, permease protein -
Rhizobium loti (Mesorhizobium loti)
Length = 335
Score = 37.1 bits (82), Expect = 0.41
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPP----EVMANIEAKYHLN 561
+L+ L R L + TLF + + F ++R+APG P + LPP + +A + A Y L+
Sbjct: 2 LLQRFLIRLLTMLITLFGVAVVVFVVIRVAPGDPIA--MMLPPGATDDDIARLRALYGLD 59
Query: 562 DPIMTQYF 585
I+ Q+F
Sbjct: 60 KTIVQQFF 67
>UniRef50_Q8UAE0 Cluster: ABC transporter, membrane spanning
protein; n=11; Proteobacteria|Rep: ABC transporter,
membrane spanning protein - Agrobacterium tumefaciens
(strain C58 / ATCC 33970)
Length = 347
Score = 37.1 bits (82), Expect = 0.41
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Frame = +1
Query: 412 RRCLEAIPTLFILITISFFMMRLAPGSP---FTGEL-TLPPEVMANIEAKYHLNDPIMTQ 579
R ++A+PT+ ++ ++FF+++LAPG E + E MA + +++ L+ PI+ Q
Sbjct: 31 RVAIQAVPTVLGIVILNFFLLQLAPGDAADVLAAEAGSATVETMAEMRSRFGLDLPIVHQ 90
Query: 580 YFQLPEN--NWAHG*FSGPSXLNIKDLFGQ 663
N ++ G FS + + DL GQ
Sbjct: 91 LMNYLGNLAQFSLG-FSPRYGMPVADLIGQ 119
>UniRef50_Q5LQD7 Cluster: Peptide/opine/nickel uptake family ABC
transporter, permease protein; n=13; Proteobacteria|Rep:
Peptide/opine/nickel uptake family ABC transporter,
permease protein - Silicibacter pomeroyi
Length = 315
Score = 37.1 bits (82), Expect = 0.41
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGEL--TLPPEVMANIEAKYHLNDP 567
M +I++R + AIP L + I F +M L PG P T L PE + + L+ P
Sbjct: 1 MGSYIIKRLISAIPVLLGITIIVFLIMSLIPGDPATAILGSYATPENVEKLNRDLGLDKP 60
Query: 568 IMTQY 582
++ +Y
Sbjct: 61 MVQRY 65
>UniRef50_Q0ARC9 Cluster: Extracellular solute-binding protein,
family 5 precursor; n=1; Maricaulis maris MCS10|Rep:
Extracellular solute-binding protein, family 5 precursor
- Maricaulis maris (strain MCS10)
Length = 544
Score = 37.1 bits (82), Expect = 0.41
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLSNS-SMNTAHYKSPAFDSIMAE 112
W ADYN+P +FL S MN A Y +P FDS++ E
Sbjct: 435 WIADYNDPYNFLFLGEYRSVPMNYARYNNPEFDSLVTE 472
Score = 35.1 bits (77), Expect = 1.7
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 139 RTALYTKAEQQLDKDSAIVPVYYYVNARLVKPWVGGYTGKI 261
R + +AEQ L D I+P+ +YVN LV P V G+ +
Sbjct: 482 RGQMLAEAEQMLIDDMPIIPLVFYVNKSLVNPRVTGWVDNL 522
>UniRef50_A6X7U7 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=1;
Ochrobactrum anthropi ATCC 49188|Rep:
Binding-protein-dependent transport systems inner
membrane component precursor - Ochrobactrum anthropi
(strain ATCC 49188 / DSM 6882 / NCTC 12168)
Length = 311
Score = 37.1 bits (82), Expect = 0.41
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGEL--TLPPEVMANIEAKYHLNDP 567
M+ IL+R L IP L + ISF ++++ PG P + + PE + + + L+ P
Sbjct: 1 MIFSILKRLLMLIPVLLGITLISFLLLQIVPGDPASHAMGTRASPEELQAMRELWGLDKP 60
Query: 568 IMTQY 582
+ QY
Sbjct: 61 LWVQY 65
>UniRef50_A6WCC2 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=2;
Actinomycetales|Rep: Binding-protein-dependent transport
systems inner membrane component precursor - Kineococcus
radiotolerans SRS30216
Length = 334
Score = 37.1 bits (82), Expect = 0.41
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSP---FTGELTLPPEVMANIEAKYHLND 564
ML F++RR + LF L + F +R PG P GE P + A++ A+Y +
Sbjct: 1 MLTFVVRRLGLLVVVLFGLSLLLFAWIRALPGDPARALLGEKATPAGI-ASVNARYGFDQ 59
Query: 565 PIMTQY 582
P+ QY
Sbjct: 60 PVWQQY 65
>UniRef50_A6TTE0 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=1;
Alkaliphilus metalliredigens QYMF|Rep:
Binding-protein-dependent transport systems inner
membrane component precursor - Alkaliphilus
metalliredigens QYMF
Length = 323
Score = 37.1 bits (82), Expect = 0.41
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPG--SPFTGELTLPPEVMANIEAKYHLNDP 567
MLK+I RR + ++ T+ FF+ R PG + + + ++PPE +Y ND
Sbjct: 1 MLKYIARRVGIMTVMILLIATMIFFLFRAMPGDATAYIVDPSMPPEAREIARERYGFNDS 60
Query: 568 IMTQY 582
QY
Sbjct: 61 KWVQY 65
>UniRef50_A6PPR1 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=1;
Victivallis vadensis ATCC BAA-548|Rep:
Binding-protein-dependent transport systems inner
membrane component precursor - Victivallis vadensis ATCC
BAA-548
Length = 338
Score = 37.1 bits (82), Expect = 0.41
Identities = 14/34 (41%), Positives = 26/34 (76%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSP 495
M+++++RR L A TL +++ +S+ ++RLAPG P
Sbjct: 1 MVQYLIRRLLLAAFTLLMILLVSYVLLRLAPGDP 34
>UniRef50_A6NWH3 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 317
Score = 37.1 bits (82), Expect = 0.41
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +1
Query: 400 KFILRRCLEAIPTLFILITISFFMMRLAPGSPFT-----GELTLPPEVMANIEAKYHLND 564
++++RR + + TLF++ +SF +MRL+P P T + E + L+
Sbjct: 7 RYLIRRVIVVLLTLFVVTLLSFLLMRLSPVDPATAYVKRNSAVVTQEQIDEARVMLGLDK 66
Query: 565 PIMTQYF 585
P+ QYF
