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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30900
         (708 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB6CEA Cluster: PREDICTED: similar to CG7319-PC,...   118   1e-25
UniRef50_UPI00015B45ED Cluster: PREDICTED: similar to dimethylad...   114   2e-24
UniRef50_Q1A705 Cluster: Mitochondrial dimethyladenosine transfe...   108   1e-22
UniRef50_Q9VTM5 Cluster: Mitochondrial dimethyladenosine transfe...   107   2e-22
UniRef50_Q8WVM0 Cluster: Mitochondrial dimethyladenosine transfe...   107   3e-22
UniRef50_Q2PQU7 Cluster: Mitochondrial transcription factor B1; ...   101   1e-20
UniRef50_Q4RP08 Cluster: Chromosome 10 SCAF15009, whole genome s...   100   7e-20
UniRef50_Q1A706 Cluster: Mitochondrial transcription factor B-li...    98   2e-19
UniRef50_Q54M56 Cluster: Putative uncharacterized protein; n=1; ...    93   6e-18
UniRef50_P91424 Cluster: Mitochondrial dimethyladenosine transfe...    83   7e-15
UniRef50_A7SV30 Cluster: Predicted protein; n=1; Nematostella ve...    82   1e-14
UniRef50_A7DG65 Cluster: Dimethyladenosine transferase; n=3; Alp...    81   2e-14
UniRef50_Q28RD6 Cluster: Dimethyladenosine transferase (EC 2.1.1...    81   2e-14
UniRef50_A5CCR2 Cluster: Dimethyladenosine transferase; n=1; Ori...    77   3e-13
UniRef50_Q92GV0 Cluster: Dimethyladenosine transferase (EC 2.1.1...    77   3e-13
UniRef50_Q68W66 Cluster: Dimethyladenosine transferase (EC 2.1.1...    74   4e-12
UniRef50_Q5FU61 Cluster: Dimethyladenosine transferase (EC 2.1.1...    71   2e-11
UniRef50_Q0C094 Cluster: Dimethyladenosine transferase; n=1; Hyp...    70   5e-11
UniRef50_Q2GGH6 Cluster: Dimethyladenosine transferase (EC 2.1.1...    64   2e-09
UniRef50_Q73IR3 Cluster: Dimethyladenosine transferase (EC 2.1.1...    62   2e-08
UniRef50_Q5PAV9 Cluster: Dimethyladenosine transferase (EC 2.1.1...    61   2e-08
UniRef50_Q4FMR0 Cluster: Dimethyladenosine transferase (EC 2.1.1...    58   2e-07
UniRef50_Q1EV92 Cluster: 16S rRNA dimethylase; n=5; Clostridiale...    55   1e-06
UniRef50_A6LJL0 Cluster: Dimethyladenosine transferase; n=1; The...    54   3e-06
UniRef50_Q2AIZ1 Cluster: RRNA 16S rRNA dimethylase; n=1; Halothe...    54   3e-06
UniRef50_Q6F2B4 Cluster: Dimethyladenosine transferase (EC 2.1.1...    52   1e-05
UniRef50_Q10A12 Cluster: Dimethyladenosine transferase, putative...    52   2e-05
UniRef50_Q6ME80 Cluster: Dimethyladenosine transferase (EC 2.1.1...    52   2e-05
UniRef50_Q2GE45 Cluster: Dimethyladenosine transferase (EC 2.1.1...    52   2e-05
UniRef50_Q4A645 Cluster: Dimethyladenosine transferase (EC 2.1.1...    52   2e-05
UniRef50_Q81W00 Cluster: Dimethyladenosine transferase (EC 2.1.1...    52   2e-05
UniRef50_Q3ZZE6 Cluster: Dimethyladenosine transferase (EC 2.1.1...    51   2e-05
UniRef50_Q98RJ3 Cluster: Dimethyladenosine transferase (EC 2.1.1...    51   3e-05
UniRef50_Q3A8X5 Cluster: Dimethyladenosine transferase (EC 2.1.1...    51   3e-05
UniRef50_Q4RYG8 Cluster: Chromosome 2 SCAF14976, whole genome sh...    50   4e-05
UniRef50_Q8XHG8 Cluster: Dimethyladenosine transferase (EC 2.1.1...    50   4e-05
UniRef50_Q30ZP0 Cluster: Dimethyladenosine transferase (EC 2.1.1...    50   6e-05
UniRef50_Q9RU68 Cluster: Dimethyladenosine transferase (EC 2.1.1...    50   6e-05
UniRef50_A4M7V1 Cluster: Dimethyladenosine transferase; n=1; Pet...    49   1e-04
UniRef50_A0V2P8 Cluster: Dimethyladenosine transferase; n=3; Clo...    49   1e-04
UniRef50_Q67JB9 Cluster: Dimethyladenosine transferase (EC 2.1.1...    49   1e-04
UniRef50_Q8RDC8 Cluster: Dimethyladenosine transferase (EC 2.1.1...    49   1e-04
UniRef50_Q03VR7 Cluster: Dimethyladenosine transferase; n=1; Leu...    48   2e-04
UniRef50_A0LA32 Cluster: Dimethyladenosine transferase; n=1; Mag...    48   2e-04
UniRef50_Q72GC7 Cluster: Dimethyladenosine transferase (EC 2.1.1...    48   2e-04
UniRef50_Q88Z93 Cluster: Dimethyladenosine transferase (EC 2.1.1...    48   2e-04
UniRef50_Q4JU23 Cluster: Dimethyladenosine transferase (EC 2.1.1...    48   2e-04
UniRef50_A5VI09 Cluster: Dimethyladenosine transferase; n=2; Lac...    48   2e-04
UniRef50_Q20033 Cluster: Putative uncharacterized protein; n=2; ...    48   2e-04
UniRef50_Q8PU18 Cluster: Probable dimethyladenosine transferase ...    48   2e-04
UniRef50_Q8KE87 Cluster: Dimethyladenosine transferase (EC 2.1.1...    48   3e-04
UniRef50_Q1ILA1 Cluster: Dimethyladenosine transferase (EC 2.1.1...    48   3e-04
UniRef50_Q14IY7 Cluster: Dimethyladenosine transferase (EC 2.1.1...    47   4e-04
UniRef50_Q2NE42 Cluster: Probable dimethyladenosine transferase ...    47   5e-04
UniRef50_Q8YAE2 Cluster: Dimethyladenosine transferase (EC 2.1.1...    47   5e-04
UniRef50_Q8TWU7 Cluster: Probable dimethyladenosine transferase ...    46   7e-04
UniRef50_UPI0000E47266 Cluster: PREDICTED: similar to CG7319-PC;...    46   0.001
UniRef50_A5CWN2 Cluster: Dimethyladenosine transferase; n=2; sul...    46   0.001
UniRef50_A4E9N6 Cluster: Putative uncharacterized protein; n=1; ...    46   0.001
UniRef50_A3DML9 Cluster: Ribosomal RNA adenine methylase transfe...    46   0.001
UniRef50_Q6KH80 Cluster: Dimethyladenosine transferase (EC 2.1.1...    46   0.001
UniRef50_A6NV94 Cluster: Putative uncharacterized protein; n=1; ...    45   0.002
UniRef50_A4RFU0 Cluster: Putative uncharacterized protein; n=1; ...    45   0.002
UniRef50_UPI0000F1DBDD Cluster: PREDICTED: similar to MGC84009 p...    45   0.002
UniRef50_Q0W2E6 Cluster: Putative dimethyladenosine rRNA methylt...    45   0.002
UniRef50_A5UN01 Cluster: Dimethyladenosine transferase, KsgA; n=...    45   0.002
UniRef50_Q8EU92 Cluster: Dimethyladenosine transferase (EC 2.1.1...    45   0.002
UniRef50_Q1MR01 Cluster: Dimethyladenosine transferase (EC 2.1.1...    45   0.002
UniRef50_Q14QK5 Cluster: Putative dimethyladenosine transferase ...    44   0.003
UniRef50_A7B6D9 Cluster: Putative uncharacterized protein; n=1; ...    44   0.003
UniRef50_A5UPY4 Cluster: Dimethyladenosine transferase; n=4; Chl...    44   0.003
UniRef50_Q8KA00 Cluster: Dimethyladenosine transferase (EC 2.1.1...    44   0.003
UniRef50_Q6GM33 Cluster: MGC84009 protein; n=2; Xenopus|Rep: MGC...    44   0.004
UniRef50_Q9FK02 Cluster: Dimethyladenosine transferase-like prot...    44   0.004
UniRef50_Q8L867 Cluster: Dimethyladenosine transferase-like prot...    44   0.004
UniRef50_Q4N282 Cluster: Dimethyladenosine transferase, putative...    44   0.004
UniRef50_Q74C12 Cluster: Dimethyladenosine transferase (EC 2.1.1...    44   0.004
UniRef50_Q251W8 Cluster: Dimethyladenosine transferase (EC 2.1.1...    44   0.004
UniRef50_Q7QT63 Cluster: GLP_13_6796_7746; n=1; Giardia lamblia ...    44   0.005
UniRef50_Q87ST6 Cluster: Dimethyladenosine transferase (EC 2.1.1...    44   0.005
UniRef50_P45439 Cluster: rRNA adenine N-6-methyltransferase; n=5...    44   0.005
UniRef50_A1I9H4 Cluster: Dimethyladenosine transferase; n=1; Can...    43   0.006
UniRef50_A7SNR6 Cluster: Predicted protein; n=1; Nematostella ve...    43   0.006
UniRef50_Q6YPJ4 Cluster: Dimethyladenosine transferase (EC 2.1.1...    43   0.006
UniRef50_Q7NC69 Cluster: Dimethyladenosine transferase (EC 2.1.1...    43   0.006
UniRef50_Q9USU2 Cluster: Dimethyladenosine transferase (EC 2.1.1...    43   0.009
UniRef50_Q9ZGI6 Cluster: RRNA methyltransferase PikR1; n=1; Stre...    42   0.011
UniRef50_Q0EVS5 Cluster: Dimethyladenosine transferase; n=1; Mar...    42   0.011
UniRef50_Q1JDL6 Cluster: Dimethyladenosine transferase (EC 2.1.1...    42   0.011
UniRef50_O59487 Cluster: Probable dimethyladenosine transferase ...    42   0.011
UniRef50_P66661 Cluster: Dimethyladenosine transferase (EC 2.1.1...    42   0.011
UniRef50_Q60B77 Cluster: Dimethyladenosine transferase (EC 2.1.1...    42   0.011
UniRef50_Q5L6H5 Cluster: Dimethyladenosine transferase (EC 2.1.1...    42   0.011
UniRef50_O67680 Cluster: Dimethyladenosine transferase (EC 2.1.1...    42   0.011
UniRef50_Q2IFT9 Cluster: Dimethyladenosine transferase (EC 2.1.1...    42   0.011
UniRef50_Q6BSY5 Cluster: Dimethyladenosine transferase (EC 2.1.1...    42   0.011
UniRef50_Q9UNQ2 Cluster: Probable dimethyladenosine transferase ...    42   0.011
UniRef50_Q8GDV8 Cluster: Dimethyladenosine transferase; n=1; Hel...    42   0.015
UniRef50_Q9PPN8 Cluster: Dimethyladenosine transferase (EC 2.1.1...    42   0.015
UniRef50_P41819 Cluster: Dimethyladenosine transferase (EC 2.1.1...    42   0.015
UniRef50_Q1EZ10 Cluster: RRNA (Adenine-N(6)-)-methyltransferase;...    42   0.020
UniRef50_Q319T0 Cluster: Nucleotide-diphosphate-sugar epimerase,...    41   0.026
UniRef50_P43433 Cluster: Mycinamicin-resistance protein myrB; n=...    41   0.026
UniRef50_Q8G6I3 Cluster: Dimethyladenosine transferase (EC 2.1.1...    41   0.026
UniRef50_Q9Y2R0 Cluster: Coiled-coil domain-containing protein 5...    41   0.026
UniRef50_Q2BK13 Cluster: Dimethyladenosine transferase; n=2; Gam...    41   0.034
UniRef50_A4BLW2 Cluster: Dimethyladenosine transferase; n=1; Nit...    41   0.034
UniRef50_A0LNI3 Cluster: Dimethyladenosine transferase; n=1; Syn...    41   0.034
UniRef50_Q5CXI8 Cluster: Dim1p-like ERMB/KSGA methylase; n=2; Cr...    41   0.034
UniRef50_Q4Q7U7 Cluster: Ribosomal RNA adenine dimethylase famil...    41   0.034
UniRef50_O51536 Cluster: Dimethyladenosine transferase (EC 2.1.1...    41   0.034
UniRef50_UPI00003AC944 Cluster: PREDICTED: similar to HSPC009; n...    40   0.045
UniRef50_Q057Y3 Cluster: Dimethyladenosine transferase; n=1; Buc...    40   0.045
UniRef50_A7HGZ5 Cluster: Dimethyladenosine transferase; n=1; Ana...    40   0.045
UniRef50_A3U413 Cluster: Putative uncharacterized protein; n=2; ...    40   0.045
UniRef50_UPI0000D9B5BF Cluster: PREDICTED: similar to CG7319-PC,...    40   0.060
UniRef50_Q5YW73 Cluster: Putative ribosomal RNA adenine N-6-meth...    40   0.060
UniRef50_A6DRB2 Cluster: Dimethyladenosine transferase; n=1; Len...    40   0.060
UniRef50_A0E6J3 Cluster: Chromosome undetermined scaffold_8, who...    40   0.060
UniRef50_Q5V588 Cluster: Probable dimethyladenosine transferase ...    40   0.060
UniRef50_Q9PLW7 Cluster: Dimethyladenosine transferase (EC 2.1.1...    40   0.060
UniRef50_Q1NUM3 Cluster: 16S rRNA dimethylase; n=2; delta proteo...    40   0.079
UniRef50_A5IXI9 Cluster: Dimethyladenosine transferase(S-adenosy...    40   0.079
UniRef50_A5EY68 Cluster: RRNA adenine dimethylase; n=1; Dichelob...    40   0.079
UniRef50_Q1NYL1 Cluster: Dimethyladenosine transferase; n=1; Can...    39   0.10 
UniRef50_A0LC43 Cluster: Methyltransferase type 12; n=1; Magneto...    39   0.10 
UniRef50_Q74LI0 Cluster: Dimethyladenosine transferase (EC 2.1.1...    39   0.10 
UniRef50_A6C441 Cluster: Dimethyladenosine transferase; n=1; Pla...    39   0.14 
UniRef50_Q30NR7 Cluster: Dimethyladenosine transferase (EC 2.1.1...    39   0.14 
UniRef50_Q5ZZN4 Cluster: Dimethyladenosine transferase (EC 2.1.1...    39   0.14 
UniRef50_P07287 Cluster: rRNA adenine N-6-methyltransferase; n=6...    39   0.14 
UniRef50_A7CY98 Cluster: Ribosomal RNA adenine methylase transfe...    38   0.18 
UniRef50_Q4D084 Cluster: RRNA dimethyltransferase, putative; n=7...    38   0.18 
UniRef50_Q9PBJ6 Cluster: Dimethyladenosine transferase (EC 2.1.1...    38   0.18 
UniRef50_Q7VM33 Cluster: Dimethyladenosine transferase (EC 2.1.1...    38   0.18 
UniRef50_Q8R6B1 Cluster: Dimethyladenosine transferase (EC 2.1.1...    38   0.18 
UniRef50_Q6MQ47 Cluster: Dimethyladenosine transferase (EC 2.1.1...    38   0.18 
UniRef50_UPI000023DDF8 Cluster: hypothetical protein FG05049.1; ...    38   0.24 
UniRef50_Q0LDX5 Cluster: Dimethyladenosine transferase; n=1; Her...    38   0.24 
UniRef50_A5GEC6 Cluster: Phospholipid N-methyltransferase-like p...    38   0.24 
UniRef50_O27381 Cluster: Probable dimethyladenosine transferase ...    38   0.24 
UniRef50_Q01V27 Cluster: Dimethyladenosine transferase; n=1; Sol...    38   0.32 
UniRef50_A4S2A3 Cluster: Predicted protein; n=2; Ostreococcus|Re...    38   0.32 
UniRef50_A2EVN6 Cluster: Dimethyladenosine transferase family pr...    38   0.32 
UniRef50_P75113 Cluster: Dimethyladenosine transferase (EC 2.1.1...    38   0.32 
UniRef50_P13079 Cluster: rRNA methyltransferase; n=1; Streptomyc...    38   0.32 
UniRef50_Q4RKQ6 Cluster: Chromosome 5 SCAF15026, whole genome sh...    37   0.42 
UniRef50_Q8D3I1 Cluster: Dimethyladenosine transferase (EC 2.1.1...    37   0.42 
UniRef50_Q5F9W4 Cluster: Dimethyladenosine transferase (EC 2.1.1...    37   0.42 
UniRef50_Q0B0U3 Cluster: RRNA (Adenine-N(6)-)-methyltransferase;...    37   0.56 
UniRef50_O65090 Cluster: Dimethyladenosine transferase; n=6; Mag...    37   0.56 
UniRef50_A2X0B1 Cluster: Putative uncharacterized protein; n=2; ...    37   0.56 
UniRef50_Q5KP18 Cluster: Mitochondrion protein, putative; n=1; F...    37   0.56 
UniRef50_O83357 Cluster: Dimethyladenosine transferase (EC 2.1.1...    37   0.56 
UniRef50_UPI0000E87DD3 Cluster: dimethyladenosine transferase; n...    36   0.74 
UniRef50_A7HK88 Cluster: Dimethyladenosine transferase; n=1; Fer...    36   0.74 
UniRef50_Q2S0I2 Cluster: Dimethyladenosine transferase (EC 2.1.1...    36   0.74 
UniRef50_Q4FT44 Cluster: Dimethyladenosine transferase (EC 2.1.1...    36   0.74 
UniRef50_Q6AL71 Cluster: Dimethyladenosine transferase (EC 2.1.1...    36   0.74 
UniRef50_Q46194 Cluster: 23S rRNA methlyase; n=1; Clostridium pe...    36   0.98 
UniRef50_Q74MB4 Cluster: NEQ337; n=1; Nanoarchaeum equitans|Rep:...    36   0.98 
UniRef50_Q7U7D3 Cluster: Dimethyladenosine transferase (EC 2.1.1...    36   0.98 
UniRef50_Q8Y219 Cluster: Dimethyladenosine transferase (EC 2.1.1...    36   0.98 
UniRef50_Q2FSA9 Cluster: Probable dimethyladenosine transferase ...    36   0.98 
UniRef50_A5K171 Cluster: Dimethyladenosine transferase, putative...    36   1.3  
UniRef50_UPI0000ECC87F Cluster: Mitochondrial dimethyladenosine ...    35   1.7  
UniRef50_A0HAD5 Cluster: Phospholipid N-methyltransferase-like; ...    35   1.7  
UniRef50_Q5ENQ8 Cluster: Chloroplast dimethyladenosine synthase;...    35   1.7  
UniRef50_Q0UUN9 Cluster: Predicted protein; n=4; Pezizomycotina|...    35   1.7  
UniRef50_Q62MM2 Cluster: Dimethyladenosine transferase (EC 2.1.1...    35   1.7  
UniRef50_Q9YEM5 Cluster: Probable dimethyladenosine transferase ...    35   1.7  
UniRef50_Q9VAQ5 Cluster: Probable dimethyladenosine transferase ...    35   1.7  
UniRef50_Q1JYS9 Cluster: Dimethyladenosine transferase; n=1; Des...    35   2.3  
UniRef50_Q5PDD9 Cluster: Dimethyladenosine transferase (EC 2.1.1...    35   2.3  
UniRef50_Q9ZGI7 Cluster: RRNA methyltransferase PikR2; n=12; Act...    34   3.0  
UniRef50_A2BNB0 Cluster: Dimethyladenosine transferase; n=1; Hyp...    34   3.0  
UniRef50_Q7UIR4 Cluster: Dimethyladenosine transferase (EC 2.1.1...    34   3.0  
UniRef50_Q391A1 Cluster: Phospholipid N-methyltransferase-like; ...    34   3.9  
UniRef50_Q1NNF3 Cluster: Putative uncharacterized protein; n=1; ...    34   3.9  
UniRef50_A6GDM4 Cluster: Dimethyladenosine transferase; n=1; Ple...    34   3.9  
UniRef50_P10738 Cluster: rRNA adenine N-6-methyltransferase; n=1...    34   3.9  
UniRef50_Q5FNE6 Cluster: Na+/H+ antiporter; n=1; Gluconobacter o...    33   5.2  
UniRef50_Q3IPP8 Cluster: Homolog 1 to S-adenosylmethionine-depen...    33   5.2  
UniRef50_Q121Q5 Cluster: Dimethyladenosine transferase (EC 2.1.1...    33   5.2  
UniRef50_Q39GE3 Cluster: Ribosomal RNA adenine methylase transfe...    33   6.9  
UniRef50_Q1MYH8 Cluster: Transcriptional regulator, ArsR family ...    33   6.9  
UniRef50_A5E8J6 Cluster: Phospholipid N-methyltransferase; n=14;...    33   6.9  
UniRef50_A3I4Y3 Cluster: Acetoin dehydrogenase, E3 component, di...    33   6.9  
UniRef50_O25972 Cluster: Dimethyladenosine transferase (EC 2.1.1...    33   6.9  
UniRef50_UPI00005851F1 Cluster: PREDICTED: similar to chondroiti...    33   9.1  
UniRef50_A7AJ09 Cluster: Putative uncharacterized protein; n=1; ...    33   9.1  

