Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30901
         (641 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83129-10|CAM84807.1|  262|Caenorhabditis elegans Hypothetical p...    28   4.9  
U40419-5|AAA81426.1|  165|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>Z83129-10|CAM84807.1|  262|Caenorhabditis elegans Hypothetical
           protein W06G6.15 protein.
          Length = 262

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 15/56 (26%), Positives = 29/56 (51%)
 Frame = -3

Query: 213 ISFDTFLCNWFYGFKQFFTISHIISQHIRLKLA*QSPNTRIYHIYNNLNE*FTTIY 46
           + +  F+  WFY +  FF    +I Q+  LKL+ Q      +H +N +++ +  I+
Sbjct: 25  MEYSPFISVWFYIYIVFF----VIEQNGSLKLSHQHAAILNHHFWNGVHQVYVCIF 76


>U40419-5|AAA81426.1|  165|Caenorhabditis elegans Hypothetical
           protein C27F2.6 protein.
          Length = 165

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 186 WFYGFKQFFTISHIISQHI 130
           WF G+  FF IS ++S HI
Sbjct: 74  WFSGYCLFFLISDVLSNHI 92


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,811,281
Number of Sequences: 27780
Number of extensions: 267693
Number of successful extensions: 750
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)