Sbjct: 67 PLPVQYF 73
>UniRef50_Q89FI7 Cluster: Bll6713 protein; n=5;
Alphaproteobacteria|Rep: Bll6713 protein -
Bradyrhizobium japonicum
Length = 316
Score = 36.7 bits (81), Expect = 0.54
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSP---FTGELTLPPEVMANIEAKYHLND 564
M ++++ R +AI L I+ I F ++ LAPG P F + E + + + L+
Sbjct: 1 MARYVVNRLAQAIMLLVIVSAIGFALLHLAPGGPLSQFAASAQMTQEDLDRVTRQLGLDR 60
Query: 565 PIMTQYF----QLPENNWAHG*FSGPSXLNI 645
P+ QY ++ + +W G + L++
Sbjct: 61 PLPIQYLDWFGRMLKGDWGKSYRDGEAVLSV 91
>UniRef50_Q6MJQ9 Cluster: Oligopeptide ABC transporter, permease
protein precursor; n=1; Bdellovibrio bacteriovorus|Rep:
Oligopeptide ABC transporter, permease protein precursor
- Bdellovibrio bacteriovorus
Length = 310
Score = 36.7 bits (81), Expect = 0.54
Identities = 15/60 (25%), Positives = 31/60 (51%)
Frame = +1
Query: 400 KFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPPEVMANIEAKYHLNDPIMTQ 579
+F+ ++ +E +L +L ++F +++ PG PF E L P V + + L + +Q
Sbjct: 7 RFVFKKTVEMTASLGVLAALTFVLLKALPGGPFDEETALNPVVREKLAQHWGLEQSLPSQ 66
>UniRef50_Q6DB27 Cluster: ABC transporter permease protein; n=13;
Bacteria|Rep: ABC transporter permease protein - Erwinia
carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 314
Score = 36.7 bits (81), Expect = 0.54
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPF-----TGELTLPPEVMANIEAKYHL 558
M +++ R +A+ L+ T+SF +++ PG EL L E +A + Y
Sbjct: 1 MNRYLALRIGQALLVLWAAFTLSFILLQAMPGDAVLIKFQNPELGLSAEQIAQLRLSYGA 60
Query: 559 NDPIMTQYF 585
+ P++TQYF
Sbjct: 61 DKPVLTQYF 69
>UniRef50_A7BVC4 Cluster: Oligopeptide ABC transporter periplasmic
oligopeptide-binding protein; n=2; Beggiatoa sp. PS|Rep:
Oligopeptide ABC transporter periplasmic
oligopeptide-binding protein - Beggiatoa sp. PS
Length = 215
Score = 36.7 bits (81), Expect = 0.54
Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +1
Query: 139 RTALYTKAEQQLDK-DSAIVPVYYYVNARLVKPWV 240
R LY +AEQ L++ ++AIVP+Y+ LVKPWV
Sbjct: 160 RKQLYRRAEQILNETEAAIVPIYFASAEFLVKPWV 194
>UniRef50_A3EQ60 Cluster: Putative oligopeptide ABC transporter;
n=1; Leptospirillum sp. Group II UBA|Rep: Putative
oligopeptide ABC transporter - Leptospirillum sp. Group
II UBA
Length = 324
Score = 36.7 bits (81), Expect = 0.54
Identities = 20/68 (29%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPPEV----MANIEAKYHLN 561
M++ IL R + + L ++ +SF ++ LAPG+ F ++ + P+V + ++A Y L+
Sbjct: 1 MIRMILIRFVHFLVVLSGILFLSFLLIHLAPGN-FLSQMAMNPQVSPAIIRQLKALYGLD 59
Query: 562 DPIMTQYF 585
P Q+F
Sbjct: 60 KPFYVQFF 67
>UniRef50_Q985N6 Cluster: ABC transporter, peptide-binding protein;
n=1; Mesorhizobium loti|Rep: ABC transporter,
peptide-binding protein - Rhizobium loti (Mesorhizobium
loti)
Length = 530
Score = 36.3 bits (80), Expect = 0.72
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIM 106
W ADY +P +FL S N ++Y SPA+++ M
Sbjct: 431 WIADYKDPETFLGISRKASGNNYSNYNSPAYEAAM 465
>UniRef50_Q8G560 Cluster: Similar to ABC transporter permease
protein for peptides; n=4; Bifidobacterium|Rep: Similar
to ABC transporter permease protein for peptides -
Bifidobacterium longum
Length = 325
Score = 36.3 bits (80), Expect = 0.72
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +1
Query: 397 LKFILRRCLEAIPTLFILITISFFMMRLAPG--SPFTGELTLPPEVMANIEAKYHLNDPI 570
++F+L+R + LF L + F +R+ PG + + PPE + + + L+ P+
Sbjct: 1 MRFVLKRLALFVVALFGLSVVVFAALRILPGDVASVMAGVNSPPERVTQLREQLGLDRPL 60
Query: 571 MTQYF 585
+ QYF
Sbjct: 61 IAQYF 65
>UniRef50_Q839T9 Cluster: Pheromone binding protein, putative; n=5;
Enterococcus|Rep: Pheromone binding protein, putative -
Enterococcus faecalis (Streptococcus faecalis)
Length = 559
Score = 36.3 bits (80), Expect = 0.72
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIM 106
W ADY +P+SFL+ ++ ++ N + S A+D ++
Sbjct: 455 WAADYADPSSFLDLFVTGNNYNRGRFSSKAYDELI 489
>UniRef50_Q3W1D2 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=2;
Frankia|Rep: Binding-protein-dependent transport systems
inner membrane component precursor - Frankia sp. EAN1pec
Length = 385
Score = 36.3 bits (80), Expect = 0.72
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +1
Query: 397 LKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGEL----TLPPEVMANIEAKYHLND 564
++ + R L A+ ++ +T +F +++L PG P + + PE A + A+Y L+D
Sbjct: 74 IRLVAVRLLGAVLVIWGAVTAAFVVLQLIPGDPINAIIGTHALVGPEQRAQLRAEYGLDD 133
Query: 565 PIMTQY 582
+ QY
Sbjct: 134 SLFAQY 139
>UniRef50_Q213C0 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=2; Rhodopseudomonas
palustris|Rep: Binding-protein-dependent transport
systems inner membrane component - Rhodopseudomonas
palustris (strain BisB18)
Length = 322
Score = 36.3 bits (80), Expect = 0.72