>UniRef50_UPI0000DB6CEA Cluster: PREDICTED: similar to CG7319-PC,
           isoform C; n=1; Apis mellifera|Rep: PREDICTED: similar
           to CG7319-PC, isoform C - Apis mellifera
          Length = 420

 Score =  118 bits (284), Expect = 1e-25
 Identities = 51/94 (54%), Positives = 74/94 (78%)
 Frame = +2

Query: 236 TDKAASIPSIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGG 415
           T +   +PSIKDV+K+Y+LRA++ELSQNF++   L DKI++ +GN+ +  V E+GPGPG 
Sbjct: 80  TIRLPPLPSIKDVLKIYRLRAMKELSQNFILNQNLADKIIKKTGNLNDCHVLEIGPGPGA 139

Query: 416 ITRSIIRQAPKKLVLIEKDPRFLPSLELLADLVE 517
           +TRSI++  PKKL+++EKD RF P+LE+LAD  E
Sbjct: 140 LTRSILKCQPKKLIVVEKDKRFEPTLEMLADAFE 173



 Score = 49.2 bits (112), Expect = 1e-04
 Identities = 20/38 (52%), Positives = 29/38 (76%)
 Frame = +1

Query: 94  LTGFTIGAGVLGVYLYSIFAIKQETFLDDFDEPPKIQQ 207
           + G +I +  LG+YLY+I A+KQETFL+D +EP KI +
Sbjct: 24  IAGISIASVALGIYLYTIHAVKQETFLNDLNEPEKIMK 61



 Score = 33.9 bits (74), Expect = 3.9
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = +1

Query: 529 VDIITGDILKTDLSQFIPSDAKVHWLDSTFHQFTSLGNLPFSVST 663
           ++II  DI+K ++S   PS     W +    +   +GNLPF+VST
Sbjct: 179 MEIIFDDIMKINMSNLFPSTEIKAWTEKC-PRIKLIGNLPFNVST 222


>UniRef50_UPI00015B45ED Cluster: PREDICTED: similar to
           dimethyladenosine transferase; n=1; Nasonia
           vitripennis|Rep: PREDICTED: similar to dimethyladenosine
           transferase - Nasonia vitripennis
          Length = 262

 Score =  114 bits (275), Expect = 2e-24
 Identities = 51/86 (59%), Positives = 69/86 (80%)
 Frame = +2

Query: 257 PSIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIR 436
           P+I+D+IKLY+L A+++LSQNFLM   L DKIV++ G I N  V EVGPGPGGITRSI++
Sbjct: 10  PTIRDIIKLYRLSAIKQLSQNFLMNEALTDKIVKSVGKIYNSQVLEVGPGPGGITRSILK 69

Query: 437 QAPKKLVLIEKDPRFLPSLELLADLV 514
           + PKKL+++EKD RF P L+L+  +V
Sbjct: 70  KNPKKLIVVEKDQRFRPILDLMESIV 95


>UniRef50_Q1A705 Cluster: Mitochondrial dimethyladenosine
           transferase 1, mitochondrial precursor (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase 1); n=1; Hartmannella
           vermiformis|Rep: Mitochondrial dimethyladenosine
           transferase 1, mitochondrial precursor (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase 1) - Hartmannella vermiformis
           (Amoeba)
          Length = 343

 Score =  108 bits (260), Expect = 1e-22
 Identities = 50/90 (55%), Positives = 72/90 (80%)
 Frame = +2

Query: 233 ITDKAASIPSIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPG 412
           +T +   +P+I ++I+L+ L A ++LSQNFL++  + DKIVR+SG++ N TV EVGPGPG
Sbjct: 1   MTMRLPPLPTIGELIRLFGLSAKQQLSQNFLLDLNITDKIVRSSGDLTNKTVIEVGPGPG 60

Query: 413 GITRSIIRQAPKKLVLIEKDPRFLPSLELL 502
           G+TRSI++   KKLV+IEKD RFLP+LE+L
Sbjct: 61  GLTRSILKAGAKKLVVIEKDRRFLPALEVL 90


>UniRef50_Q9VTM5 Cluster: Mitochondrial dimethyladenosine
           transferase 1, mitochondrial precursor (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase 1); n=8; Coelomata|Rep:
           Mitochondrial dimethyladenosine transferase 1,
           mitochondrial precursor (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase 1) - Drosophila melanogaster (Fruit
           fly)
          Length = 330

 Score =  107 bits (258), Expect = 2e-22
 Identities = 49/86 (56%), Positives = 72/86 (83%), Gaps = 1/86 (1%)
 Frame = +2

Query: 254 IPSIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQ-NHTVCEVGPGPGGITRSI 430
           +P+I++++KLY+L+A ++LSQNFLM+ RL DKIV+++G I     V EVGPGPGGITRSI
Sbjct: 18  MPTIRELVKLYRLQARKQLSQNFLMDERLTDKIVKSAGRIDPRDLVLEVGPGPGGITRSI 77

Query: 431 IRQAPKKLVLIEKDPRFLPSLELLAD 508
           +R+ P++L+L+EKDPRF  +L+LL +
Sbjct: 78  LRRHPQRLLLVEKDPRFGETLQLLKE 103


>UniRef50_Q8WVM0 Cluster: Mitochondrial dimethyladenosine
           transferase 1, mitochondrial precursor (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase 1); n=27; Deuterostomia|Rep:
           Mitochondrial dimethyladenosine transferase 1,
           mitochondrial precursor (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase 1) - Homo sapiens (Human)
          Length = 346

 Score =  107 bits (256), Expect = 3e-22
 Identities = 48/91 (52%), Positives = 71/91 (78%)
 Frame = +2

Query: 236 TDKAASIPSIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGG 415
           T +   +P+I+++IKL +L+A ++LSQNFL++ RL DKIVR +GN+ N  V EVGPGPGG
Sbjct: 9   TCRLPPLPTIREIIKLLRLQAAKQLSQNFLLDLRLTDKIVRKAGNLTNAYVYEVGPGPGG 68

Query: 416 ITRSIIRQAPKKLVLIEKDPRFLPSLELLAD 508
           ITRSI+     +L+++EKD RF+P L++L+D
Sbjct: 69  ITRSILNADVAELLVVEKDTRFIPGLQMLSD 99


>UniRef50_Q2PQU7 Cluster: Mitochondrial transcription factor B1;
           n=9; Tigriopus californicus|Rep: Mitochondrial
           transcription factor B1 - Tigriopus californicus (Marine
           copepod)
          Length = 365

 Score =  101 bits (243), Expect = 1e-20
 Identities = 43/95 (45%), Positives = 69/95 (72%)
 Frame = +2

Query: 254 IPSIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSII 433
           +PS +D+++LY +R+ R LSQNF+++PR +DKI R +G +   TV E+GPGPGGITR++I
Sbjct: 12  LPSTRDLLRLYGIRSKRSLSQNFILDPRTLDKIARTAGPLAGQTVVEIGPGPGGITRALI 71

Query: 434 RQAPKKLVLIEKDPRFLPSLELLADLVEIKSMLTL 538
               +++V+IEKD RFL  L LL +  + + ++ +
Sbjct: 72  GNGARQVVVIEKDARFLSPLRLLQEAAQGRIIINM 106



 Score = 33.1 bits (72), Expect = 6.9
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +1

Query: 544 GDILKTDLSQFIPSDAKVHWLDSTFHQFTSLGNLPFSVSTNF 669
           GD+LK +LS+F+ ++ +  W          + NLPF+++  F
Sbjct: 107 GDVLKVNLSKFLDAELRQPWDSPQVPDIRLVSNLPFNITMPF 148


>UniRef50_Q4RP08 Cluster: Chromosome 10 SCAF15009, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 10 SCAF15009, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 286

 Score = 99.5 bits (237), Expect = 7e-20
 Identities = 43/82 (52%), Positives = 64/82 (78%)
 Frame = +2

Query: 254 IPSIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSII 433
           +P++ ++IKLY LRA ++LSQNFL++ +L DKIVR +G ++   VCEVGPGPGG+TRSI+
Sbjct: 15  LPTVGELIKLYNLRAEKQLSQNFLLDLKLTDKIVRQAGCLKGAHVCEVGPGPGGLTRSIL 74

Query: 434 RQAPKKLVLIEKDPRFLPSLEL 499
                 L+++EKD RF+P L++
Sbjct: 75  NAGAADLLVVEKDSRFIPGLKV 96


>UniRef50_Q1A706 Cluster: Mitochondrial transcription factor B-like
           protein; n=1; Acanthamoeba castellanii|Rep:
           Mitochondrial transcription factor B-like protein -
           Acanthamoeba castellanii (Amoeba)
          Length = 307

 Score = 97.9 bits (233), Expect = 2e-19
 Identities = 39/87 (44%), Positives = 67/87 (77%)
 Frame = +2

Query: 242 KAASIPSIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGIT 421
           K   +P+ +++++LY+L A++ELSQNF+++  + DK+ RA+G ++  TV EVGPGPG +T
Sbjct: 3   KLPPMPTPRELVRLYRLSAVKELSQNFILDLNVTDKLARAAGPLRGSTVIEVGPGPGSLT 62

Query: 422 RSIIRQAPKKLVLIEKDPRFLPSLELL 502
           RS++    +K++++EKD RF+P+LE L
Sbjct: 63  RSLLTNGARKVIVVEKDKRFMPALETL 89


>UniRef50_Q54M56 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 485

 Score = 93.1 bits (221), Expect = 6e-18
 Identities = 39/92 (42%), Positives = 64/92 (69%)
 Frame = +2

Query: 233 ITDKAASIPSIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPG 412
           +T     +P I+++I+++ L A ++LSQNFL++  + DKI + SG   + TV EVG GPG
Sbjct: 6   LTTSLPPMPKIQEIIRIFGLSAKQQLSQNFLIDKNITDKICKKSGGFDDCTVIEVGAGPG 65

