Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30901
         (641 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted ...    25   2.0  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   3.6  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   8.2  

>DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted
           carbonic anhydrase protein.
          Length = 318

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -1

Query: 179 MDLNSFSRFHTLSLSTYGSNSLDNHQ 102
           + +N   RF TL    +GS  +DN++
Sbjct: 256 LSVNQMKRFRTLDTGIHGSPMVDNYR 281


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 415 AGCRGLGPRPSQSSPVNHDPEPEEI 341
           AG +G GP PSQ     H  + + +
Sbjct: 239 AGVQGAGPIPSQQKHQQHQQQQQSV 263


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
 Frame = +3

Query: 531  LVKS*EPSKGTSLRAHHSWDSQ----PRSEDSDLGKP 629
            L++S +P+ G + R  HSW S     P +    LG P
Sbjct: 1369 LLESSQPAGGGTPRGRHSWASNSVEVPNTCSDRLGTP 1405


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 619,809
Number of Sequences: 2352
Number of extensions: 11135
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)