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPF---TGELTL-PPEVMANIEAKYHLN 561
M + I+RR L+ IP + +I ++F ++ +APGS F T E + P ++ + Y ++
Sbjct: 1 MRRIIIRRLLQIIPLILGVIVLNFMLIHMAPGSLFDVMTSEQQVTDPAMLDQLRHTYGVD 60
Query: 562 DPIMTQ 579
P Q
Sbjct: 61 QPTSVQ 66
>UniRef50_Q1ATC7 Cluster: Twin-arginine translocation pathway
signal; n=1; Rubrobacter xylanophilus DSM 9941|Rep:
Twin-arginine translocation pathway signal - Rubrobacter
xylanophilus (strain DSM 9941 / NBRC 16129)
Length = 565
Score = 36.3 bits (80), Expect = 0.72
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLSNSS------MNTAHYKSPAFDSIMAETLKVTDE 133
W D +P +FLN +LS+ + N A+YK+P D I+ DE
Sbjct: 460 WTGDNGDPDNFLNVLLSSKTATKTDAQNVAYYKNPELDRILERAASTIDE 509
>UniRef50_A1R300 Cluster: Putative ABC-type dipeptide/oligopeptide
transport systems, permease components; n=3;
Actinobacteria (class)|Rep: Putative ABC-type
dipeptide/oligopeptide transport systems, permease
components - Arthrobacter aurescens (strain TC1)
Length = 342
Score = 36.3 bits (80), Expect = 0.72
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Frame = +1
Query: 376 RPEGRAMLK--FILRRCLEAIPTLFILITISFFMMRLAPGSPFTGEL---TLPPEVMANI 540
R +GRA+ FI ++ L + TLF+ FF L PG P L + PE + I
Sbjct: 20 RAKGRAVRPAVFIAKKVLALVATLFVASLAVFFSRFLVPGDPARFLLRGRSPKPEALEEI 79
Query: 541 EAKYHLNDPIMTQYFQLPENNWAHG*FSG 627
++ L+ P QY NW G G
Sbjct: 80 TRQFGLDKPAWEQYL-----NWLGGILQG 103
>UniRef50_Q8TTX4 Cluster: Oligopeptide ABC transporter, permease
protein; n=3; Methanosarcina|Rep: Oligopeptide ABC
transporter, permease protein - Methanosarcina
acetivorans
Length = 313
Score = 36.3 bits (80), Expect = 0.72
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Frame = +1
Query: 397 LKFILRRCLEAIPTLFILITISFFMMRLAPGS--------PFTG-ELTLPPEVMANIEAK 549
+K+ L+R TLF ++FF+M + PG F G E ++ E + I ++
Sbjct: 1 MKYFLKRAAFMALTLFAACALTFFLMNVIPGGTAELIIKHTFVGLEESVTEEQINQISSR 60
Query: 550 YHLNDPIMTQYFQ 588
Y+L+DP+ Q+ +
Sbjct: 61 YNLDDPLYLQFLR 73
>UniRef50_Q8REI9 Cluster: Dipeptide transport system permease
protein dppB; n=2; Fusobacterium nucleatum|Rep:
Dipeptide transport system permease protein dppB -
Fusobacterium nucleatum subsp. nucleatum
Length = 312
Score = 35.9 bits (79), Expect = 0.95
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELTLPPEV--MANIEAKYH---L 558
M+K+I++R IP L + ++F M+ LAP P + + T V IE K L
Sbjct: 1 MIKYIIKRIFYLIPILVGVTFLTFLMLYLAPSDPISMKYTSMATVGDSKYIEEKKEEMGL 60
Query: 559 NDPIMTQYFQLPEN 600
ND + QY + +N
Sbjct: 61 NDSFLKQYVRWSKN 74
>UniRef50_Q8RD25 Cluster: ABC-type dipeptide/oligopeptide/nickel
transport systems, permease components; n=1;
Thermoanaerobacter tengcongensis|Rep: ABC-type
dipeptide/oligopeptide/nickel transport systems,
permease components - Thermoanaerobacter tengcongensis
Length = 339
Score = 35.9 bits (79), Expect = 0.95
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +1
Query: 388 RAMLKFILRRCLEAIPTLFILITISFFMMRLAPGSP 495
+ + + R L A+ T+F++ T +FF++RL PG+P
Sbjct: 4 KILTNYFFIRFLRALVTIFVVATFTFFLIRLMPGNP 39
>UniRef50_Q5WLH9 Cluster: Dipeptide/oligopeptide/nickel ABC
transporter permease; n=1; Bacillus clausii KSM-K16|Rep:
Dipeptide/oligopeptide/nickel ABC transporter permease -
Bacillus clausii (strain KSM-K16)
Length = 312
Score = 35.9 bits (79), Expect = 0.95
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Frame = +1
Query: 406 ILRRCLEAIPTLFILITISFFMMRLAPGSPF-----TGELTLPPEVMANIEAKYHLNDPI 570
I+RR LE + + IL +SF +M+LAPG ++ L E + + LN P+
Sbjct: 4 IVRRLLELMIFILILSFVSFIIMKLAPGDAIRELLSADDVALEQETIEGHREEMGLNRPL 63
Query: 571 MTQY 582
+ QY
Sbjct: 64 LEQY 67
>UniRef50_Q039X9 Cluster: ABC-type oligopeptide transport system,
periplasmic component; n=3; Lactobacillus casei ATCC
334|Rep: ABC-type oligopeptide transport system,
periplasmic component - Lactobacillus casei (strain ATCC
334)
Length = 546
Score = 35.9 bits (79), Expect = 0.95
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAET 115
W ADY +P ++L+ SNS N +++ +D +MA++
Sbjct: 446 WGADYPDPNTYLDLFTSNSEYNHGQWQNADYDKLMAKS 483
>UniRef50_A7NQN2 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=1; Roseiflexus
castenholzii DSM 13941|Rep: Binding-protein-dependent
transport systems inner membrane component - Roseiflexus
castenholzii DSM 13941
Length = 316
Score = 35.9 bits (79), Expect = 0.95
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSP----FTGELTLPPEVMANIEAKYHLN 561
M +++L+R IPTL + I F +MRL PG F G+ + I LN
Sbjct: 1 MNRYLLQRLALVIPTLAGVSLIIFALMRLLPGDVVDILFGGDTQADQRTLDQIRENLGLN 60
Query: 562 DPIMTQYFQLPENNWAHG*FSG 627
P+ QY + W G SG
Sbjct: 61 RPLAVQYLE-----WIGGFLSG 77
>UniRef50_A6Q534 Cluster: Oligopeptide ABC transporter, permease;
n=2; Epsilonproteobacteria|Rep: Oligopeptide ABC
