Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30902
         (658 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    26   0.31 
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     24   1.3  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    24   1.3  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    23   1.7  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    23   2.9  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   5.1  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   8.9  

>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +1

Query: 523 LFPITQNRFRSGRRFKEPHLREVESKRKQKQLTL 624
           +FP+ Q      RRF E H  E++ K   K+ ++
Sbjct: 142 MFPLMQECVDDLRRFLEDHTEEIDVKTAMKKYSV 175


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = -1

Query: 553 TGTGFE*WETARSFLVAAGVLGAITVSTPSEDN 455
           +GT F  W +   F  + G  G   V  P EDN
Sbjct: 172 SGTHF--WHSHSGFQRSDGTFGPFIVRVPEEDN 202


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 608 CFRLLSTSRKWGSLNLLPDRNRF 540
           C+  +  SR +G +   PDR++F
Sbjct: 290 CYNTVEESRIFGLVTFTPDRSKF 312


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 189 GHRWRDDGRQEIVRSKRQ 136
           GH W+ D  +E VR++ Q
Sbjct: 117 GHEWQADVSEEAVRARMQ 134


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 506 GSRSPGSDHGQH 471
           G+RSPG DH ++
Sbjct: 14  GARSPGGDHSEN 25


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 13/52 (25%), Positives = 25/52 (48%)
 Frame = +3

Query: 261 KDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYA 416
           KD ++   D++   P+   + +  G   V G+ EE+  ++  +    TRR A
Sbjct: 83  KDNYRKVTDLKKRFPKLKVLLSVGGNADVSGQDEEKNIKYRNLLETTTRRLA 134


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -2

Query: 249 GGTDVSIGHRHLL 211
           GG  VS  HRHLL
Sbjct: 325 GGALVSAKHRHLL 337


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,419
Number of Sequences: 336
Number of extensions: 3229
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)