Query: 413 GITRSIIRQAPKKLVLIEKDPRFLPSLELLAD 508
           G+TRS++    KK++ +E DPRF P+L++L +
Sbjct: 66  GLTRSLLTSGAKKVIAVEMDPRFYPALKMLEE 97


>UniRef50_P91424 Cluster: Mitochondrial dimethyladenosine
           transferase 1, mitochondrial precursor (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase 1); n=2; Caenorhabditis|Rep:
           Mitochondrial dimethyladenosine transferase 1,
           mitochondrial precursor (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase 1) - Caenorhabditis elegans
          Length = 367

 Score = 83.0 bits (196), Expect = 7e-15
 Identities = 37/93 (39%), Positives = 62/93 (66%)
 Frame = +2

Query: 254 IPSIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSII 433
           +P+++D I +Y+LRA + LSQN+LM+  +  KI + +  I+   V E+GPGPGGITR+I+
Sbjct: 10  LPALRDFIHMYRLRAKKILSQNYLMDMNITRKIAKHAKVIEKDWVIEIGPGPGGITRAIL 69

Query: 434 RQAPKKLVLIEKDPRFLPSLELLADLVEIKSML 532
                +L ++E D RF+P L+ LA+  + +  +
Sbjct: 70  EAGASRLDVVEIDNRFIPPLQHLAEAADSRMFI 102


>UniRef50_A7SV30 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 325

 Score = 82.2 bits (194), Expect = 1e-14
 Identities = 40/95 (42%), Positives = 62/95 (65%)
 Frame = +2

Query: 254 IPSIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSII 433
           +P + D+++LY L A ++ SQNF+++  + DKI + S ++ +  VCEVG GPG +TRSI+
Sbjct: 8   MPKVSDLLRLYGLTAQKQFSQNFILDLNITDKIAKVS-DVFDCYVCEVGAGPGSLTRSIL 66

Query: 434 RQAPKKLVLIEKDPRFLPSLELLADLVEIKSMLTL 538
               + +  +E D RFLPSL+LL D    K  +TL
Sbjct: 67  NAGARHVAAVEIDRRFLPSLQLLEDAA--KGRMTL 99


>UniRef50_A7DG65 Cluster: Dimethyladenosine transferase; n=3;
           Alphaproteobacteria|Rep: Dimethyladenosine transferase -
           Methylobacterium extorquens PA1
          Length = 415

 Score = 81.4 bits (192), Expect = 2e-14
 Identities = 35/84 (41%), Positives = 58/84 (69%)
 Frame = +2

Query: 254 IPSIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSII 433
           +P +++V++ + L   + L QNFL +  L  +I R++G ++  TV EVGPGPGG+TR+++
Sbjct: 130 LPPLREVVRRHGLEPKKALGQNFLFDLNLTGRIARSAGALEGVTVVEVGPGPGGLTRALL 189

Query: 434 RQAPKKLVLIEKDPRFLPSLELLA 505
               K++V IE+DPR LP+L  +A
Sbjct: 190 AAGAKRVVAIERDPRALPALAEIA 213


>UniRef50_Q28RD6 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=35; Alphaproteobacteria|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Jannaschia sp. (strain CCS1)
          Length = 289

 Score = 81.4 bits (192), Expect = 2e-14
 Identities = 36/80 (45%), Positives = 55/80 (68%)
 Frame = +2

Query: 254 IPSIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSII 433
           +P ++DVI  + L A + L QNFL++  L  KI R +G++ +  V EVGPGPGG+TR ++
Sbjct: 7   LPPLRDVIAAHGLSARKALGQNFLLDLNLTAKIARLAGDLTSVDVLEVGPGPGGLTRGLL 66

Query: 434 RQAPKKLVLIEKDPRFLPSL 493
            +  +++V +EKDPR LP L
Sbjct: 67  AEGARRVVAVEKDPRCLPVL 86


>UniRef50_A5CCR2 Cluster: Dimethyladenosine transferase; n=1;
           Orientia tsutsugamushi Boryong|Rep: Dimethyladenosine
           transferase - Orientia tsutsugamushi (strain Boryong)
           (Rickettsia tsutsugamushi)
          Length = 273

 Score = 77.4 bits (182), Expect = 3e-13
 Identities = 36/81 (44%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
 Frame = +2

Query: 254 IPSIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGN-IQNHTVCEVGPGPGGITRSI 430
           +P++   +KL+K+ A + L Q+FL++  + +KIV  + N I    V EVGPGPGG+TR+I
Sbjct: 4   LPTVSQHMKLHKITANKSLGQHFLLDSNICNKIVSVAPNSITGKVVLEVGPGPGGLTRAI 63

Query: 431 IRQAPKKLVLIEKDPRFLPSL 493
           +   PKKL++IEKD  F+  L
Sbjct: 64  LAHNPKKLIVIEKDASFIELL 84


>UniRef50_Q92GV0 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=8; Rickettsia|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Rickettsia conorii
          Length = 301

 Score = 77.4 bits (182), Expect = 3e-13
 Identities = 37/80 (46%), Positives = 53/80 (66%)
 Frame = +2

Query: 254 IPSIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSII 433
           +PSI     L+++  L++  QNF+ +  L DKIVRAS   +N  V E+GPG GG+TRSI+
Sbjct: 2   LPSIAKHAALHQVNPLKKHGQNFIFDSSLCDKIVRASNLAENSRVLEIGPGTGGLTRSIL 61

Query: 434 RQAPKKLVLIEKDPRFLPSL 493
           ++ P+ L +IE D R LP L
Sbjct: 62  QKNPESLTVIETDARCLPLL 81


>UniRef50_Q68W66 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=4; Rickettsia|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Rickettsia typhi
          Length = 268

 Score = 73.7 bits (173), Expect = 4e-12
 Identities = 35/80 (43%), Positives = 51/80 (63%)
 Frame = +2

Query: 254 IPSIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSII 433
           +PSI      +++  L++  QNF+ +  L DKI+RAS   +N  V E+GPG GG+TRSI+
Sbjct: 2   LPSIAKHAASHQINPLKKHGQNFIFDSSLCDKIIRASNISENSKVIEIGPGVGGLTRSIL 61

Query: 434 RQAPKKLVLIEKDPRFLPSL 493
            + PK L +IE D R +P L
Sbjct: 62  HKNPKSLTVIEIDERCIPLL 81


>UniRef50_Q5FU61 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=45; Alphaproteobacteria|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Gluconobacter oxydans
           (Gluconobacter suboxydans)
          Length = 303

 Score = 71.3 bits (167), Expect = 2e-11
 Identities = 31/85 (36%), Positives = 55/85 (64%)
 Frame = +2

Query: 251 SIPSIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSI 430
           S+PS++D I+ + L A + L Q+FL++P +  +I    G++   +V E+GPGPGG+TR++
Sbjct: 33  SLPSLRDTIQAHGLDAKKSLGQHFLLDPGICARIAALGGDLTGRSVVEIGPGPGGLTRAL 92

Query: 431 IRQAPKKLVLIEKDPRFLPSLELLA 505
           +     ++ ++E D R  P L+ LA
Sbjct: 93  LDTPASRVDVVEIDERAWPLLDELA 117


>UniRef50_Q0C094 Cluster: Dimethyladenosine transferase; n=1;
           Hyphomonas neptunium ATCC 15444|Rep: Dimethyladenosine
           transferase - Hyphomonas neptunium (strain ATCC 15444)
          Length = 285

 Score = 70.1 bits (164), Expect = 5e-11
 Identities = 29/66 (43%), Positives = 45/66 (68%)
 Frame = +2

Query: 296 ALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDP 475
           A + L Q+FL +P ++ +   A+G ++  TV EVGPGPGG+TR+I+ + P  L+ +E DP
Sbjct: 22  ARKALGQHFLFDPSILKRAANAAGPLKGKTVIEVGPGPGGLTRAILNEEPALLIAVETDP 81

Query: 476 RFLPSL 493
           RF  +L
Sbjct: 82  RFSEAL 87


>UniRef50_Q2GGH6 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=6; canis group|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Ehrlichia chaffeensis (strain
           Arkansas)
          Length = 263

 Score = 64.5 bits (150), Expect = 2e-09
 Identities = 29/64 (45%), Positives = 44/64 (68%)
 Frame = +2

Query: 287 KLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIE 466
           K+   +ELSQ F+    + D+IV  +GNI ++++ E+GPG G +T SI+ + PKKL+ IE
Sbjct: 6   KINPKKELSQCFISSTHITDQIVNYAGNISDYSIIEIGPGLGTMTYSILNKNPKKLISIE 65

Query: 467 KDPR 478
           KD R
Sbjct: 66  KDRR 69


>UniRef50_Q73IR3 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=4; Wolbachia|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Wolbachia pipientis wMel
          Length = 286

 Score = 61.7 bits (143), Expect = 2e-08
 Identities = 27/66 (40%), Positives = 42/66 (63%)
 Frame = +2

Query: 275 IKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKL 454
           +K + L+  + L QNF++   +  KIV  +G+++N  V E+GPG G +TR I+   PK L
Sbjct: 17  MKKFLLKPKKSLGQNFILSSEITKKIVALAGSLENFNVIEIGPGYGALTREILVHNPKSL 76

Query: 455 VLIEKD 472
           + IEKD
Sbjct: 77  LSIEKD 82


>UniRef50_Q5PAV9 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=2; Anaplasma|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Anaplasma marginale (strain St.
           Maries)
          Length = 270

 Score = 61.3 bits (142), Expect = 2e-08
 Identities = 27/65 (41%), Positives = 42/65 (64%)
 Frame = +2

Query: 293 RALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKD 472
           +A + L QNF+++P + +KIV  +G+I+ + + EVGPG G +T  I+R     L+ IEKD
Sbjct: 7   KAYKSLGQNFILDPSMAEKIVSYAGSIEGYNIIEVGPGFGTMTEIILRSKVASLLAIEKD 66

Query: 473 PRFLP 487
            R  P
Sbjct: 67  RRLSP 71


>UniRef50_Q4FMR0 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=2; Candidatus Pelagibacter
           ubique|Rep: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Pelagibacter ubique
          Length = 262

 Score = 58.0 bits (134), Expect = 2e-07
 Identities = 26/61 (42%), Positives = 43/61 (70%)
 Frame = +2

Query: 290 LRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEK 469
           ++A + L QNFL++  +++KIV  + +I N  V E+GPG G +T  I+++ PKKL ++EK
Sbjct: 3   VKAKKSLGQNFLIDREVLEKIVSIT-DITNKEVLEIGPGSGNLTTYILKKKPKKLYVVEK 61

Query: 470 D 472
           D
Sbjct: 62  D 62


>UniRef50_Q1EV92 Cluster: 16S rRNA dimethylase; n=5;
           Clostridiales|Rep: 16S rRNA dimethylase - Clostridium
           oremlandii OhILAs
          Length = 287

 Score = 55.2 bits (127), Expect = 1e-06
 Identities = 26/86 (30%), Positives = 49/86 (56%)
 Frame = +2

Query: 239 DKAASIPSIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGI 418
           D+ +S    K++++ Y+ +  + L QNFL++  ++D IV  +   +   + EVGPG G +
Sbjct: 2   DRISSPKKTKEIVQKYEFKFSKSLGQNFLIDQNILDNIVDGANVSEGDCIIEVGPGIGSL 61

Query: 419 TRSIIRQAPKKLVLIEKDPRFLPSLE 496
           T++I  +A   L  +E D   +P L+
Sbjct: 62  TQNIAERADSVLA-VEIDKTLIPILK 86


>UniRef50_A6LJL0 Cluster: Dimethyladenosine transferase; n=1;
           Thermosipho melanesiensis BI429|Rep: Dimethyladenosine
           transferase - Thermosipho melanesiensis BI429
          Length = 258

 Score = 54.4 bits (125), Expect = 3e-06
 Identities = 27/78 (34%), Positives = 42/78 (53%)
 Frame = +2

Query: 263 IKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQA 442
           + D +K Y ++ L+ L QNFL    +  KIV  +   +N  V E+GPG G +T  ++   
Sbjct: 3   VSDFLKEYNVKLLKGLGQNFLTNTHIAKKIVERADINENDVVLEIGPGAGTLTEFLVLTG 62

Query: 443 PKKLVLIEKDPRFLPSLE 496
             K++ +E D R  P LE
Sbjct: 63  -AKIIAVEIDKRLKPILE 79


>UniRef50_Q2AIZ1 Cluster: RRNA 16S rRNA dimethylase; n=1;
           Halothermothrix orenii H 168|Rep: RRNA 16S rRNA
           dimethylase - Halothermothrix orenii H 168
          Length = 301

 Score = 54.0 bits (124), Expect = 3e-06
 Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
 Frame = +2

Query: 239 DKAASIPS-IKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGG 415
           DK  + P    ++I+ Y L+  + L QNFL++  ++DKI+  +       V E+GPG G 
Sbjct: 2   DKVIATPGGTNEIIRKYNLKLHKGLGQNFLIDQNIVDKIINTADLNNEDIVIEIGPGIGS 61

Query: 416 ITRSIIRQAPKKLVLIEKDPRFLPSLELL 502
           +T+ I+ ++  ++   EKD R +  L  L
Sbjct: 62  LTQKIVPRS-GRVFAFEKDKRLVKVLREL 89


>UniRef50_Q6F2B4 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=3; Mollicutes|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Mesoplasma florum (Acholeplasma
           florum)
          Length = 267

 Score = 52.0 bits (119), Expect = 1e-05
 Identities = 26/70 (37%), Positives = 42/70 (60%)
 Frame = +2

Query: 287 KLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIE 466
           K+ A ++  QNF+ +  LI+KIV   GN ++  + E+GPG G +T+ ++ Q   K+V IE
Sbjct: 2   KVEAKKKFGQNFISDQNLINKIVSILGNDKDQLIIEIGPGTGALTK-LLAQKYNKVVAIE 60

Query: 467 KDPRFLPSLE 496
            D    P L+
Sbjct: 61  IDTDMEPILK 70


>UniRef50_Q10A12 Cluster: Dimethyladenosine transferase, putative,
           expressed; n=17; Eukaryota|Rep: Dimethyladenosine
           transferase, putative, expressed - Oryza sativa subsp.
           japonica (Rice)
          Length = 364

 Score = 51.6 bits (118), Expect = 2e-05
 Identities = 23/60 (38%), Positives = 35/60 (58%)
 Frame = +2

Query: 314 QNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPRFLPSL 493
           Q+ L  P L+D IV  +G     TV E+GPG G +T+ +++   K +V +E DPR +  L
Sbjct: 40  QHILRNPALVDSIVEKAGLKPTDTVLEIGPGTGNLTKRLLQAGVKAVVAVELDPRMVLEL 99


>UniRef50_Q6ME80 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=2; Candidatus Protochlamydia
           amoebophila UWE25|Rep: Dimethyladenosine transferase (EC
           2.1.1.-) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Protochlamydia amoebophila
           (strain UWE25)
          Length = 284

 Score = 51.6 bits (118), Expect = 2e-05
 Identities = 25/55 (45%), Positives = 38/55 (69%)
 Frame = +2

Query: 308 LSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKD 472
           LSQNFL++  +I KIVRAS     + V E+GPGPG +T++++ +    +V +EKD
Sbjct: 24  LSQNFLIDGNIIRKIVRASDVQPGNLVLEIGPGPGSLTQAML-EVEAHVVAVEKD 77


>UniRef50_Q2GE45 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=1; Neorickettsia sennetsu str.
           Miyayama|Rep: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Neorickettsia sennetsu (strain
           Miyayama)
          Length = 262

 Score = 51.6 bits (118), Expect = 2e-05
 Identities = 22/65 (33%), Positives = 41/65 (63%)
 Frame = +2