transporter, permease - Nitratiruptor sp. (strain
SB155-2)
Length = 318
Score = 35.9 bits (79), Expect = 0.95
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFT-GEL--TLPPEVMANIEAKYHLND 564
M K ++ + + + ++ ISFF + LAP S F+ GEL + E + ++++ Y L+
Sbjct: 1 MRKLLISKLFYLVWMMLLISLISFFAIHLAPNSFFSAGELNPNITKETLEHLKSIYGLDK 60
Query: 565 PIMTQY 582
P+ QY
Sbjct: 61 PLWQQY 66
>UniRef50_A0LTX9 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=2;
Actinomycetales|Rep: Binding-protein-dependent transport
systems inner membrane component precursor -
Acidothermus cellulolyticus (strain ATCC 43068 / 11B)
Length = 327
Score = 35.9 bits (79), Expect = 0.95
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPF----TGELTLPPEVMANIEAKYHLN 561
ML + +RR L AIP L I+ T F++ G P T + P+V+AN L+
Sbjct: 1 MLAYTVRRILVAIP-LLIVSTFVVFLLVTFSGDPLAQLRTKQPPPTPQVIANYRHMLRLD 59
Query: 562 DPIMTQYFQLPENNWAHG*FSGPS 633
PI+ +Y+ HG F GPS
Sbjct: 60 QPILLRYWHW-ITGLLHGDF-GPS 81
>UniRef50_Q979C6 Cluster: TVG1271204 protein; n=3; cellular
organisms|Rep: TVG1271204 protein - Thermoplasma
volcanium
Length = 2076
Score = 35.9 bits (79), Expect = 0.95
Identities = 31/121 (25%), Positives = 55/121 (45%)
Frame = +2
Query: 14 YNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAETLKVTDEAHAQLCTLKQNNSWIRIRPL 193
Y +P SFLNT++SNSS+ KSP D++ LK +H L L N++++ +
Sbjct: 660 YFDPNSFLNTVISNSSIYGNFIKSPTSDNLYYGFLKGYLASHYSLNIL--NSAYLALEDA 717
Query: 194 FLFITT*MRVW*NRGLVAIPERSAG*YLYPEYVHCEALMAIRGAGVSCSTVSDFYRITEG 373
+ +++ + L + G + P Y+ + + +G V S + EG
Sbjct: 718 TGYNVKYVQI--DHSLFPFSGVNPGIFYAPAYLTDQVSYSYQGEIVPYSFYQIYASTDEG 775
Query: 374 T 376
T
Sbjct: 776 T 776
>UniRef50_A2SPU1 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=3; cellular
organisms|Rep: Binding-protein-dependent transport
systems inner membrane component - Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z)
Length = 333
Score = 35.9 bits (79), Expect = 0.95
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Frame = +1
Query: 397 LKFILRRCLEAIPTLFILITISFFMMRLAPGSP---FTGEL--TLPPEVMANIEAKYHLN 561
LK I + + I T+F+L I F M RLAPG P F G+ T+ E M + L+
Sbjct: 9 LKKIGKNIIIFIITMFVLSIIVFVMARLAPGDPLQAFYGDALDTMSIEEMDAARVRLGLD 68
Query: 562 DPIMTQYFQ 588
PI QY +
Sbjct: 69 GPIYYQYIK 77
>UniRef50_Q57G03 Cluster: ABC transporter, permease protein; n=124;
Proteobacteria|Rep: ABC transporter, permease protein -
Brucella abortus
Length = 365
Score = 35.5 bits (78), Expect = 1.3
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +1
Query: 403 FILRRCLEAIPTLFILITISFFMMRLAPGSP 495
+ILRR L IPTL ++ ISF +++ APG P
Sbjct: 4 YILRRLLLMIPTLLGIMAISFAVVQFAPGGP 34
>UniRef50_Q41AC0 Cluster: Extracellular solute-binding protein,
family 5 precursor; n=1; Exiguobacterium sibiricum
255-15|Rep: Extracellular solute-binding protein, family
5 precursor - Exiguobacterium sibiricum 255-15
Length = 540
Score = 35.5 bits (78), Expect = 1.3
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAETLKVTDEAHAQLCTLKQNNS 172
W DY +P S L+ S +S N YKS A+D ++ + +D A +L KQ S
Sbjct: 440 WGPDYQDPMSNLSIFESTNSQNDVKYKSSAYDKLLNAANEESDVA-KRLDLFKQAES 495
>UniRef50_A4ABG7 Cluster: Periplasmic oligopeptide-binding protein;
n=1; Congregibacter litoralis KT71|Rep: Periplasmic
oligopeptide-binding protein - Congregibacter litoralis
KT71
Length = 552
Score = 35.5 bits (78), Expect = 1.3
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +1
Query: 148 LYTKAEQQLDKDSAIVPVYYYVNARLVKPWVGGYTGKI 261
LYT+AE L +++ ++PV Y RLV+P V G G++
Sbjct: 490 LYTRAEDILLREAPLLPVTTYTEKRLVQPSVKGLHGRV 527
>UniRef50_A3ULH0 Cluster: Oligopeptide ABC transporter, periplasmic
oligopeptide-binding protein; n=3; Vibrionales|Rep:
Oligopeptide ABC transporter, periplasmic
oligopeptide-binding protein - Vibrio splendidus 12B01
Length = 545
Score = 35.5 bits (78), Expect = 1.3
Identities = 14/45 (31%), Positives = 31/45 (68%)
Frame = +1
Query: 115 AESD*RGARTALYTKAEQQLDKDSAIVPVYYYVNARLVKPWVGGY 249
++++ + R LY +AE L++ +A++P+Y+Y + RLV+ + G+
Sbjct: 482 SKTEDQSKRFTLYQQAESLLNESAAVMPLYHYNHTRLVRNTLKGF 526
>UniRef50_A3PFV5 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=8;
Alphaproteobacteria|Rep: Binding-protein-dependent
transport systems inner membrane component - Rhodobacter
sphaeroides (strain ATCC 17029 / ATH 2.4.9)
Length = 326
Score = 35.5 bits (78), Expect = 1.3
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSP---FTGELTLPPEVMANIEAKYHLND 564
+L+F+ RR + +F++ + F ++R+ PG P G + P ++ I A+ L D
Sbjct: 3 ILRFLARRLGQGAIIIFLVSALIFTLLRVVPGDPVRLMVGGMA-PDTLVEEIAAEMGLRD 61
Query: 565 PIMTQY 582
PI Q+
Sbjct: 62 PIYVQF 67
>UniRef50_Q0V1W3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 514
Score = 35.5 bits (78), Expect = 1.3
Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Frame = -1
Query: 282 GYRYYPADLSGIATNP--RFHQTRIHVVINRNNGRILIQLL 166
GY+Y P LS + TNP RF + +I+VV+NR++ LI+ +
Sbjct: 208 GYQYLPMLLSILVTNPNFRFDKQKINVVVNRSSLEQLIKFI 248
>UniRef50_Q9HLG5 Cluster: Dipeptide transport system permease
protein (DPPB) related protein; n=5; Archaea|Rep:
Dipeptide transport system permease protein (DPPB)
related protein - Thermoplasma acidophilum
Length = 343
Score = 35.5 bits (78), Expect = 1.3
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Frame = +1
Query: 397 LKFILRRCLEAIPTLFILITISFFMMRLAPGSP------FTGELTLPPEVMANIEAKYHL 558
L FI+RR + AI TL ILI F ++ + +P + G + IE KY L
Sbjct: 6 LAFIIRRAIYAIFTLLILIVFIFTLIHIIAPNPLALARLYAGNPHASQSELIGIEKKYGL 65
Query: 559 NDPIMTQ 579
N PI Q
Sbjct: 66 NLPIYDQ 72
>UniRef50_Q5V091 Cluster: Dipeptide ABC transporter permease; n=5;
cellular organisms|Rep: Dipeptide ABC transporter
permease - Haloarcula marismortui (Halobacterium
marismortui)
Length = 360
Score = 35.5 bits (78), Expect = 1.3
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +1
Query: 400 KFILRRCLEAIPTLFILITISFFMMRLAPGSP--FTGELTLPPEVMANIEAKYHLNDPIM 573
+F+++R L IP LF + ++ F ++ LAPG P E + I + L P+
Sbjct: 18 RFVIKRLLLLIPVLFGVASVVFAILHLAPGDPAIIIAGQRASAEQLEQIRVELGLRRPLW 77
Query: 574 TQY 582
QY
Sbjct: 78 EQY 80
>UniRef50_Q6D2Y2 Cluster: ABC transporter permease protein; n=2;
Bacteria|Rep: ABC transporter permease protein - Erwinia
carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 318
Score = 35.1 bits (77), Expect = 1.7
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +1
Query: 403 FILRRCLEAIPTLFILITISFFMMRLAPGSP---FTGELTLPPEVMANIEAKYHLNDPIM 573
FI R L IP L ++ + F ++ LAPG P G P +V A + + L+ P++
Sbjct: 4 FIFHRLLALIPVLLVVSIVVFCLVHLAPGDPVLVILGNDASPGDVAA-LRQQMGLDKPLL 62
Query: 574 TQY 582
Q+
Sbjct: 63 AQF 65
>UniRef50_Q2RWU9 Cluster: Extracellular solute-binding protein,
family 5; n=2; Proteobacteria|Rep: Extracellular
solute-binding protein, family 5 - Rhodospirillum rubrum
(strain ATCC 11170 / NCIB 8255)
Length = 545
Score = 35.1 bits (77), Expect = 1.7
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLSNSS-MNTAHYKSPAFDSIMAETLKVTDEA 136
W ADYN+P SFL M + +N + Y +P ++++M E D A
Sbjct: 446 WIADYNDPQSFLFKMEGKTGPLNYSGYDNPEYNALMDEGALTIDLA 491
Score = 33.9 bits (74), Expect = 3.8
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 139 RTALYTKAEQQLDKDSAIVPVYYYVNARLVKPWVGGY 249
R + KAE +D ++P+YYYV+ +LV P + G+
Sbjct: 493 RAEILKKAEALAMRDVPVMPIYYYVSKQLVSPKLVGW 529
>UniRef50_Q52188 Cluster: TraC precursor; n=9; root|Rep: TraC
precursor - Enterococcus faecalis (Streptococcus
faecalis)
Length = 545
Score = 35.1 bits (77), Expect = 1.7
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAET 115
W ADY +P SFL +NS +N Y + +D ++ +T
Sbjct: 450 WQADYADPISFLANFETNSPLNHGGYSNKNYDELIKDT 487
>UniRef50_A6SUK8 Cluster: ABC-type transport systems, permease
component; n=1; Janthinobacterium sp. Marseille|Rep:
ABC-type transport systems, permease component -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 310
Score = 35.1 bits (77), Expect = 1.7
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Frame = +1
Query: 397 LKFILRRCLEAIPTLFILITISFFMMRLAPGSPFT----GELTLPP-EVMANIEAKYHLN 561
LK IL R L + L+ T++F + + G G +P EV+A + +Y L+
Sbjct: 4 LKRILWRLLAGLGVLWGAATLTFIAINITAGDTALAIVGGPDAMPTAEVLAQVRKEYGLD 63
Query: 562 DPIMTQY 582
DP++TQY
Sbjct: 64 DPLLTQY 70
>UniRef50_A6CW01 Cluster: Putative permease component of ABC
transporter; n=1; Vibrio shilonii AK1|Rep: Putative
permease component of ABC transporter - Vibrio shilonii
AK1
Length = 329
Score = 35.1 bits (77), Expect = 1.7
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 10/72 (13%)
Frame = +1
Query: 397 LKFILRRCLEAIPTLFILITISFFMMRLAPGSP---FTGELT-----LPPEVMANIEA-- 546
++++L R + +TI+FF+ RL PG P F G L + PE +A++EA
Sbjct: 1 MRYLLSRFGFYLLAFVAAVTINFFLPRLMPGDPIQSFLGRLAQNGGQITPETIASLEALY 60
Query: 547 KYHLNDPIMTQY 582
Y N P+ Q+
Sbjct: 61 GYSTNTPLFQQF 72
>UniRef50_A5I1J0 Cluster: ABC transporter, permease protein; n=4;
Clostridium botulinum|Rep: ABC transporter, permease
protein - Clostridium botulinum A str. ATCC 3502
Length = 318
Score = 35.1 bits (77), Expect = 1.7
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Frame = +1
Query: 400 KFILRRCLEAIPTLFILITISFFMMRLAPGSP----FTGEL-TLPPEVMANIEAKYHLND 564
++IL+R + I +F L ISF ++ APG P + G+ L A I Y L+
Sbjct: 4 RYILKRLGQGILIIFFLSIISFLIINAAPGDPAVAIYGGKADRLTNSERARIVKNYGLDR 63
Query: 565 PIMTQYFQ 588
P+M +Y +
Sbjct: 64 PVMDRYIK 71
>UniRef50_A3Y4Z9 Cluster: Oligopeptide ABC transporter, permease
protein; n=1; Marinomonas sp. MED121|Rep: Oligopeptide
ABC transporter, permease protein - Marinomonas sp.
