Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30901
(641 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 25 0.53
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 25 0.70
EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-toler... 23 1.6
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 6.5
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 6.5
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 6.5
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 6.5
AJ850291-1|CAH64511.1| 533|Tribolium castaneum putative esteras... 21 6.5
AJ850289-1|CAH64509.1| 533|Tribolium castaneum putative esteras... 21 6.5
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 21 8.6
AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5 prot... 21 8.6
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 25.0 bits (52), Expect = 0.53
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +2
Query: 314 HSISEEIMEDLLRLRVVVYWTGLAWAR 394
HS ++ +++ +VV Y+T AW R
Sbjct: 1810 HSTTQSLVDPKSEFKVVCYFTNWAWYR 1836
Score = 22.6 bits (46), Expect = 2.8
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +2
Query: 302 TEEDHSISEEIMEDLLRLRVVVYWTGLAWAR 394
T E + EE+ ++V Y+T AW R
Sbjct: 1381 TSEKPPLPEELKPQSGYFKIVCYFTNWAWYR 1411
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 24.6 bits (51), Expect = 0.70
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -3
Query: 198 FLCNWFYGFKQFFTISHIISQHIR 127
F+CNW + K+ FT S + +H+R
Sbjct: 345 FVCNWLFCGKR-FTRSDELQRHLR 367
>EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-tolerant
protein.
Length = 516
Score = 23.4 bits (48), Expect = 1.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -1
Query: 641 YLTKGLPQVRILASRLRIPTVVGSQTSALAWFSAF 537
Y+T+ L RI+ RI + G T ++ SAF
Sbjct: 252 YVTRHLIDGRIIGCDQRISFIAGYMTEEVSGLSAF 286
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 6.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -1
Query: 176 DLNSFSRFHTLSLSTYGSNSLDNHQTH 96
D +RF L ++T + D HQTH
Sbjct: 629 DETQVNRFVKLLVATIDEAASDVHQTH 655
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 6.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -1
Query: 176 DLNSFSRFHTLSLSTYGSNSLDNHQTH 96
D +RF L ++T + D HQTH
Sbjct: 629 DETQVNRFVKLLVATIDEAASDVHQTH 655
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.4 bits (43), Expect = 6.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -1
Query: 176 DLNSFSRFHTLSLSTYGSNSLDNHQTH 96
D +RF L ++T + D HQTH
Sbjct: 629 DETQVNRFVKLLVATIDEAASDVHQTH 655
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.4 bits (43), Expect = 6.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -1
Query: 176 DLNSFSRFHTLSLSTYGSNSLDNHQTH 96
D +RF L ++T + D HQTH
Sbjct: 629 DETQVNRFVKLLVATIDEAASDVHQTH 655
>AJ850291-1|CAH64511.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 21.4 bits (43), Expect = 6.5
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +2
Query: 320 ISEEIMEDLLRLRVVVYWTGLAWARTKTPTSSN 418
I E ED+ R V WT A PT N
Sbjct: 451 IEEGSDEDIAVKRFVKLWTNFAKNGDPNPTEEN 483
>AJ850289-1|CAH64509.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 21.4 bits (43), Expect = 6.5
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +2
Query: 320 ISEEIMEDLLRLRVVVYWTGLAWARTKTPTSSN 418
I E ED+ R V WT A PT N
Sbjct: 451 IEEGSDEDIAVKRFVKLWTNFAKNGDPNPTEEN 483
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 583 VGIRSLEARIRTWGSPFVK 639
VG ARI +G PFV+
Sbjct: 497 VGSADHSARINVYGLPFVR 515
>AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5
protein.
Length = 533
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 401 SWSSPKPIQSSKPRP 357
S+S P+P S+ PRP
Sbjct: 396 SYSVPEPTISTTPRP 410
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,865
Number of Sequences: 336
Number of extensions: 2700
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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