Query: 308 LSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPRFLP 487
           L Q+F+ +  ++DKI+ A+ +++   + E+G G G ++ +I+ + P  L+ +EKD RF  
Sbjct: 8   LGQHFIYDREVLDKIIDAATSVKGKHIFEIGAGSGTLSAAILLREPASLISVEKDKRFSE 67

Query: 488 SLELL 502
           SL  L
Sbjct: 68  SLSSL 72


>UniRef50_Q4A645 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=1; Mycoplasma synoviae 53|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Mycoplasma synoviae (strain 53)
          Length = 259

 Score = 51.6 bits (118), Expect = 2e-05
 Identities = 26/67 (38%), Positives = 42/67 (62%)
 Frame = +2

Query: 296 ALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDP 475
           A + L QNFL +  +I+KIV    NI+N  V E+GPG G +T+ ++++A KK++  E D 
Sbjct: 8   AKKSLGQNFLRDKNIINKIVNVF-NIENEKVLEIGPGQGDLTKELLKKA-KKVLAFEIDK 65

Query: 476 RFLPSLE 496
             +  L+
Sbjct: 66  SLIEHLK 72


>UniRef50_Q81W00 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=17; Firmicutes|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Bacillus anthracis
          Length = 292

 Score = 51.6 bits (118), Expect = 2e-05
 Identities = 26/77 (33%), Positives = 44/77 (57%)
 Frame = +2

Query: 266 KDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAP 445
           KD+++ Y     + L QNFL++  ++++IV  +         E+GPG G +T  + ++A 
Sbjct: 11  KDIVEKYGFSFKKSLGQNFLIDTNVLNRIVDHAEIGSESGAIEIGPGIGALTEQLAKRA- 69

Query: 446 KKLVLIEKDPRFLPSLE 496
           KK+V  E D R LP L+
Sbjct: 70  KKVVAFEIDQRLLPILD 86


>UniRef50_Q3ZZE6 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=3; Dehalococcoides|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Dehalococcoides sp. (strain
           CBDB1)
          Length = 291

 Score = 51.2 bits (117), Expect = 2e-05
 Identities = 28/86 (32%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
 Frame = +2

Query: 248 ASIPSI----KDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGG 415
           AS PS+    K++++ Y L+A + L Q+FL+   +++KI+ A+      TV EVGPG G 
Sbjct: 10  ASAPSLMAQAKEMMEGYTLKARKGLGQHFLISQGVLNKILAAADLKPTDTVIEVGPGLGA 69

Query: 416 ITRSIIRQAPKKLVLIEKDPRFLPSL 493
           +T  ++++A  +++ +E D + + +L
Sbjct: 70  LTEELLKRA-GQVIAVELDDKLIDAL 94


>UniRef50_Q98RJ3 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=1; Mycoplasma pulmonis|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Mycoplasma pulmonis
          Length = 252

 Score = 50.8 bits (116), Expect = 3e-05
 Identities = 23/62 (37%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
 Frame = +2

Query: 290 LRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVL-IE 466
           +RA +   QNFL++  +I+KIV +S  ++N  + E+GPG G +T+ ++++A K L   I+
Sbjct: 1   MRAKKRFGQNFLIDQNIINKIVDSS-EVENRNIIEIGPGKGALTKILVKKANKVLAYEID 59

Query: 467 KD 472
           +D
Sbjct: 60  QD 61


>UniRef50_Q3A8X5 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=1; Carboxydothermus
           hydrogenoformans Z-2901|Rep: Dimethyladenosine
           transferase (EC 2.1.1.-) (S-adenosylmethionine-6-N',
           N'-adenosyl(rRNA) dimethyltransferase) -
           Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
           6008)
          Length = 291

 Score = 50.8 bits (116), Expect = 3e-05
 Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
 Frame = +2

Query: 260 SIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQ 439
           ++K+++  + L     L Q+FL +  ++ KIV  +   ++  V E+GPG G +TR ++ Q
Sbjct: 8   TLKEILARHNLTLSHGLGQHFLTDFGILAKIVEKAEITKDDAVLEIGPGAGVLTR-LLAQ 66

Query: 440 APKKLVLIEKDPRFLPSL-ELLADL 511
           A K +V IE D + LP L E   DL
Sbjct: 67  AAKYVVAIEIDKKLLPVLAETTGDL 91


>UniRef50_Q4RYG8 Cluster: Chromosome 2 SCAF14976, whole genome
           shotgun sequence; n=3; Clupeocephala|Rep: Chromosome 2
           SCAF14976, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 92

 Score = 50.4 bits (115), Expect = 4e-05
 Identities = 26/67 (38%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
 Frame = +1

Query: 1   LKQAEIAYMKLIE-ERNRERVQKLQVISKRNRLTGFTIGAGVLGVYLYSIFAIKQETFLD 177
           L   ++ Y++ IE E+ +++ QKL+    RN +TG  IGA VLG+Y Y+ +++ QE  +D
Sbjct: 24  LSPEQLHYIRQIELEQWKKKTQKLRT---RNVVTGLAIGALVLGIYGYTFYSVSQERIMD 80

Query: 178 DFDEPPK 198
           + DE  K
Sbjct: 81  EMDEEAK 87


>UniRef50_Q8XHG8 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=11; Clostridium|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Clostridium perfringens
          Length = 285

 Score = 50.4 bits (115), Expect = 4e-05
 Identities = 25/76 (32%), Positives = 45/76 (59%)
 Frame = +2

Query: 266 KDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAP 445
           K++++ Y  R  + L QNFL++  +   IV  +   ++  V E+GPG G +T  ++++A 
Sbjct: 12  KELVQKYNFRFSKSLGQNFLIDDSVPRDIVNGADVCEDDLVIEIGPGVGTLTVQLLKRA- 70

Query: 446 KKLVLIEKDPRFLPSL 493
           K++V IE D   +P L
Sbjct: 71  KRVVAIELDSSLIPIL 86


>UniRef50_Q30ZP0 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=3; Desulfovibrio|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Desulfovibrio desulfuricans
           (strain G20)
          Length = 280

 Score = 50.0 bits (114), Expect = 6e-05
 Identities = 27/60 (45%), Positives = 34/60 (56%)
 Frame = +2

Query: 293 RALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKD 472
           RA + L QNFL +  +  KIV A        V E+GPGPG +T  I + AP  L L+EKD
Sbjct: 19  RAKKSLGQNFLQDKNISAKIVAALQIGPADCVIEIGPGPGALTDFIQKAAPASLWLLEKD 78


>UniRef50_Q9RU68 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=3; Deinococcus|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Deinococcus radiodurans
          Length = 292

 Score = 50.0 bits (114), Expect = 6e-05
 Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
 Frame = +2

Query: 263 IKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQA 442
           ++ ++  + L+  + L QNFL++  ++  I  A G      V E+GPG G +TR +  + 
Sbjct: 28  VRALLAAHGLKPTKSLGQNFLIDGNILRAIAEAGGAAPGENVLEIGPGLGVLTREVASRG 87

Query: 443 PKKLVLIEKDPRFLPSL-ELLADL 511
             ++  +EKD R  P L E LA L
Sbjct: 88  -ARVTALEKDERLRPVLAETLAGL 110


>UniRef50_A4M7V1 Cluster: Dimethyladenosine transferase; n=1;
           Petrotoga mobilis SJ95|Rep: Dimethyladenosine
           transferase - Petrotoga mobilis SJ95
          Length = 275

 Score = 49.2 bits (112), Expect = 1e-04
 Identities = 27/74 (36%), Positives = 41/74 (55%)
 Frame = +2

Query: 275 IKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKL 454
           +K Y +R  + L QNFL    +  +IV+ S   +N  + E+G G G +T  I ++A KK+
Sbjct: 7   LKKYDIRLKKGLGQNFLSNSTVSHEIVKKSEIDENDVIIEIGTGNGILTEEIAKKA-KKV 65

Query: 455 VLIEKDPRFLPSLE 496
           +  E D R  P LE
Sbjct: 66  ITFEIDERLKPLLE 79


>UniRef50_A0V2P8 Cluster: Dimethyladenosine transferase; n=3;
           Clostridium|Rep: Dimethyladenosine transferase -
           Clostridium cellulolyticum H10
          Length = 290

 Score = 49.2 bits (112), Expect = 1e-04
 Identities = 25/75 (33%), Positives = 45/75 (60%)
 Frame = +2

Query: 269 DVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPK 448
           ++IK ++L+  + L QNFL +  ++ +IV AS   ++    E+GPG G +TR +  ++  
Sbjct: 8   EIIKKHRLKLTKALGQNFLTDFSVVKRIVDASDIDKDTLAIEIGPGVGSMTRELAARS-A 66

Query: 449 KLVLIEKDPRFLPSL 493
            +  IE D R +P+L
Sbjct: 67  GVAAIEIDKRLIPAL 81


>UniRef50_Q67JB9 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=4; Firmicutes|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Symbiobacterium thermophilum
          Length = 285

 Score = 49.2 bits (112), Expect = 1e-04
 Identities = 26/71 (36%), Positives = 43/71 (60%)
 Frame = +2

Query: 260 SIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQ 439
           ++K ++  Y LR    L QNFL++ R++D IV A+G      V E+GPG G +T+ +  +
Sbjct: 8   ALKALMAQYGLRPQHRLGQNFLIDGRVLDGIVSAAGLEPTDVVLEIGPGLGTLTQRLAAK 67

Query: 440 APKKLVLIEKD 472
           A  ++V +E D
Sbjct: 68  A-GRVVCVELD 77


>UniRef50_Q8RDC8 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=3; Thermoanaerobacter|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Thermoanaerobacter tengcongensis
          Length = 268

 Score = 48.8 bits (111), Expect = 1e-04
 Identities = 25/61 (40%), Positives = 38/61 (62%)
 Frame = +2

Query: 290 LRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEK 469
           ++A ++  QNF+ +  L+ KIVRASG  +   V EVG G GG+T  + ++  KK+V  E 
Sbjct: 1   MKAKKKWGQNFIFDKNLLSKIVRASGVGEEDFVLEVGTGHGGLTEELAKKV-KKVVSFEI 59

Query: 470 D 472
           D
Sbjct: 60  D 60


>UniRef50_Q03VR7 Cluster: Dimethyladenosine transferase; n=1;
           Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293|Rep: Dimethyladenosine transferase - Leuconostoc
           mesenteroides subsp. mesenteroides (strain ATCC 8293
           /NCDO 523)
          Length = 295

 Score = 48.4 bits (110), Expect = 2e-04
 Identities = 28/82 (34%), Positives = 46/82 (56%)
 Frame = +2

Query: 272 VIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKK 451
           ++  Y LRA ++  QNFL +  ++  IV A+       V E+GPG G +T  + R A KK
Sbjct: 16  ILNEYGLRAKKKFGQNFLTDLNVLHNIVEAAEITAEDYVIEIGPGIGALTEQLARSA-KK 74

Query: 452 LVLIEKDPRFLPSLELLADLVE 517
           ++  E D +    +E+LAD ++
Sbjct: 75  VLAFEIDSQM---VEVLADTLK 93


>UniRef50_A0LA32 Cluster: Dimethyladenosine transferase; n=1;
           Magnetococcus sp. MC-1|Rep: Dimethyladenosine
           transferase - Magnetococcus sp. (strain MC-1)
          Length = 279

 Score = 48.4 bits (110), Expect = 2e-04
 Identities = 26/81 (32%), Positives = 46/81 (56%)
 Frame = +2

Query: 263 IKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQA 442
           IK +++ + L   +   QNFL++P +  +IV  +G      V E+GPG G +T  ++++A
Sbjct: 7   IKLLLEQHGLSPNKRFGQNFLVDPSVAPRIVALAGIKAGDRVLEIGPGVGSLTIPLLQKA 66

Query: 443 PKKLVLIEKDPRFLPSLELLA 505
              +  +EKD + LP L + A
Sbjct: 67  -GAVTAVEKDRKLLPLLRVEA 86


>UniRef50_Q72GC7 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=2; Thermus thermophilus|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Thermus thermophilus (strain HB27
           / ATCC BAA-163 / DSM 7039)
          Length = 271

 Score = 48.4 bits (110), Expect = 2e-04
 Identities = 31/85 (36%), Positives = 49/85 (57%)
 Frame = +2

Query: 242 KAASIPSIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGIT 421
           K AS  S++ +++ + L A +   QNFL+    + +IV A+       V EVGPG G +T
Sbjct: 3   KLASPQSVRALLERHGLFADKRFGQNFLVSEVHLRRIVEAARPFTG-PVFEVGPGLGALT 61

Query: 422 RSIIRQAPKKLVLIEKDPRFLPSLE 496
           R+++ +A  ++  IEKD R  P LE
Sbjct: 62  RALL-EAGAEVTAIEKDLRLRPVLE 85


>UniRef50_Q88Z93 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=5; Lactobacillales|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Lactobacillus plantarum
          Length = 296

 Score = 48.4 bits (110), Expect = 2e-04
 Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
 Frame = +2

Query: 272 VIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKK 451
           ++  Y L+  + L QNFL +  ++  IV  +    N  V E+GPG G +T  + R A   
Sbjct: 17  IMHTYGLQVKKSLGQNFLTDQNVLHNIVATADIGTNDNVIEIGPGIGALTEYLAR-AAHH 75

Query: 452 LVLIEKDPRFLPSL-ELLAD 508
           ++  E D R LP L E LAD
Sbjct: 76  VLAFEIDDRLLPILDETLAD 95


>UniRef50_Q4JU23 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=1; Corynebacterium jeikeium
           K411|Rep: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Corynebacterium jeikeium (strain
           K411)
          Length = 316

 Score = 48.4 bits (110), Expect = 2e-04
 Identities = 24/77 (31%), Positives = 43/77 (55%)
 Frame = +2

Query: 263 IKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQA 442
           I+ + +   L   ++L QNF+ +P  + KIV+A+    +  V E+GPG G +T +++ +A
Sbjct: 15  IRQLAEELDLNPTKKLGQNFVHDPNTVRKIVKAADVTADDNVVEIGPGLGSLTLALL-EA 73

Query: 443 PKKLVLIEKDPRFLPSL 493
              +  +E DPR    L
Sbjct: 74  GASVTAVEIDPRLAAKL 90


>UniRef50_A5VI09 Cluster: Dimethyladenosine transferase; n=2;
           Lactobacillus reuteri|Rep: Dimethyladenosine transferase
           - Lactobacillus reuteri F275
          Length = 297

 Score = 48.0 bits (109), Expect = 2e-04
 Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
 Frame = +2

Query: 272 VIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKK 451
           +++ Y +R  +   QNFL +  ++  IV A+    N  V E+GPG G +T   + QA  +
Sbjct: 16  IMEKYGIRTKKSFGQNFLTDLNVLKNIVEAADITANDNVIEIGPGIGALTEQ-LAQAAGE 74

Query: 452 LVLIEKDPRFLPSL-ELLADLVEIK 523
           ++ +E D   +P L E+L+   ++K
Sbjct: 75  VLALEIDQDLIPVLKEVLSPYDDVK 99


>UniRef50_Q20033 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 133

 Score = 48.0 bits (109), Expect = 2e-04
 Identities = 20/63 (31%), Positives = 42/63 (66%)
 Frame = +1

Query: 1   LKQAEIAYMKLIEERNRERVQKLQVISKRNRLTGFTIGAGVLGVYLYSIFAIKQETFLDD 180
           L + +  + K  E+ N+ERV+++   + +N ++   +   V+G+Y Y+++++KQETFL++
Sbjct: 55  LPRPQKRFAKQFEKVNQERVKEIFAKNYKNHISFAVLLGVVIGIYWYTMYSVKQETFLEE 114