MED121
Length = 313
Score = 35.1 bits (77), Expect = 1.7
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +1
Query: 400 KFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELT--LPPEVMANIEAKYHLNDPIM 573
++I ++ AI TL +++T F ++R+ G P L PE++ + + LN PI
Sbjct: 4 RYIFQKITRAILTLILVVTFIFIILRVT-GDPVVTMLPDDTDPEIIEQMRIAWGLNKPIW 62
Query: 574 TQY 582
QY
Sbjct: 63 EQY 65
>UniRef50_A3I5Z0 Cluster: Oligopeptide ABC transporter, permease
protein; n=1; Bacillus sp. B14905|Rep: Oligopeptide ABC
transporter, permease protein - Bacillus sp. B14905
Length = 322
Score = 35.1 bits (77), Expect = 1.7
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Frame = +1
Query: 400 KFILRRCLEAIPTLFILITISFFMMRLAPGSP----FTGEL-TLPPEVMANIEAKYHLND 564
K++ +R + L I+ +SFFMM APG+P + G TL IE + L+
Sbjct: 4 KWLGKRVIMGTIVLIIVSFLSFFMMHAAPGNPAAAYYGGNAQTLTTAEKERIEQAFGLDQ 63
Query: 565 PIMTQY 582
P+ QY
Sbjct: 64 PVFLQY 69
>UniRef50_A0KDN1 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=4; Burkholderia
cenocepacia|Rep: Binding-protein-dependent transport
systems inner membrane component - Burkholderia
cenocepacia (strain HI2424)
Length = 336
Score = 35.1 bits (77), Expect = 1.7
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = +1
Query: 439 LFILITISFFMMRLAPG---SPFTGELTLPPEVMANIEAKYHLNDPIMTQY 582
L+ +T+SF + LAPG S GE PE+ A I ++ L++P+ QY
Sbjct: 43 LWAAVTLSFAAVHLAPGDIVSILIGEQLSTPEIEAAIRQEWGLDEPLALQY 93
>UniRef50_A0EA61 Cluster: Chromosome undetermined scaffold_85, whole
genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_85, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 2793
Score = 35.1 bits (77), Expect = 1.7
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = -1
Query: 339 EQDTPAPRIAISASQCTYSGYRYYPADLSGIATNPRFHQTRIHVVINRNNGRILIQL 169
+Q R I SQ Y+ YYP + +ATNP F Q ++V +NN I L
Sbjct: 2097 QQIVQIERSTIRISQTEYNIKLYYPENFGYMATNPFFTQDGQYIVYQQNNNVIFQSL 2153
>UniRef50_UPI000045D6B0 Cluster: COG4166: ABC-type oligopeptide
transport system, periplasmic component; n=1;
Haemophilus somnus 2336|Rep: COG4166: ABC-type
oligopeptide transport system, periplasmic component -
Haemophilus somnus 2336
Length = 483
Score = 34.7 bits (76), Expect = 2.2
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLSNSSMNTAHYKS 85
W ADYNE ++FL LSNSS N K+
Sbjct: 451 WSADYNEASTFLTYFLSNSSQNKIGLKA 478
>UniRef50_Q88YI1 Cluster: Lipoprotein, peptide binding protein OppA
homolog; n=5; Lactobacillaceae|Rep: Lipoprotein, peptide
binding protein OppA homolog - Lactobacillus plantarum
Length = 550
Score = 34.7 bits (76), Expect = 2.2
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIM 106
W AD+N+P S L M +NS N Y S +++++
Sbjct: 448 WGADFNDPISHLQIMTNNSGYNYGKYNSSTYNALV 482
>UniRef50_Q7NQ13 Cluster: Probable oligopeptide ABC transporter
system, substrate-binding protein; n=2; Chromobacterium
violaceum|Rep: Probable oligopeptide ABC transporter
system, substrate-binding protein - Chromobacterium
violaceum
Length = 537
Score = 34.7 bits (76), Expect = 2.2
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +1
Query: 109 GNAESD*RGARTALYTKAEQQLDKDSAIVPVYYYVNARLVKPWVGG 246
GN +D G R L+T+A + + D ++P+ Y RL+K +VGG
Sbjct: 474 GNQATD-AGKRKQLFTQAVKMIMDDYPMLPLLQYTAPRLIKSYVGG 518
>UniRef50_Q2J9B6 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=1; Frankia
sp. CcI3|Rep: Binding-protein-dependent transport
systems inner membrane component precursor - Frankia sp.
(strain CcI3)
Length = 330
Score = 34.7 bits (76), Expect = 2.2
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Frame = +1
Query: 388 RAMLKFILRRCLEAIPTLFILITISFFMMRLAPGSP----FTGELTLPPEVMANIEAKYH 555
RA+ +F+LRR + L+ T++F + + PG P + P++ I Y
Sbjct: 2 RAVARFLLRRLVVGAGVLWGAATLAFVTLHVVPGDPVDTLIGPTFGISPQLREQINETYG 61
Query: 556 LNDPIMTQY 582
P++ QY
Sbjct: 62 FQSPLVVQY 70
>UniRef50_Q9F1J4 Cluster: TraC protein; n=1; Enterococcus
faecalis|Rep: TraC protein - Enterococcus faecalis
(Streptococcus faecalis)
Length = 529
Score = 34.7 bits (76), Expect = 2.2
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +2
Query: 8 ADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAETLKVTDE 133
ADY +P S L+ NS N +Y S ++ + ++LK TD+
Sbjct: 432 ADYPDPFSILSNFRKNSPNNHGNYSSDKYEDFLNKSLKETDK 473
>UniRef50_Q11EZ9 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=1; Mesorhizobium sp.
BNC1|Rep: Binding-protein-dependent transport systems
inner membrane component - Mesorhizobium sp. (strain
BNC1)
Length = 306
Score = 34.7 bits (76), Expect = 2.2
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSP 495
ML +L+ ++ +LF+L T FFM+R+ PG P
Sbjct: 1 MLTQVLKTLAHSVISLFLLFTFVFFMIRIMPGDP 34
>UniRef50_A7JPR1 Cluster: Oligopeptide ABC superfamily ATP binding
cassette transporter, binding protein; n=3;
Pasteurellaceae|Rep: Oligopeptide ABC superfamily ATP
binding cassette transporter, binding protein -
Mannheimia haemolytica PHL213
Length = 515
Score = 34.7 bits (76), Expect = 2.2
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIM--AETLKVTDEAHAQLC--TLKQNN 169
WCADY +P FL S S N + YKS D + +T ++ EA L +Q
Sbjct: 408 WCADYPDPIVFLQKFHSMSPDNHSGYKSEIVDQKLNRLQTETLSAEARESLIQEISEQLY 467
Query: 170 SWIRIRPLFLF 202
S + + PLF +
Sbjct: 468 SDVAVLPLFQY 478
>UniRef50_Q9WXN7 Cluster: Oligopeptide ABC transporter, permease
protein; n=2; Thermotoga|Rep: Oligopeptide ABC
transporter, permease protein - Thermotoga maritima
Length = 338
Score = 34.3 bits (75), Expect = 2.9
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 388 RAMLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELT-LPPEVMANIEA 546
++M K++LRR + + T + TI F + R PG+P + L+ L AN EA
Sbjct: 4 KSMFKYLLRRFIFLLVTYIVATTIVFILPRAIPGNPLSQILSGLSRVAQANPEA 57
>UniRef50_Q6MF23 Cluster: Putative dipeptide transport system
permease protein, dppB; n=1; Candidatus Protochlamydia
amoebophila UWE25|Rep: Putative dipeptide transport
system permease protein, dppB - Protochlamydia
amoebophila (strain UWE25)
Length = 498
Score = 34.3 bits (75), Expect = 2.9
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSP 495
M ++LRR L TLF ++ I+F ++ LAPG P
Sbjct: 1 MWNYVLRRFLLLPLTLFFIVLINFIIINLAPGDP 34
>UniRef50_Q6M2I9 Cluster: ABC-type dipeptide/oligopeptide/nickel
transport system, permease component; n=14;
Bacteria|Rep: ABC-type dipeptide/oligopeptide/nickel
transport system, permease component - Corynebacterium
glutamicum (Brevibacterium flavum)
Length = 321
Score = 34.3 bits (75), Expect = 2.9
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITIS-FFMMRLAPGSPFT---GELTLPPEVMANIEAKYHLN 561
+L+ + RR + A+P + I +T+ F +M +P P GE P + A EA LN
Sbjct: 4 LLRLVGRRLI-ALPIMIIGVTLLVFIVMSFSPADPARLALGESASPEALEAYREAN-GLN 61
Query: 562 DPIMTQYF 585
DP+M +YF
Sbjct: 62 DPMMVRYF 69
>UniRef50_Q2FZQ9 Cluster: Oligopeptide ABC transporter, permease
protein, putative; n=10; Staphylococcus aureus subsp.
