Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30903
         (696 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S79862-1|AAB35397.1|  504|Homo sapiens 26 S protease subunit 5b ...    31   5.2  
D31889-1|BAA06687.1|  503|Homo sapiens KIAA0072 protein.               31   5.2  
BC014478-1|AAH14478.1|  504|Homo sapiens proteasome (prosome, ma...    31   5.2  
AL161911-7|CAI95118.1|  504|Homo sapiens proteasome (prosome, ma...    31   5.2  

>S79862-1|AAB35397.1|  504|Homo sapiens 26 S protease subunit 5b
           protein.
          Length = 504

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 13/38 (34%), Positives = 24/38 (63%)
 Frame = -1

Query: 195 NNGRILIQLLFCFSVQSCACASSVTFSVSAIMLSKAGL 82
           NN  +L Q+++C   ++ + A +   S+S I L++AGL
Sbjct: 122 NNAELLKQIVYCIGGENLSVAKAAIKSLSRISLTQAGL 159


>D31889-1|BAA06687.1|  503|Homo sapiens KIAA0072 protein.
          Length = 503

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 13/38 (34%), Positives = 24/38 (63%)
 Frame = -1

Query: 195 NNGRILIQLLFCFSVQSCACASSVTFSVSAIMLSKAGL 82
           NN  +L Q+++C   ++ + A +   S+S I L++AGL
Sbjct: 121 NNAELLKQIVYCIGGENLSVAKAAIKSLSRISLTQAGL 158


>BC014478-1|AAH14478.1|  504|Homo sapiens proteasome (prosome,
           macropain) 26S subunit, non-ATPase, 5 protein.
          Length = 504

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 13/38 (34%), Positives = 24/38 (63%)
 Frame = -1

Query: 195 NNGRILIQLLFCFSVQSCACASSVTFSVSAIMLSKAGL 82
           NN  +L Q+++C   ++ + A +   S+S I L++AGL
Sbjct: 122 NNAELLKQIVYCIGGENLSVAKAAIKSLSRISLTQAGL 159


>AL161911-7|CAI95118.1|  504|Homo sapiens proteasome (prosome,
           macropain) 26S subunit, non-ATPase, 5 protein.
          Length = 504

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 13/38 (34%), Positives = 24/38 (63%)
 Frame = -1

Query: 195 NNGRILIQLLFCFSVQSCACASSVTFSVSAIMLSKAGL 82
           NN  +L Q+++C   ++ + A +   S+S I L++AGL
Sbjct: 122 NNAELLKQIVYCIGGENLSVAKAAIKSLSRISLTQAGL 159


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,127,035
Number of Sequences: 237096
Number of extensions: 2410387
Number of successful extensions: 4905
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4905
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)