Query: 181 FDE 189
            DE
Sbjct: 115 IDE 117


>UniRef50_Q8PU18 Cluster: Probable dimethyladenosine transferase (EC
           2.1.1.-) (S- adenosylmethionine-6-N',N'-adenosyl(rRNA)
           dimethyltransferase); n=5; Methanosarcinaceae|Rep:
           Probable dimethyladenosine transferase (EC 2.1.1.-) (S-
           adenosylmethionine-6-N',N'-adenosyl(rRNA)
           dimethyltransferase) - Methanosarcina mazei
           (Methanosarcina frisia)
          Length = 271

 Score = 48.0 bits (109), Expect = 2e-04
 Identities = 26/85 (30%), Positives = 46/85 (54%)
 Frame = +2

Query: 263 IKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQA 442
           ++ ++K Y ++      Q+FL++   +D+IV A+      TV E+G G G +T  + R+A
Sbjct: 2   VRSILKKYNIKG-GTFDQHFLIDAGYLDRIVAAAELSPQDTVLEIGAGIGNLTERLARRA 60

Query: 443 PKKLVLIEKDPRFLPSLELLADLVE 517
            KK++ +E DP  +  L    D  E
Sbjct: 61  -KKVIAVELDPALVSVLHDRFDAAE 84


>UniRef50_Q8KE87 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=11; Chlorobiaceae|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Chlorobium tepidum
          Length = 275

 Score = 47.6 bits (108), Expect = 3e-04
 Identities = 25/61 (40%), Positives = 36/61 (59%)
 Frame = +2

Query: 290 LRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEK 469
           + A ++L QNFL++  +  KIVR SG  +   V E+GPG G +T +I+   P     IEK
Sbjct: 11  IAAKKKLGQNFLLDRNIPRKIVRESGIKEGDRVVEIGPGFGALTTAILEVMP-SFTAIEK 69

Query: 470 D 472
           D
Sbjct: 70  D 70


>UniRef50_Q1ILA1 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=1; Acidobacteria bacterium
           Ellin345|Rep: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Acidobacteria bacterium (strain
           Ellin345)
          Length = 285

 Score = 47.6 bits (108), Expect = 3e-04
 Identities = 27/65 (41%), Positives = 38/65 (58%)
 Frame = +2

Query: 305 ELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPRFL 484
           +L QNFL +     KIV A G+I + TV E+GPG G IT  + ++A K+L+ +E D    
Sbjct: 17  KLGQNFLSDASGALKIVEALGDISDATVVEIGPGRGAITDHLAKRA-KRLIAVEIDRVLA 75

Query: 485 PSLEL 499
             L L
Sbjct: 76  AQLRL 80


>UniRef50_Q14IY7 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=11; Francisella tularensis|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Francisella tularensis subsp.
           tularensis (strain FSC 198)
          Length = 262

 Score = 47.2 bits (107), Expect = 4e-04
 Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
 Frame = +2

Query: 284 YKLRALRELSQNFLMEPRLIDKIVRASGNIQNHT-VCEVGPGPGGITRSIIRQAPKKLVL 460
           YK +A + L QNFL +  +I KIV+ + NI+ H  V E+GPG G +TR ++  +   + +
Sbjct: 3   YKTKAKKSLGQNFLQDENIIRKIVQLA-NIKKHDIVVEIGPGLGALTRYLL-SSSNNVSV 60

Query: 461 IEKDPRFLPSL 493
           +E D   + +L
Sbjct: 61  VEFDASVIDTL 71


>UniRef50_Q2NE42 Cluster: Probable dimethyladenosine transferase (EC
           2.1.1.-) (S- adenosylmethionine-6-N',N'-adenosyl(rRNA)
           dimethyltransferase); n=1; Methanosphaera stadtmanae DSM
           3091|Rep: Probable dimethyladenosine transferase (EC
           2.1.1.-) (S- adenosylmethionine-6-N',N'-adenosyl(rRNA)
           dimethyltransferase) - Methanosphaera stadtmanae (strain
           DSM 3091)
          Length = 271

 Score = 46.8 bits (106), Expect = 5e-04
 Identities = 22/70 (31%), Positives = 43/70 (61%)
 Frame = +2

Query: 266 KDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAP 445
           K++++ Y ++     SQN+L++   ++ I+  +    N T+ E+G G G +T  + ++A 
Sbjct: 5   KEILEKYNIKLDTNKSQNYLIDDNKLNIILENADIQDNETILEIGAGIGTLTLPMAKKA- 63

Query: 446 KKLVLIEKDP 475
           KK++ IEKDP
Sbjct: 64  KKVIAIEKDP 73


>UniRef50_Q8YAE2 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=73; Bacilli|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Listeria monocytogenes
          Length = 295

 Score = 46.8 bits (106), Expect = 5e-04
 Identities = 23/76 (30%), Positives = 41/76 (53%)
 Frame = +2

Query: 269 DVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPK 448
           +++K Y     + L QNFL++  ++ +I   +   +   V E+GPG G +T  + + A  
Sbjct: 13  EILKKYGFLFKKSLGQNFLIDSNILTRITDTAEITKETNVIEIGPGIGALTEQLAKTA-N 71

Query: 449 KLVLIEKDPRFLPSLE 496
           ++V  E D R LP L+
Sbjct: 72  EVVAFEIDQRLLPILD 87


>UniRef50_Q8TWU7 Cluster: Probable dimethyladenosine transferase (EC
           2.1.1.-) (S- adenosylmethionine-6-N',N'-adenosyl(rRNA)
           dimethyltransferase); n=1; Methanopyrus kandleri|Rep:
           Probable dimethyladenosine transferase (EC 2.1.1.-) (S-
           adenosylmethionine-6-N',N'-adenosyl(rRNA)
           dimethyltransferase) - Methanopyrus kandleri
          Length = 278

 Score = 46.4 bits (105), Expect = 7e-04
 Identities = 22/71 (30%), Positives = 45/71 (63%)
 Frame = +2

Query: 284 YKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLI 463
           Y +R  R L Q+F+++  +++ +V A+   ++  V E+GPGPG +TR ++ +A  +++ +
Sbjct: 14  YGIRPRRRLGQHFMVDDNILEFMVEAAEVREDDIVLEIGPGPGLLTRYLMTRA-GQVIAV 72

Query: 464 EKDPRFLPSLE 496
           E D R +  L+
Sbjct: 73  ELDGRMVEILK 83


>UniRef50_UPI0000E47266 Cluster: PREDICTED: similar to CG7319-PC;
           n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
           similar to CG7319-PC - Strongylocentrotus purpuratus
          Length = 98

 Score = 46.0 bits (104), Expect = 0.001
 Identities = 19/39 (48%), Positives = 25/39 (64%)
 Frame = +1

Query: 82  KRNRLTGFTIGAGVLGVYLYSIFAIKQETFLDDFDEPPK 198
           KRN      +GA  L VY YSI+++ QE+FL+D D P K
Sbjct: 58  KRNSWMALALGASALSVYAYSIYSVSQESFLEDLDTPNK 96


>UniRef50_A5CWN2 Cluster: Dimethyladenosine transferase; n=2;
           sulfur-oxidizing symbionts|Rep: Dimethyladenosine
           transferase - Vesicomyosocius okutanii subsp.
           Calyptogena okutanii (strain HA)
          Length = 254

 Score = 45.6 bits (103), Expect = 0.001
 Identities = 24/70 (34%), Positives = 39/70 (55%)
 Frame = +2

Query: 293 RALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKD 472
           +A +   QNFL++ R+ID+I+      +N  + E+GPG G IT  ++     +L +IE D
Sbjct: 7   KARKRFGQNFLIDNRIIDRIIATISPKRNDNLLEIGPGQGAITIPLLNYV-NQLNVIEID 65

Query: 473 PRFLPSLELL 502
              +  LE L
Sbjct: 66  LNLISILESL 75


>UniRef50_A4E9N6 Cluster: Putative uncharacterized protein; n=1;
           Collinsella aerofaciens ATCC 25986|Rep: Putative
           uncharacterized protein - Collinsella aerofaciens ATCC
           25986
          Length = 286

 Score = 45.6 bits (103), Expect = 0.001
 Identities = 25/87 (28%), Positives = 48/87 (55%)
 Frame = +2

Query: 236 TDKAASIPSIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGG 415
           T   A+  + +++++ + L     L QNFL++  +I++I   +    +  V EVGPG G 
Sbjct: 3   TSPLANPTATRELLEEFGLATKHRLGQNFLIDNHVIERICELAELAGDERVLEVGPGCGT 62

Query: 416 ITRSIIRQAPKKLVLIEKDPRFLPSLE 496
           +T +++++A   +  IE DP   P L+
Sbjct: 63  LTLALLQEA-ACVTSIEADPELEPVLD 88


>UniRef50_A3DML9 Cluster: Ribosomal RNA adenine methylase
           transferase; n=1; Staphylothermus marinus F1|Rep:
           Ribosomal RNA adenine methylase transferase -
           Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
           F1)
          Length = 268

 Score = 45.6 bits (103), Expect = 0.001
 Identities = 23/70 (32%), Positives = 43/70 (61%)
 Frame = +2

Query: 269 DVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPK 448
           ++++ + +R  ++LSQNF++ PR+I   ++    + N T+ E+G G G ++  + R+A K
Sbjct: 18  NLLRKHGIRPRKKLSQNFIVNPRIIHDFLKHV--LPNKTLLEIGAGIGSLSYYLSRKASK 75

Query: 449 KLVLIEKDPR 478
             V IE D R
Sbjct: 76  YSVFIEIDER 85


>UniRef50_Q6KH80 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=1; Mycoplasma mobile|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Mycoplasma mobile
          Length = 254

 Score = 45.6 bits (103), Expect = 0.001
 Identities = 22/65 (33%), Positives = 39/65 (60%)
 Frame = +2

Query: 302 RELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPRF 481
           + L QNFL +  +I+KIV     ++N  V E+GPG G +T  +++++ K ++  E D   
Sbjct: 7   KSLGQNFLQDKNIIEKIVNFIP-LENEDVLEIGPGQGALTNLLVKKS-KNVLAYEIDKEL 64

Query: 482 LPSLE 496
           +P L+
Sbjct: 65  IPFLK 69


>UniRef50_A6NV94 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides capillosus ATCC 29799|Rep: Putative
           uncharacterized protein - Bacteroides capillosus ATCC
           29799
          Length = 290

 Score = 45.2 bits (102), Expect = 0.002
 Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
 Frame = +2

Query: 251 SIPSIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSI 430
           ++  IK ++  +  R  + + QNFL+E  +   I  ASG  ++  V E+GPG G +T  +
Sbjct: 5   NVNDIKALLGRHGFRFSKSMGQNFLIEDHVPRDIAAASGADKDCGVLEIGPGIGPLTVRL 64

Query: 431 IRQAPKKLVLIEKDPRFLPSL-ELLA--DLVEI 520
             +A  ++V +E D   LP L E LA  D VEI
Sbjct: 65  AERA-GRVVSVELDKALLPVLAETLAGRDNVEI 96


>UniRef50_A4RFU0 Cluster: Putative uncharacterized protein; n=1;
           Magnaporthe grisea|Rep: Putative uncharacterized protein
           - Magnaporthe grisea (Rice blast fungus) (Pyricularia
           grisea)
          Length = 364

 Score = 45.2 bits (102), Expect = 0.002
 Identities = 34/105 (32%), Positives = 54/105 (51%)
 Frame = +2

Query: 164 RRSLTISTSPRKYSSNHGRR*NCITDKAASIPSIKDVIKLYKLRALRELSQNFLMEPRLI 343
           RR+   S+SP  Y    G   N     AA+ P+  +V +  K     +  Q+ L  P + 
Sbjct: 8   RRAGAASSSP--YDRKGG---NNAAAAAAAAPTKNNVFRFKK-----DYGQHILKNPGIA 57

Query: 344 DKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPR 478
           ++IV+ +      TV EVGPG G ++  I+ +A +KL+ +E DPR
Sbjct: 58  EEIVKKAYLRPTDTVLEVGPGTGNLSVKILERA-QKLIAVELDPR 101


>UniRef50_UPI0000F1DBDD Cluster: PREDICTED: similar to MGC84009
           protein; n=2; Danio rerio|Rep: PREDICTED: similar to
           MGC84009 protein - Danio rerio
          Length = 93

 Score = 44.8 bits (101), Expect = 0.002
 Identities = 18/41 (43%), Positives = 29/41 (70%)
 Frame = +1

Query: 76  ISKRNRLTGFTIGAGVLGVYLYSIFAIKQETFLDDFDEPPK 198
           + + N +TG TIGA V+G++ Y+I ++KQE  +D+ DE  K
Sbjct: 40  VRRCNLITGLTIGAFVVGLFSYTILSVKQEKIIDEIDEEAK 80


>UniRef50_Q0W2E6 Cluster: Putative dimethyladenosine rRNA
           methyltransferase; n=1; uncultured methanogenic archaeon
           RC-I|Rep: Putative dimethyladenosine rRNA
           methyltransferase - Uncultured methanogenic archaeon
           RC-I
          Length = 260

 Score = 44.8 bits (101), Expect = 0.002
 Identities = 22/61 (36%), Positives = 37/61 (60%)
 Frame = +2

Query: 314 QNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPRFLPSL 493
           Q+FL++  ++ +IV A+    +  V E+G GPG +TR ++ Q  + +  IE D RF  +L
Sbjct: 11  QHFLIDQAVLHRIVDAAALSSDEVVLEIGAGPGNLTR-LLAQKARHVYTIEMDRRFAEAL 69

Query: 494 E 496
           E
Sbjct: 70  E 70


>UniRef50_A5UN01 Cluster: Dimethyladenosine transferase, KsgA; n=1;
           Methanobrevibacter smithii ATCC 35061|Rep:
           Dimethyladenosine transferase, KsgA - Methanobrevibacter
           smithii (strain PS / ATCC 35061 / DSM 861)
          Length = 303

 Score = 44.8 bits (101), Expect = 0.002
 Identities = 22/77 (28%), Positives = 43/77 (55%)
 Frame = +2

Query: 266 KDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAP 445
           K ++  Y ++  + L QN+L++    D+I++     ++  V E+GPG G +T  + ++  
Sbjct: 15  KAILNEYGIKLNKNLGQNYLIDRNKRDQIIQFGNLTKDDVVLEIGPGIGTLTIELAKRV- 73

Query: 446 KKLVLIEKDPRFLPSLE 496
           KK++ IE+D      LE
Sbjct: 74  KKVIAIEQDSNICQILE 90


>UniRef50_Q8EU92 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=1; Mycoplasma penetrans|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Mycoplasma penetrans
          Length = 272

 Score = 44.8 bits (101), Expect = 0.002
 Identities = 26/74 (35%), Positives = 41/74 (55%)
 Frame = +2

Query: 275 IKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKL 454
           IK  K  A R++ QNFL+   +  KIV +     +  V E+GPG G +T+ ++ Q  K L
Sbjct: 13  IKKNKFFASRKMGQNFLINENIKKKIVDSLEIKPDDHVLEIGPGFGALTKIVLSQT-KNL 71

Query: 455 VLIEKDPRFLPSLE 496
            ++E D R +  L+
Sbjct: 72  TVVELDKRLVEFLK 85


>UniRef50_Q1MR01 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=1; Lawsonia intracellularis
           PHE/MN1-00|Rep: Dimethyladenosine transferase (EC
           2.1.1.-) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Lawsonia intracellularis (strain
           PHE/MN1-00)
          Length = 271

 Score = 44.8 bits (101), Expect = 0.002
 Identities = 21/60 (35%), Positives = 34/60 (56%)
 Frame = +2