aureus|Rep: Oligopeptide ABC transporter, permease
protein, putative - Staphylococcus aureus (strain NCTC
8325)
Length = 320
Score = 34.3 bits (75), Expect = 2.9
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTG--ELTLPPEVMANIEAKYHLNDP 567
M+K IL+R IP L ++ + F + + PG PF+ + E + K LND
Sbjct: 1 MIKLILKRLGLMIPLLILISIVVFSLAIIQPGDPFSDLQNGKIKQEAINAQREKLGLNDS 60
Query: 568 IMTQYFQLPENNWAHG 615
I QY + N+ HG
Sbjct: 61 IPHQYIRW-VNHVIHG 75
>UniRef50_A7DFI1 Cluster: Putative uncharacterized protein; n=5;
Methylobacterium extorquens PA1|Rep: Putative
uncharacterized protein - Methylobacterium extorquens
PA1
Length = 155
Score = 34.3 bits (75), Expect = 2.9
Identities = 21/48 (43%), Positives = 24/48 (50%)
Frame = +1
Query: 466 FMMRLAPGSPFTGELTLPPEVMANIEAKYHLNDPIMTQYFQLPENNWA 609
F +LA F GEL L P+ M EA HL I+T LP NWA
Sbjct: 39 FWSKLASLDDFFGELPLLPDAMELYEAVRHLKPIILT---GLPRGNWA 83
>UniRef50_A6VND4 Cluster: 4-phytase precursor; n=1; Actinobacillus
succinogenes 130Z|Rep: 4-phytase precursor -
Actinobacillus succinogenes 130Z
Length = 539
Score = 34.3 bits (75), Expect = 2.9
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAETLKVTDEA 136
WCADYN+P++F N + N + + + ++L V EA
Sbjct: 433 WCADYNDPSAFFNLLHGQHPDNKTGIDNAEINQWLEQSLTVKTEA 477
>UniRef50_A4XIB1 Cluster: Extracellular solute-binding protein,
family 5 precursor; n=1; Caldicellulosiruptor
saccharolyticus DSM 8903|Rep: Extracellular
solute-binding protein, family 5 precursor -
Caldicellulosiruptor saccharolyticus (strain ATCC 43494
/ DSM 8903)
Length = 534
Score = 34.3 bits (75), Expect = 2.9
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +1
Query: 130 RGARTALYTKAEQQLDKDSAIVPVYYYVNARLVKPWVGGY 249
R R +AE+ L +D A++P+Y+YV +L++ +V Y
Sbjct: 478 RKQRMKYMMEAEKILMEDYAVIPIYFYVKGQLLRDYVKNY 517
>UniRef50_A3TIW1 Cluster: ABC transporter permease protein; n=1;
Janibacter sp. HTCC2649|Rep: ABC transporter permease
protein - Janibacter sp. HTCC2649
Length = 325
Score = 34.3 bits (75), Expect = 2.9
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Frame = +1
Query: 415 RCLEAIPTLFILITISFFMMRLAPGSPFTGEL-----TLPPEVMANIEAKYHLNDPIMTQ 579
R L TL + + F M+R PG T L L P A++ Y ++ P++TQ
Sbjct: 15 RVLAVAATLLGVALLVFIMLRAIPGDQITASLGTEAAALTPAQQASLREYYGIDQPLVTQ 74
Query: 580 YF 585
+F
Sbjct: 75 FF 76
>UniRef50_A3CL90 Cluster: Nickel ABC transporter, putative; n=1;
Streptococcus sanguinis SK36|Rep: Nickel ABC
transporter, putative - Streptococcus sanguinis (strain
SK36)
Length = 331
Score = 34.3 bits (75), Expect = 2.9
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGELT---LP--PEVMANIEAKYHL 558
M+KFI++ L+ + L + ISF ++ LAPG P L +P E++ A+ L
Sbjct: 1 MIKFIIKTILQFVLILLCVSFISFLLVYLAPGDPAESILNAQGIPFTKELLEIKRAEMGL 60
Query: 559 NDPIMTQY 582
N M QY
Sbjct: 61 NGSFMEQY 68
>UniRef50_Q8YVF5 Cluster: All2023 protein; n=1; Nostoc sp. PCC
7120|Rep: All2023 protein - Anabaena sp. (strain PCC
7120)
Length = 676
Score = 33.9 bits (74), Expect = 3.8
Identities = 18/74 (24%), Positives = 34/74 (45%)
Frame = +1
Query: 472 MRLAPGSPFTGELTLPPEVMANIEAKYHLNDPIMTQYFQLPENNWAHG*FSGPSXLNIKD 651
+ L+P P+ L PE+++ + + + ++T+Y EN P N+K
Sbjct: 468 LNLSPLRPYKYVYPLAPEILSELAYFFEDQNNLVTRY-ATEENEQTSEKTERPGLENLKL 526
Query: 652 LFGQWTLVWQSQFF 693
QW +WQS ++
Sbjct: 527 WVNQWNRLWQSLYY 540
>UniRef50_Q890D5 Cluster: Extracellular protein, peptide binding
protein OppA homolog; n=2; Lactobacillus|Rep:
Extracellular protein, peptide binding protein OppA
homolog - Lactobacillus plantarum
Length = 547
Score = 33.9 bits (74), Expect = 3.8
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 2 WCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIM 106
W D+ +P+ L + +S+ N HY+S A+D M
Sbjct: 446 WSMDFADPSQSLTILTGDSNSNMGHYQSKAYDQAM 480
>UniRef50_Q1N1H0 Cluster: Extracellular solute-binding protein,
family 5; n=3; Proteobacteria|Rep: Extracellular
solute-binding protein, family 5 - Oceanobacter sp.