Query: 293 RALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKD 472
           R  + L Q+FL +  +  +IV+     +   + E+GPG G +TR I    P +L+L+EKD
Sbjct: 6   RPKKSLGQHFLKDTAIAYRIVKLLDIHEGENIFEIGPGQGALTRHIYGYNPGQLLLVEKD 65


>UniRef50_Q14QK5 Cluster: Putative dimethyladenosine transferase
           protein; n=1; Spiroplasma citri|Rep: Putative
           dimethyladenosine transferase protein - Spiroplasma
           citri
          Length = 282

 Score = 44.4 bits (100), Expect = 0.003
 Identities = 24/62 (38%), Positives = 36/62 (58%)
 Frame = +2

Query: 314 QNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPRFLPSL 493
           QNFL     I+ IV ++ ++ N  + E+GPG G +T SI+ +A  KLV +E D   +  L
Sbjct: 21  QNFLTNTHFINLIVDSAFDLPNTNILEIGPGMGALTSSILLKA-NKLVCVEIDSTLVEYL 79

Query: 494 EL 499
            L
Sbjct: 80  TL 81


>UniRef50_A7B6D9 Cluster: Putative uncharacterized protein; n=1;
           Ruminococcus gnavus ATCC 29149|Rep: Putative
           uncharacterized protein - Ruminococcus gnavus ATCC 29149
          Length = 307

 Score = 44.4 bits (100), Expect = 0.003
 Identities = 23/75 (30%), Positives = 43/75 (57%)
 Frame = +2

Query: 272 VIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKK 451
           V++ Y     ++  QNFL++  ++DKI+ ++   ++  V E+GPG G +T+  +  A  K
Sbjct: 31  VLQKYNFVFQKKFGQNFLIDTHVLDKIIGSAEITKDDFVLEIGPGIGTMTQ-YLACAAGK 89

Query: 452 LVLIEKDPRFLPSLE 496
           +  +E D   +P LE
Sbjct: 90  VAAVEIDKALIPILE 104


>UniRef50_A5UPY4 Cluster: Dimethyladenosine transferase; n=4;
           Chloroflexaceae|Rep: Dimethyladenosine transferase -
           Roseiflexus sp. RS-1
          Length = 297

 Score = 44.4 bits (100), Expect = 0.003
 Identities = 25/68 (36%), Positives = 39/68 (57%)
 Frame = +2

Query: 290 LRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEK 469
           LR  R + QNFL++   +  IV A+    + TV EVGPG G +T  ++++A + +V +E 
Sbjct: 22  LRPSRSMGQNFLIDGAALATIVTAAALTADDTVVEVGPGLGVLTWELVQRA-RTVVAVEL 80

Query: 470 DPRFLPSL 493
           D R    L
Sbjct: 81  DRRLAERL 88


>UniRef50_Q8KA00 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=3; Buchnera aphidicola|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Buchnera aphidicola subsp.
           Schizaphis graminum
          Length = 274

 Score = 44.4 bits (100), Expect = 0.003
 Identities = 27/73 (36%), Positives = 39/73 (53%)
 Frame = +2

Query: 278 KLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLV 457
           K+ K   L+  SQNFL+   LI KIV+        T+ E+GPG G +T+ I      +L+
Sbjct: 4   KIKKHLPLKRFSQNFLINQNLIKKIVKFINPQLKQTLVEIGPGLGALTKPIC-NIVDELI 62

Query: 458 LIEKDPRFLPSLE 496
           +IE D   L  L+
Sbjct: 63  VIEIDLNLLNFLK 75


>UniRef50_Q6GM33 Cluster: MGC84009 protein; n=2; Xenopus|Rep:
           MGC84009 protein - Xenopus laevis (African clawed frog)
          Length = 100

 Score = 44.0 bits (99), Expect = 0.004
 Identities = 19/45 (42%), Positives = 29/45 (64%)
 Frame = +1

Query: 85  RNRLTGFTIGAGVLGVYLYSIFAIKQETFLDDFDEPPKIQQ*SWP 219
           RN +TG  IG  VLG+Y Y+ +++ QE FLD+ +   K  + S+P
Sbjct: 51  RNLVTGLVIGGIVLGIYGYTFYSVAQEKFLDELEVDAKAARASYP 95


>UniRef50_Q9FK02 Cluster: Dimethyladenosine transferase-like
           protein; n=8; Magnoliophyta|Rep: Dimethyladenosine
           transferase-like protein - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 380

 Score = 44.0 bits (99), Expect = 0.004
 Identities = 22/60 (36%), Positives = 35/60 (58%)
 Frame = +2

Query: 314 QNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPRFLPSL 493
           Q+ L   R++D IVR+S      TV E+GPG G +T  ++ +A + +V +E D R +  L
Sbjct: 69  QHLLTNTRILDSIVRSSDIRPTDTVLEIGPGTGNLTMKLL-EAAQNVVAVELDKRMVEIL 127


>UniRef50_Q8L867 Cluster: Dimethyladenosine transferase-like
           protein; n=1; Arabidopsis thaliana|Rep:
           Dimethyladenosine transferase-like protein - Arabidopsis
           thaliana (Mouse-ear cress)
          Length = 352

 Score = 44.0 bits (99), Expect = 0.004
 Identities = 22/60 (36%), Positives = 35/60 (58%)
 Frame = +2

Query: 314 QNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPRFLPSL 493
           Q+ L   R++D IVR+S      TV E+GPG G +T  ++ +A + +V +E D R +  L
Sbjct: 69  QHLLTNTRILDSIVRSSDIRPTDTVLEIGPGTGNLTMKLL-EAAQNVVAVELDKRMVEIL 127


>UniRef50_Q4N282 Cluster: Dimethyladenosine transferase, putative;
           n=3; Piroplasmida|Rep: Dimethyladenosine transferase,
           putative - Theileria parva
          Length = 388

 Score = 44.0 bits (99), Expect = 0.004
 Identities = 22/66 (33%), Positives = 39/66 (59%)
 Frame = +2

Query: 299 LRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPR 478
           +++  Q+ L  P ++DKI++A+      TV E+GPG G  T  ++  A KK+V I+ D R
Sbjct: 71  VKKYGQHMLKNPGVLDKIIKAAEIRPTDTVLEIGPGTGNWTVRLVTLA-KKVVAIDVDAR 129

Query: 479 FLPSLE 496
            +  ++
Sbjct: 130 MISEVK 135


>UniRef50_Q74C12 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=8; Desulfuromonadales|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Geobacter sulfurreducens
          Length = 276

 Score = 44.0 bits (99), Expect = 0.004
 Identities = 23/68 (33%), Positives = 36/68 (52%)
 Frame = +2

Query: 290 LRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEK 469
           +RA + L QNFL +  ++ +I           + E+GPG G +T  +  QA  +LV +E 
Sbjct: 6   IRARKALGQNFLTDRSVLSRIAALVSAGAGERILEIGPGKGALTSYLAEQA-GQLVAVEL 64

Query: 470 DPRFLPSL 493
           D R +P L
Sbjct: 65  DDRLVPLL 72


>UniRef50_Q251W8 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=2; Desulfitobacterium
           hafniense|Rep: Dimethyladenosine transferase (EC
           2.1.1.-) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Desulfitobacterium hafniense
           (strain Y51)
          Length = 278

 Score = 44.0 bits (99), Expect = 0.004
 Identities = 24/60 (40%), Positives = 36/60 (60%)
 Frame = +2

Query: 293 RALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKD 472
           +A + L QNFLM+ R+I+ I  AS       V E+GPG G +TR ++ Q  +K+  +E D
Sbjct: 17  KAHKSLGQNFLMDDRVIEAIAAASIKDPEIPVVEIGPGLGVLTR-VLAQKAQKVWAVELD 75


>UniRef50_Q7QT63 Cluster: GLP_13_6796_7746; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_13_6796_7746 - Giardia lamblia ATCC
           50803
          Length = 316

 Score = 43.6 bits (98), Expect = 0.005
 Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
 Frame = +2

Query: 302 RELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPRF 481
           ++  Q+ L  P +I  IV  +      TV E+GPG G +T +++ +A + ++ IE DPR 
Sbjct: 8   KQHGQHLLANPLVIKSIVEKAEIRSTDTVLEIGPGTGNLTLALLEKA-RHVIAIEIDPRM 66

Query: 482 LPSL-ELLADLVEIKSMLTL 538
           +  L + +A + E +   T+
Sbjct: 67  VSELKKRIAAIPEYRGKFTI 86


>UniRef50_Q87ST6 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=18; Gammaproteobacteria|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Vibrio parahaemolyticus
          Length = 269

 Score = 43.6 bits (98), Expect = 0.005
 Identities = 26/75 (34%), Positives = 36/75 (48%)
 Frame = +2

Query: 293 RALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKD 472
           +A +   QNFL +P +ID IV A        + E+GPG G IT  + R+   K  +IE D
Sbjct: 10  KARKRFGQNFLNDPYIIDGIVSAINPKPGQNLVEIGPGLGAITEPVGREV-DKFTVIELD 68

Query: 473 PRFLPSLELLADLVE 517
                 L    DL +
Sbjct: 69  RDLAERLRNHPDLAD 83


>UniRef50_P45439 Cluster: rRNA adenine N-6-methyltransferase; n=5;
           Actinomycetales|Rep: rRNA adenine N-6-methyltransferase
           - Streptomyces fradiae
          Length = 319

 Score = 43.6 bits (98), Expect = 0.005
 Identities = 26/67 (38%), Positives = 36/67 (53%)
 Frame = +2

Query: 293 RALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKD 472
           RA RELSQNFL    + +++ R         + EVG G G +T ++      +LV  E D
Sbjct: 58  RARRELSQNFLARRAVAERVARLVRPAPGGLLLEVGAGRGVLTEALAPYC-GRLVAHEID 116

Query: 473 PRFLPSL 493
           PR LP+L
Sbjct: 117 PRLLPAL 123


>UniRef50_A1I9H4 Cluster: Dimethyladenosine transferase; n=1;
           Candidatus Desulfococcus oleovorans Hxd3|Rep:
           Dimethyladenosine transferase - Candidatus Desulfococcus
           oleovorans Hxd3
          Length = 289

 Score = 43.2 bits (97), Expect = 0.006
 Identities = 26/79 (32%), Positives = 40/79 (50%)
 Frame = +2

Query: 260 SIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQ 439
           S + ++  + +   + L QNFL +P+  + IVR  G  +   V EVGPG G +T     Q
Sbjct: 3   SPRTILSGHDIAPKKSLGQNFLCDPQAAEMIVRKCGLSKADVVVEVGPGTGALTIPAAGQ 62

Query: 440 APKKLVLIEKDPRFLPSLE 496
           A   +  IE D R +  L+
Sbjct: 63  A-AWVYAIETDGRLIEPLK 80


>UniRef50_A7SNR6 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 368

 Score = 43.2 bits (97), Expect = 0.006
 Identities = 21/72 (29%), Positives = 39/72 (54%)
 Frame = +2

Query: 287 KLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIE 466
           K R+    +  ++ +  L +++ +   N+Q H V E  PGPG +TR++I    K+++ +E
Sbjct: 45  KPRSYTVKNYKYITDRDLAERVAKVL-NVQGHCVIEASPGPGMLTRAMIDSGAKQVIGLE 103

Query: 467 KDPRFLPSLELL 502
            D  F+  L  L
Sbjct: 104 PDKIFMEDLRSL 115


>UniRef50_Q6YPJ4 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=2; Candidatus Phytoplasma
           asteris|Rep: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Onion yellows phytoplasma
          Length = 268

 Score = 43.2 bits (97), Expect = 0.006
 Identities = 24/64 (37%), Positives = 37/64 (57%)
 Frame = +2

Query: 302 RELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPRF 481
           ++  QNFL +  L++KIV    +I +  V E+GPG G +T+ I+ QA K ++  E D   
Sbjct: 7   KKYGQNFLTDVNLLNKIV-TKASITDKNVLEIGPGKGALTKIIVPQA-KHVLAYEIDATL 64

Query: 482 LPSL 493
            P L
Sbjct: 65  KPFL 68


>UniRef50_Q7NC69 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=1; Mycoplasma gallisepticum|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Mycoplasma gallisepticum
          Length = 269

 Score = 43.2 bits (97), Expect = 0.006
 Identities = 23/80 (28%), Positives = 37/80 (46%)
 Frame = +2

Query: 254 IPSIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSII 433
           I  I    K  +    ++  QNFL++  +I+ +V A   I    V E+GPG G I+  +I
Sbjct: 3   INKINKFFKNNEFSPSKQRGQNFLIDQNIINNVVEAVSKINPSKVLEIGPGLGAISEQLI 62

Query: 434 RQAPKKLVLIEKDPRFLPSL 493
           ++       IE D +    L
Sbjct: 63  KRFADNYYAIELDKKLFHHL 82


>UniRef50_Q9USU2 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=5; Fungi/Metazoa group|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Schizosaccharomyces pombe
           (Fission yeast)
          Length = 307

 Score = 42.7 bits (96), Expect = 0.009
 Identities = 21/59 (35%), Positives = 35/59 (59%)
 Frame = +2

Query: 302 RELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPR 478
           ++  Q+ L  P +   IV  +   Q+ TV EVGPG G +T  ++ +A +K++ +E DPR
Sbjct: 26  KDFGQHILKNPLVAQGIVDKADLKQSDTVLEVGPGTGNLTVRMLEKA-RKVIAVEMDPR 83


>UniRef50_Q9ZGI6 Cluster: RRNA methyltransferase PikR1; n=1;
           Streptomyces venezuelae|Rep: RRNA methyltransferase
           PikR1 - Streptomyces venezuelae
          Length = 336

 Score = 42.3 bits (95), Expect = 0.011
 Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
 Frame = +2

Query: 302 RELSQNFLMEPRLIDKIV-RASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPR 478
           REL QNFL + R +  +V    G+ +N  V E+GPG G IT  ++R     + ++E DP 
Sbjct: 18  RELGQNFLQDDRAVRNLVTHVEGDGRN--VLEIGPGKGAITEELVRSF-DTVTVVEMDPH 74

Query: 479 F 481
           +
Sbjct: 75  W 75


>UniRef50_Q0EVS5 Cluster: Dimethyladenosine transferase; n=1;
           Mariprofundus ferrooxydans PV-1|Rep: Dimethyladenosine
           transferase - Mariprofundus ferrooxydans PV-1
          Length = 265

 Score = 42.3 bits (95), Expect = 0.011
 Identities = 24/62 (38%), Positives = 36/62 (58%)
 Frame = +2

Query: 296 ALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDP 475
           A + L Q+FLM+ + I +I  A  +     + E+GPGPG IT  ++ +A   L +IE D 
Sbjct: 16  AKKALGQHFLMDQQAIRRIAGAIDD--GADIIEIGPGPGAITEVLLARA-SHLTVIEMDD 72

Query: 476 RF 481
           RF
Sbjct: 73  RF 74


>UniRef50_Q1JDL6 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=18; Lactobacillales|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Streptococcus pyogenes serotype
           M12 (strain MGAS2096)
          Length = 298

 Score = 42.3 bits (95), Expect = 0.011
 Identities = 24/76 (31%), Positives = 38/76 (50%)
 Frame = +2

Query: 266 KDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAP 445
           K V+  +     +   QNFL +  ++ KIV  +   QN  V E+GPG G +T  +   A 
Sbjct: 18  KAVLDRHGFTFKKSFGQNFLTDTNILQKIVDTAEIDQNVNVIEIGPGIGALTEFLAENA- 76