RED65
Length = 721
Score = 33.9 bits (74), Expect = 3.8
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 7/60 (11%)
Frame = +2
Query: 2 WCADYNEPTSFL------NTML-SNSSMNTAHYKSPAFDSIMAETLKVTDEAHAQLCTLK 160
W ADY +P +FL N + S S +N+A+YK+ A+D + + +++ D + ++ ++
Sbjct: 568 WLADYPDPENFLFLLYGDNAQIDSKSGVNSANYKNAAYDKLF-DKMRIMDNSPERMAVIQ 626
>UniRef50_Q11DM1 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=2;
Alphaproteobacteria|Rep: Binding-protein-dependent
transport systems inner membrane component -
Mesorhizobium sp. (strain BNC1)
Length = 326
Score = 33.9 bits (74), Expect = 3.8
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGEL--TLPPEVMANIEAKYHLNDP 567
M+ +++RR L IP ++ ++F ++ + PG P + L PE + + LNDP
Sbjct: 1 MIAYLIRRLLLFIPMAMGMVVVTFGLLLIIPGDPASVLLGQEASPEAIERLRDSLGLNDP 60
>UniRef50_A3IE85 Cluster: Permease protein of oligopeptide ABC
transporter; n=1; Bacillus sp. B14905|Rep: Permease
protein of oligopeptide ABC transporter - Bacillus sp.
B14905
Length = 312
Score = 33.9 bits (74), Expect = 3.8
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +1
Query: 403 FILRRCLEAIPTLFILITISFFMMRLAPGSPFTGEL--TLPPEVMANIEAKYHLNDPIMT 576
+ILRR + I T+ ++ I+F + ++ PG P L P + N+ ++ L+ P+
Sbjct: 2 YILRRIILLITTILLVSIITFGVFQILPGDPVRTMLGTEADPTQIENLRSELGLDRPLYE 61
Query: 577 QY 582
QY
Sbjct: 62 QY 63
>UniRef50_A2SM58 Cluster: IM pore protein; n=4; Proteobacteria|Rep:
IM pore protein - Methylibium petroleiphilum (strain
PM1)
Length = 312
Score = 33.9 bits (74), Expect = 3.8
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSP--FTGELTLPPEVMANIEAKYHLNDP 567
M +++RR + IPTL ++ + FF+ + G P G L E + I + LN P
Sbjct: 1 MAAYLIRRLWQMIPTLVGVVLLVFFLFKTFGGDPAEILGGLNASAEQVDAIREQLGLNKP 60
Query: 568 IMTQ 579
+ Q
Sbjct: 61 VWQQ 64
>UniRef50_A1SXD6 Cluster: ABC transporter D-Ala-D-Ala-binding inner
membrane protein precursor; n=2; Proteobacteria|Rep: ABC
transporter D-Ala-D-Ala-binding inner membrane protein
precursor - Psychromonas ingrahamii (strain 37)
Length = 341
Score = 33.9 bits (74), Expect = 3.8
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +1
Query: 406 ILRRCLEAIPTLFILITISFFMMRLAPGSP 495
IL+R L AIPTL ++ ISF + R PG P
Sbjct: 9 ILKRLLLAIPTLLGVLVISFSLTRALPGDP 38
>UniRef50_A1FX51 Cluster: Glycosyl transferase, family 2; n=1;
Stenotrophomonas maltophilia R551-3|Rep: Glycosyl
transferase, family 2 - Stenotrophomonas maltophilia
R551-3
Length = 350
Score = 33.9 bits (74), Expect = 3.8
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -1
Query: 348 DTVEQDTPAPRIAISASQCTYSGYRYYPADLSGI-ATNPRFHQTRI 214
D + PA RI ++ CTY+G RY A L I + +PR H+ I
Sbjct: 3 DAPSRSAPAERIGVAL--CTYNGARYLQAQLDSILSQDPRVHEVVI 46
>UniRef50_Q8TLI7 Cluster: Oligopeptide ABC transporter, permease
protein; n=4; Methanomicrobia|Rep: Oligopeptide ABC
transporter, permease protein - Methanosarcina
acetivorans
Length = 331
Score = 33.9 bits (74), Expect = 3.8
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Frame = +1
Query: 388 RAMLKFILRRCLEAIPTLFILITISFFMMRLAPGSP--FTGELTL-----PPEVMANIEA 546
+ M IL R L+ +P + + I+F ++ L+PG P T TL P E +A +
Sbjct: 17 KMMHTIILNRLLQMVPVMIGISLITFAVISLSPGDPAEITLRATLGTESPPKEAIARLHE 76
Query: 547 KYHLNDPIMTQYFQ 588
+ L+DP Y +
Sbjct: 77 EMGLDDPWYISYMK 90
>UniRef50_A7IAY1 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=1;
Candidatus Methanoregula boonei 6A8|Rep:
Binding-protein-dependent transport systems inner
membrane component precursor - Methanoregula boonei
(strain 6A8)
Length = 327
Score = 33.9 bits (74), Expect = 3.8
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = +1
Query: 403 FILRRCLEAIPTLFILITISFFMMRLAPGSPFTGEL-----TLPPEVMANIEAKYHLNDP 567
++LRR + + F+ +TI+FF++ L PG T L +P + ++ L+ P
Sbjct: 6 YLLRRICYSGASFFVCMTITFFLLHLMPGDYITNYLLSLSNQIPQAAVDQFRHQFGLDLP 65
Query: 568 IMTQYFQLPENNWAHG 615
+TQ + L N HG
Sbjct: 66 -LTQQYALYIVNILHG 80
>UniRef50_Q9X269 Cluster: Oligopeptide ABC transporter, permease
protein; n=2; Bacteria|Rep: Oligopeptide ABC
transporter, permease protein - Thermotoga maritima
Length = 341
Score = 33.5 bits (73), Expect = 5.1
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 13/74 (17%)
Frame = +1
Query: 397 LKFILRRCLEAIPTLFILITISFFMMRLAPGSPF--------TGELTLPPE-----VMAN 537
LKF+L+R L ++ ++I I++ +M LAPG+ F +T P + +
Sbjct: 25 LKFLLKRLLTIAISMVVVIVITYVLMWLAPGNFFELQRVRDAIARVTTPDDPAYQATLKG 84
Query: 538 IEAKYHLNDPIMTQ 579
E +Y LN+P+ Q
Sbjct: 85 FEERYGLNNPLWKQ 98
>UniRef50_Q8NN85 Cluster: ABC-type transporter, permease components;
n=5; Actinomycetales|Rep: ABC-type transporter, permease
components - Corynebacterium glutamicum (Brevibacterium
flavum)
Length = 322
Score = 33.5 bits (73), Expect = 5.1
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +1
Query: 394 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGEL--TLPPEVMANIEAKYHLNDP 567
M K I L T I I F ++R+ PG P L T PE +A ++++ + P
Sbjct: 1 MSKTIAWTVLRYTLTFVIASIIIFVLIRVIPGDPAAVALGITATPEAIAALQSQLGTDQP 60
Query: 568 IMTQYF 585
+ QYF
Sbjct: 61 LFQQYF 66
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 739,782,465
Number of Sequences: 1657284
Number of extensions: 15621654
Number of successful extensions: 38798
Number of sequences better than 10.0: 284
Number of HSP's better than 10.0 without gapping: 37448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38743
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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