Query: 446 KKLVLIEKDPRFLPSL 493
            +++  E D R +P L
Sbjct: 77  AEVMAFEIDDRLVPIL 92


>UniRef50_O59487 Cluster: Probable dimethyladenosine transferase (EC
           2.1.1.-) (S- adenosylmethionine-6-N',N'-adenosyl(rRNA)
           dimethyltransferase); n=5; Thermococcaceae|Rep: Probable
           dimethyladenosine transferase (EC 2.1.1.-) (S-
           adenosylmethionine-6-N',N'-adenosyl(rRNA)
           dimethyltransferase) - Pyrococcus horikoshii
          Length = 268

 Score = 42.3 bits (95), Expect = 0.011
 Identities = 22/75 (29%), Positives = 42/75 (56%)
 Frame = +2

Query: 272 VIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKK 451
           ++  Y +R    + Q+FL+   +I+K +  +   +N  + EVGPG G +T  + ++A KK
Sbjct: 8   LLSKYGIRPRDSIGQHFLIIEDVIEKAIETANVNENDVILEVGPGLGFLTDELAKRA-KK 66

Query: 452 LVLIEKDPRFLPSLE 496
           +  IE D + +  L+
Sbjct: 67  VYTIEIDQKIIEILK 81


>UniRef50_P66661 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=14; Corynebacterineae|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Mycobacterium bovis
          Length = 317

 Score = 42.3 bits (95), Expect = 0.011
 Identities = 23/78 (29%), Positives = 41/78 (52%)
 Frame = +2

Query: 263 IKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQA 442
           I+ + K    R  + L QNF+ +   + ++V ASG  ++  V EVGPG G +T +++ + 
Sbjct: 19  IRRLAKELDFRPRKSLGQNFVHDANTVRRVVAASGVSRSDLVLEVGPGLGSLTLALLDRG 78

Query: 443 PKKLVLIEKDPRFLPSLE 496
              +  +E DP     L+
Sbjct: 79  -ATVTAVEIDPLLASRLQ 95


>UniRef50_Q60B77 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=5; Gammaproteobacteria|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Methylococcus capsulatus
          Length = 257

 Score = 42.3 bits (95), Expect = 0.011
 Identities = 23/65 (35%), Positives = 37/65 (56%)
 Frame = +2

Query: 302 RELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPRF 481
           +   QNFL +P +I +IV A G   +  + E+GPG G +TR ++ Q+   L  IE D   
Sbjct: 7   KRFGQNFLRDPGVIQEIVAAVGPAPSDRLVEIGPGEGVLTRELL-QSGACLEAIELDRDL 65

Query: 482 LPSLE 496
           + +L+
Sbjct: 66  VAALK 70


>UniRef50_Q5L6H5 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=8; Chlamydiaceae|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Chlamydophila abortus
          Length = 278

 Score = 42.3 bits (95), Expect = 0.011
 Identities = 26/76 (34%), Positives = 41/76 (53%)
 Frame = +2

Query: 293 RALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKD 472
           R  + LSQNFL++  ++ KI+  S       V E+GPG G +T  ++ Q    +V +EKD
Sbjct: 19  RPKKGLSQNFLIDGNILRKILAVSCVQAGDWVLEIGPGFGALTEVLVNQG-AHVVALEKD 77

Query: 473 PRFLPSLELLADLVEI 520
                +L+ L   +EI
Sbjct: 78  SMLEETLKQLPIHLEI 93


>UniRef50_O67680 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=1; Aquifex aeolicus|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Aquifex aeolicus
          Length = 248

 Score = 42.3 bits (95), Expect = 0.011
 Identities = 21/73 (28%), Positives = 39/73 (53%)
 Frame = +2

Query: 290 LRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEK 469
           +R  +   Q+ L+   ++ KI       + +TV EVG G G +T+ +++   KKL +IE 
Sbjct: 2   VRLKKSFGQHLLVSEGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIEL 61

Query: 470 DPRFLPSLELLAD 508
           D   + +L+ + D
Sbjct: 62  DREMVENLKSIGD 74


>UniRef50_Q2IFT9 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=3; Cystobacterineae|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Anaeromyxobacter dehalogenans
           (strain 2CP-C)
          Length = 284

 Score = 42.3 bits (95), Expect = 0.011
 Identities = 23/72 (31%), Positives = 39/72 (54%)
 Frame = +2

Query: 257 PSIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIR 436
           PS + ++  Y LRA +   QNFL E  ++D I R +       V E+G G G +T  ++ 
Sbjct: 6   PSPRALLDRYDLRAKKSWGQNFLGEEAVLDDIARLAAPRAGDPVLELGAGLGHLTARLLA 65

Query: 437 QAPKKLVLIEKD 472
           +   ++V +E+D
Sbjct: 66  RG-ARVVAVERD 76


>UniRef50_Q6BSY5 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=16; Dikarya|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Debaryomyces hansenii (Yeast)
           (Torulaspora hansenii)
          Length = 327

 Score = 42.3 bits (95), Expect = 0.011
 Identities = 24/62 (38%), Positives = 33/62 (53%)
 Frame = +2

Query: 308 LSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPRFLP 487
           L Q+ L  P +   IV  +G   +  V EVGPG G +T  I+ QA +K++  E DPR   
Sbjct: 36  LGQHILKNPLVAQGIVDKAGIKPSDIVLEVGPGTGNLTVRILEQA-RKVIASEMDPRMAA 94

Query: 488 SL 493
            L
Sbjct: 95  EL 96


>UniRef50_Q9UNQ2 Cluster: Probable dimethyladenosine transferase (EC
           2.1.1.-) (S- adenosylmethionine-6-N',N'-adenosyl(rRNA)
           dimethyltransferase); n=22; Coelomata|Rep: Probable
           dimethyladenosine transferase (EC 2.1.1.-) (S-
           adenosylmethionine-6-N',N'-adenosyl(rRNA)
           dimethyltransferase) - Homo sapiens (Human)
          Length = 313

 Score = 42.3 bits (95), Expect = 0.011
 Identities = 22/62 (35%), Positives = 34/62 (54%)
 Frame = +2

Query: 308 LSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPRFLP 487
           + Q+ L  P +I+ I+  +       V EVGPG G +T  ++ +A KK+V  E DPR + 
Sbjct: 34  IGQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKA-KKVVACELDPRLVA 92

Query: 488 SL 493
            L
Sbjct: 93  EL 94


>UniRef50_Q8GDV8 Cluster: Dimethyladenosine transferase; n=1;
           Heliobacillus mobilis|Rep: Dimethyladenosine transferase
           - Heliobacillus mobilis
          Length = 283

 Score = 41.9 bits (94), Expect = 0.015
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
 Frame = +2

Query: 263 IKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQ- 439
           ++  I  Y +RA + L QNFL +   + +IV A+       V E+GPGP  +T  +    
Sbjct: 5   LRQRIAQYGIRAKKGLGQNFLSDSEYVYRIVDAAELSSGDVVVEIGPGPATLTPHLAEAV 64

Query: 440 APK-KLVLIEKDPRFLPSL 493
            P+ K++ IE D    P L
Sbjct: 65  GPEGKVLAIEVDESLRPLL 83


>UniRef50_Q9PPN8 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=2; Ureaplasma parvum|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Ureaplasma parvum (Ureaplasma
           urealyticum biotype 1)
          Length = 277

 Score = 41.9 bits (94), Expect = 0.015
 Identities = 25/78 (32%), Positives = 41/78 (52%)
 Frame = +2

Query: 263 IKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQA 442
           IK+ +K       +++ QNFL+   + +KIV  +   ++  + E+GPG G IT  I+ Q 
Sbjct: 6   IKNKLKQESFVPSKKMGQNFLLSNNIKNKIVDVANINKDDLILEIGPGWGAIT-EILVQK 64

Query: 443 PKKLVLIEKDPRFLPSLE 496
              L+ IE D R    L+
Sbjct: 65  TNILIAIELDKRLYAHLK 82


>UniRef50_P41819 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=10; Eukaryota|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Saccharomyces cerevisiae (Baker's
           yeast)
          Length = 318

 Score = 41.9 bits (94), Expect = 0.015
 Identities = 24/63 (38%), Positives = 33/63 (52%)
 Frame = +2

Query: 305 ELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPRFL 484
           +L Q+ L  P +   IV  +    +  V EVGPG G +T  I+ QA K +V +E DPR  
Sbjct: 33  DLGQHILKNPLVAQGIVDKAQIRPSDVVLEVGPGTGNLTVRILEQA-KNVVAVEMDPRMA 91

Query: 485 PSL 493
             L
Sbjct: 92  AEL 94


>UniRef50_Q1EZ10 Cluster: RRNA (Adenine-N(6)-)-methyltransferase;
           n=1; Clostridium oremlandii OhILAs|Rep: RRNA
           (Adenine-N(6)-)-methyltransferase - Clostridium
           oremlandii OhILAs
          Length = 293

 Score = 41.5 bits (93), Expect = 0.020
 Identities = 20/54 (37%), Positives = 34/54 (62%)
 Frame = +2

Query: 311 SQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKD 472
           SQNFL   +L+++++R S   ++  V E+G G G IT  ++ +  KKL ++E D
Sbjct: 13  SQNFLHSKKLVNELIRKSNISKDDIVIEIGGGKGIITEQLVEKC-KKLYVVEYD 65


>UniRef50_Q319T0 Cluster: Nucleotide-diphosphate-sugar epimerase,
           membrane associated; n=1; Prochlorococcus marinus str.
           MIT 9312|Rep: Nucleotide-diphosphate-sugar epimerase,
           membrane associated - Prochlorococcus marinus (strain
           MIT 9312)
          Length = 635

 Score = 41.1 bits (92), Expect = 0.026
 Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
 Frame = +2

Query: 242 KAASIPSIKDVIKLYKL-RALRELSQNFLMEPRLIDKIVRA-SGNIQNHTVCEVGPGP-- 409
           K +SIPSIK++ K   +  +L+ +    L+E   +D  +   S +I+   +C  G G   
Sbjct: 240 KISSIPSIKEITKQKSIIDSLKPIDVEDLLERDAVDPYIHLLSKDIKGAIICITGAGGSI 299

Query: 410 -GGITRSIIRQAPKKLVLIE 466
            G +TR II   PKK++L++
Sbjct: 300 GGELTRQIIELNPKKIILLD 319


>UniRef50_P43433 Cluster: Mycinamicin-resistance protein myrB; n=2;
           Micromonospora griseorubida|Rep: Mycinamicin-resistance
           protein myrB - Micromonospora griseorubida
          Length = 311

 Score = 41.1 bits (92), Expect = 0.026
 Identities = 22/64 (34%), Positives = 35/64 (54%)
 Frame = +2

Query: 305 ELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPRFL 484
           EL QNFL++  +  +I     +   H V E+G G G ITR+++  A   +  +E DPR +
Sbjct: 23  ELGQNFLVDRGVCTRIAEVVSSTTAHPVLELGAGDGAITRALV-AANLPVTALELDPRRV 81

Query: 485 PSLE 496
             L+
Sbjct: 82  RRLQ 85


>UniRef50_Q8G6I3 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=35; Bacteria|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Bifidobacterium longum
          Length = 308

 Score = 41.1 bits (92), Expect = 0.026
 Identities = 20/58 (34%), Positives = 34/58 (58%)
 Frame = +2

Query: 302 RELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDP 475
           ++  QNF+++P  + +IVR +G      V EVGPG G +T +I+ +    +  +E DP
Sbjct: 30  KKFGQNFVIDPGTVRRIVREAGVTAADHVMEVGPGLGSLTLAIL-ETGATMTAVEIDP 86


>UniRef50_Q9Y2R0 Cluster: Coiled-coil domain-containing protein 56;
           n=48; Euteleostomi|Rep: Coiled-coil domain-containing
           protein 56 - Homo sapiens (Human)
          Length = 106

 Score = 41.1 bits (92), Expect = 0.026
 Identities = 18/38 (47%), Positives = 26/38 (68%)
 Frame = +1

Query: 85  RNRLTGFTIGAGVLGVYLYSIFAIKQETFLDDFDEPPK 198
           RN +TG  IGA VL +Y Y+ ++I QE FLD+ ++  K
Sbjct: 56  RNIVTGLGIGALVLAIYGYTFYSISQERFLDELEDEAK 93


>UniRef50_Q2BK13 Cluster: Dimethyladenosine transferase; n=2;
           Gammaproteobacteria|Rep: Dimethyladenosine transferase -
           Neptuniibacter caesariensis
          Length = 268

 Score = 40.7 bits (91), Expect = 0.034
 Identities = 23/67 (34%), Positives = 39/67 (58%)
 Frame = +2

Query: 293 RALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKD 472
           +A +   QNFL +  +I +I+R+    +  T+ E+GPG G +T  ++ +A  +L  IE D
Sbjct: 9   KARKRFGQNFLHDHGIIRRIIRSIAPHETDTMVEIGPGLGALTEELLAEA-GELDAIELD 67

Query: 473 PRFLPSL 493
            R LP +
Sbjct: 68  -RDLPPI 73


>UniRef50_A4BLW2 Cluster: Dimethyladenosine transferase; n=1;
           Nitrococcus mobilis Nb-231|Rep: Dimethyladenosine
           transferase - Nitrococcus mobilis Nb-231
          Length = 271

 Score = 40.7 bits (91), Expect = 0.034
 Identities = 23/72 (31%), Positives = 36/72 (50%)
 Frame = +2

Query: 293 RALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKD 472
           RA R   QNFL +P ++ ++V +          E+G G G +TR ++ +A + LV IE D
Sbjct: 5   RARRRFGQNFLHDPSILHRMVDSIDPRPGQCCIEIGSGLGALTRPLLERA-RALVAIELD 63

Query: 473 PRFLPSLELLAD 508
              +  L    D
Sbjct: 64  RDLIEPLRRCCD 75


>UniRef50_A0LNI3 Cluster: Dimethyladenosine transferase; n=1;
           Syntrophobacter fumaroxidans MPOB|Rep: Dimethyladenosine
           transferase - Syntrophobacter fumaroxidans (strain DSM
           10017 / MPOB)
          Length = 285

 Score = 40.7 bits (91), Expect = 0.034
 Identities = 26/80 (32%), Positives = 40/80 (50%)
 Frame = +2

Query: 257 PSIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIR 436
           P+ +   +L   R  +   Q+FL      ++IVR +    + TV E+GPG G +TR I+ 
Sbjct: 7   PTPRQYFRLRDTRPRKRFGQHFLDHSATAEQIVRCAEFDASDTVVEIGPGLGALTRFILP 66

Query: 437 QAPKKLVLIEKDPRFLPSLE 496
            A  +L L+E D      LE
Sbjct: 67  LA-ARLHLVELDRDLATYLE 85


>UniRef50_Q5CXI8 Cluster: Dim1p-like ERMB/KSGA methylase; n=2;
           Cryptosporidium parvum|Rep: Dim1p-like ERMB/KSGA
           methylase - Cryptosporidium parvum Iowa II
          Length = 385

 Score = 40.7 bits (91), Expect = 0.034
 Identities = 20/65 (30%), Positives = 37/65 (56%)
 Frame = +2

Query: 302 RELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPRF 481
           ++  Q+ L    ++DKI+ A+      TV E+GPG G +T  ++  A +K+V  + DPR 
Sbjct: 60  KKKGQHLLKNTGILDKIILAADIKPTDTVLEIGPGTGNLTMRLLPLA-RKVVAFDIDPRM 118

Query: 482 LPSLE 496
           +  ++
Sbjct: 119 VAEVK 123


>UniRef50_Q4Q7U7 Cluster: Ribosomal RNA adenine dimethylase family
           protein, putative; n=7; Eukaryota|Rep: Ribosomal RNA
           adenine dimethylase family protein, putative -
           Leishmania major
          Length = 374

 Score = 40.7 bits (91), Expect = 0.034
 Identities = 21/60 (35%), Positives = 31/60 (51%)
 Frame = +2

Query: 314 QNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPRFLPSL 493
           Q+ L  P +I  IV  +       V E+GPG G +T  ++ Q  KK++  E DPR +  L
Sbjct: 77  QHILKNPLVIAAIVEKAAIKPTDIVIEIGPGTGNLTEKLL-QTAKKVIAFEIDPRMVAEL 135


>UniRef50_O51536 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=3; Borrelia burgdorferi
           group|Rep: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Borrelia burgdorferi (Lyme
           disease spirochete)
          Length = 281

 Score = 40.7 bits (91), Expect = 0.034
 Identities = 19/63 (30%), Positives = 35/63 (55%)
 Frame = +2

Query: 251 SIPSIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSI 430
           SI SIK  +K  K+   +   QN+L+   +  KI+ +    +N  + E+GPG G +T  +
Sbjct: 14  SITSIKQTLKERKIAPRKLWGQNYLINESIRQKIIESLDIKENEKIWEIGPGLGAMTEIL 73

Query: 431 IRQ 439
           +++
Sbjct: 74  LKK 76


>UniRef50_UPI00003AC944 Cluster: PREDICTED: similar to HSPC009; n=1;
           Gallus gallus|Rep: PREDICTED: similar to HSPC009 -
           Gallus gallus
          Length = 104

 Score = 40.3 bits (90), Expect = 0.045
 Identities = 19/56 (33%), Positives = 32/56 (57%)
 Frame = +1

Query: 22  YMKLIEERNRERVQKLQVISKRNRLTGFTIGAGVLGVYLYSIFAIKQETFLDDFDE 189
           +M  +E   R+R  + Q+ S RN L    IG    G+Y Y+ +++ QE FLD+ ++
Sbjct: 32  FMAQVERAQRQRALQRQLRS-RNVLLALGIGVVTAGIYGYTFYSVSQEQFLDELEQ 86


>UniRef50_Q057Y3 Cluster: Dimethyladenosine transferase; n=1;
           Buchnera aphidicola str. Cc (Cinara cedri)|Rep:
           Dimethyladenosine transferase - Buchnera aphidicola
           subsp. Cinara cedri
          Length = 275

 Score = 40.3 bits (90), Expect = 0.045
 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
 Frame = +2

Query: 299 LRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVL-IEKDP 475
           +++L QNFL    +I++I+      +N  + E+G G G +T  I R   K +VL I++D 
Sbjct: 12  IKKLGQNFLQNKEIINQIINLININKNDNIIEIGSGLGALTFPICRIIKKMIVLEIDEDL 71

Query: 476 RFLPSLELLADLVEI 520
            F  +  L    ++I
Sbjct: 72  VFFLTQSLFIKKLQI 86


>UniRef50_A7HGZ5 Cluster: Dimethyladenosine transferase; n=1;
           Anaeromyxobacter sp. Fw109-5|Rep: Dimethyladenosine
           transferase - Anaeromyxobacter sp. Fw109-5
          Length = 356

 Score = 40.3 bits (90), Expect = 0.045
 Identities = 21/72 (29%), Positives = 39/72 (54%)
 Frame = +2

Query: 257 PSIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIR 436
           PS + ++  Y LRA +   QNFL +  ++D I R +       V E+G G G +T  ++ 
Sbjct: 13  PSPRALLDKYGLRAKKSWGQNFLGDEAILDDIARLAAPRPGDPVVELGAGLGHLTARLLA 72

Query: 437 QAPKKLVLIEKD 472
           +   +++ +E+D
Sbjct: 73  RG-AEVIAVERD 83


>UniRef50_A3U413 Cluster: Putative uncharacterized protein; n=2;
           Rhodobacterales|Rep: Putative uncharacterized protein -
           Oceanicola batsensis HTCC2597
          Length = 185

 Score = 40.3 bits (90), Expect = 0.045
 Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
 Frame = +2

Query: 290 LRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQ--APKKLVLI 463
           +R  RE+S        +  K+     N++   V E+GPG G  T++I+ +  AP++L+L+
Sbjct: 13  MRNPREVSAIAPSSAAVARKMTEGVENVEGPIV-EIGPGTGSFTKAILERGVAPERLILM 71

Query: 464 EKDPRFLPSL 493
           E +PRF   L
Sbjct: 72  ELNPRFCEEL 81


>UniRef50_UPI0000D9B5BF Cluster: PREDICTED: similar to CG7319-PC,
           isoform C; n=1; Macaca mulatta|Rep: PREDICTED: similar
           to CG7319-PC, isoform C - Macaca mulatta
          Length = 97

 Score = 39.9 bits (89), Expect = 0.060
 Identities = 19/45 (42%), Positives = 28/45 (62%)
 Frame = +1

Query: 67  LQVISKRNRLTGFTIGAGVLGVYLYSIFAIKQETFLDDFDEPPKI 201
           LQ    RN +T   IGA VL +Y Y+ ++I QE FLD+ ++  K+
Sbjct: 50  LQQRQTRNIVTCLGIGALVLAIYGYTFYSISQERFLDELEDEAKV 94


>UniRef50_Q5YW73 Cluster: Putative ribosomal RNA adenine
           N-6-methyltransferase; n=1; Nocardia farcinica|Rep:
           Putative ribosomal RNA adenine N-6-methyltransferase -
           Nocardia farcinica
          Length = 269

 Score = 39.9 bits (89), Expect = 0.060
 Identities = 23/67 (34%), Positives = 36/67 (53%)
 Frame = +2

Query: 296 ALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDP 475
           A +  SQNFL +  +  +IVR++G      V E+GPG G +T  ++  A + L   E D 
Sbjct: 13  ARKRFSQNFLADADIARRIVRSAGVGAGDLVLEIGPGDGMLTAQLLGVAGRVLA-YEIDA 71

Query: 476 RFLPSLE 496
           R+   L+
Sbjct: 72  RYAARLQ 78


>UniRef50_A6DRB2 Cluster: Dimethyladenosine transferase; n=1;
           Lentisphaera araneosa HTCC2155|Rep: Dimethyladenosine
           transferase - Lentisphaera araneosa HTCC2155
          Length = 272

 Score = 39.9 bits (89), Expect = 0.060
 Identities = 17/54 (31%), Positives = 31/54 (57%)
 Frame = +2

Query: 275 IKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIR 436
           ++ Y +   +   QNFL++  L+D + R+       T+ EVGPG G +TR +++
Sbjct: 10  LEKYGIAPAKSRGQNFLIDNNLLDAMCRSMDIQAGETILEVGPGAGVLTREMLK 63


>UniRef50_A0E6J3 Cluster: Chromosome undetermined scaffold_8, whole
           genome shotgun sequence; n=4; Eukaryota|Rep: Chromosome
           undetermined scaffold_8, whole genome shotgun sequence -
           Paramecium tetraurelia
          Length = 353

 Score = 39.9 bits (89), Expect = 0.060
 Identities = 19/64 (29%), Positives = 36/64 (56%)
 Frame = +2

Query: 302 RELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPRF 481
           +   Q+ L+  +++  IV  S       V E+GPG G +T  ++++A K+++ +E DPR 
Sbjct: 14  KSFGQHILINQQILQMIVDKSAIRPTDIVLEIGPGTGNLTELLLQRA-KQVICVEIDPRM 72

Query: 482 LPSL 493
           +  L
Sbjct: 73  VIEL 76


>UniRef50_Q5V588 Cluster: Probable dimethyladenosine transferase (EC
           2.1.1.-) (S- adenosylmethionine-6-N',N'-adenosyl(rRNA)
           dimethyltransferase); n=4; Halobacteriaceae|Rep:
           Probable dimethyladenosine transferase (EC 2.1.1.-) (S-
           adenosylmethionine-6-N',N'-adenosyl(rRNA)
           dimethyltransferase) - Haloarcula marismortui
           (Halobacterium marismortui)
          Length = 285

 Score = 39.9 bits (89), Expect = 0.060
 Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
 Frame = +2

Query: 293 RALRELSQNFLMEPRLIDKIVR--ASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIE 466
           RA     Q+FL++ R++D+I       +I    V E+G GPG +T  ++  A +++  +E
Sbjct: 21  RADTRQDQHFLVDDRVLDRIPEYATDADIDLSHVLEIGAGPGALTDRLLATA-ERVTAVE 79

Query: 467 KDPRFLPSL 493
           +DP F   L
Sbjct: 80  RDPDFAAHL 88


>UniRef50_Q9PLW7 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=16; Campylobacter|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Campylobacter jejuni
          Length = 266

 Score = 39.9 bits (89), Expect = 0.060
 Identities = 18/61 (29%), Positives = 38/61 (62%)
 Frame = +2

Query: 290 LRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEK 469
           ++A ++  QNFL++  ++ KI++A     N+ + E+GPG G +T+ +++ +  K   I+ 
Sbjct: 2   VKAKKQYGQNFLIDKSVLAKIIQAIPKEMNN-IIEIGPGLGDLTQELLKISQVKAYEIDN 60

Query: 470 D 472
           D
Sbjct: 61  D 61


>UniRef50_Q1NUM3 Cluster: 16S rRNA dimethylase; n=2; delta
           proteobacterium MLMS-1|Rep: 16S rRNA dimethylase - delta
           proteobacterium MLMS-1
          Length = 304

 Score = 39.5 bits (88), Expect = 0.079
 Identities = 19/63 (30%), Positives = 35/63 (55%)
 Frame = +2

Query: 272 VIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKK 451
           ++  +KL   ++  QNFL++P + ++IV  +      TV E+G G G +TR +  +  K 
Sbjct: 25  ILSQHKLAPSKQRGQNFLVQPAVAERIVEVAEIEPTATVVELGVGLGALTRPLAARCAKV 84

Query: 452 LVL 460
           + L
Sbjct: 85  IGL 87


>UniRef50_A5IXI9 Cluster: Dimethyladenosine
           transferase(S-adenosylmethionine-6-N', N'-
           adenosyl(RRNA)dimethyltransferase); n=1; Mycoplasma
           agalactiae|Rep: Dimethyladenosine
           transferase(S-adenosylmethionine-6-N', N'-
           adenosyl(RRNA)dimethyltransferase) - Mycoplasma
           agalactiae
          Length = 270

 Score = 39.5 bits (88), Expect = 0.079
 Identities = 22/67 (32%), Positives = 35/67 (52%)
 Frame = +2

Query: 293 RALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKD 472
           +A ++  QNFL    +I KIV      +   + E+GPG G +T+ ++ +   KLV  E D
Sbjct: 17  KAKKKFGQNFLHSDSVIKKIVDIISP-EGKQIIEIGPGTGALTKHLVNKC-SKLVAFEID 74

Query: 473 PRFLPSL 493
           P  +  L
Sbjct: 75  PDMIEFL 81


>UniRef50_A5EY68 Cluster: RRNA adenine dimethylase; n=1;
           Dichelobacter nodosus VCS1703A|Rep: RRNA adenine
           dimethylase - Dichelobacter nodosus (strain VCS1703A)
          Length = 263

 Score = 39.5 bits (88), Expect = 0.079
 Identities = 22/82 (26%), Positives = 43/82 (52%)
 Frame = +2

Query: 287 KLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIE 466
           +++A++ L Q+FL +  +I +++ A        + E+GPG G +T  ++ +   +L  +E
Sbjct: 3   EIKAVKRLGQHFLRDEGIITQLLAAIDPKPQQKILEIGPGLGALTLPVLERC-HELYAVE 61

Query: 467 KDPRFLPSLELLADLVEIKSML 532
            D R L  L   A  V I  ++
Sbjct: 62  LDHRVLQPLSEKAAAVGILHLI 83


>UniRef50_Q1NYL1 Cluster: Dimethyladenosine transferase; n=1;
           Candidatus Sulcia muelleri str. Hc (Homalodisca
           coagulata)|Rep: Dimethyladenosine transferase -
           Candidatus Sulcia muelleri str. Hc (Homalodisca
           coagulata)
          Length = 251

 Score = 39.1 bits (87), Expect = 0.10
 Identities = 20/72 (27%), Positives = 42/72 (58%)
 Frame = +2

Query: 302 RELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPRF 481
           ++L Q FL +  +  KIV +    ++ T+ E+GPG G +T+ ++    K L L+E D ++
Sbjct: 5   KKLCQYFLHDKNIAKKIVNSISFKESKTIVEIGPGMGILTQYLLLN-NKNLFLLEIDKKY 63

Query: 482 LPSLELLADLVE 517
           +  L++   +++
Sbjct: 64  VEYLKIKYPIIK 75


>UniRef50_A0LC43 Cluster: Methyltransferase type 12; n=1;
           Magnetococcus sp. MC-1|Rep: Methyltransferase type 12 -
           Magnetococcus sp. (strain MC-1)
          Length = 378

 Score = 39.1 bits (87), Expect = 0.10
 Identities = 20/69 (28%), Positives = 34/69 (49%)
 Frame = +2

Query: 299 LRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPR 478
           +R+L+Q F     L  ++    G +   +V E+GP  G   R I+ Q P     +E +P 
Sbjct: 22  VRDLTQLFATRRALFMQLGLPPGLLAGKSVLEIGPAQGAHARYILEQRPASYTFLEANPF 81

Query: 479 FLPSLELLA 505
             P+L+ +A
Sbjct: 82  CTPTLQQIA 90


>UniRef50_Q74LI0 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=5; Lactobacillus|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Lactobacillus johnsonii
          Length = 296

 Score = 39.1 bits (87), Expect = 0.10
 Identities = 20/61 (32%), Positives = 31/61 (50%)
 Frame = +2

Query: 272 VIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKK 451
           ++  Y + A + L QNFL++   I  IV A+       V E+GPG G +T  ++    K 
Sbjct: 16  IVNRYFMHAKKNLGQNFLVDLPAIKGIVEAADIQPGDQVIEIGPGIGSLTEQLLLAGAKV 75

Query: 452 L 454
           L
Sbjct: 76  L 76


>UniRef50_A6C441 Cluster: Dimethyladenosine transferase; n=1;
           Planctomyces maris DSM 8797|Rep: Dimethyladenosine
           transferase - Planctomyces maris DSM 8797
          Length = 306

 Score = 38.7 bits (86), Expect = 0.14
 Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
 Frame = +2

Query: 305 ELSQNFLMEPRLIDKIVRASGNIQ-NHTVCEVGPGPGGITRSIIRQAPKKLVLIEKD 472
           +L QNFL++  +I+ +V   G+IQ N  V EVG G GG+T  + +QA   ++ +E D
Sbjct: 26  DLGQNFLIDLNIIEYVVE-HGHIQPNDIVLEVGTGTGGMTTFMAQQA-AHVITVEYD 80


>UniRef50_Q30NR7 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=1; Thiomicrospira denitrificans
           ATCC 33889|Rep: Dimethyladenosine transferase (EC
           2.1.1.-) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Thiomicrospira denitrificans
           (strain ATCC 33889 / DSM 1351)
          Length = 267

 Score = 38.7 bits (86), Expect = 0.14
 Identities = 18/49 (36%), Positives = 30/49 (61%)
 Frame = +2

Query: 287 KLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSII 433
           K+ A ++  QNFL +  ++ KI+ A  N  N  V E+GPG G +T+ ++
Sbjct: 3   KIVAKKKFGQNFLKDESVLQKIIEAMPNNDNKIV-EIGPGLGDLTKFLV 50


>UniRef50_Q5ZZN4 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=5; Mycoplasma hyopneumoniae|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Mycoplasma hyopneumoniae (strain
           232)
          Length = 259

 Score = 38.7 bits (86), Expect = 0.14
 Identities = 21/65 (32%), Positives = 38/65 (58%)
 Frame = +2

Query: 302 RELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPRF 481
           + L QNFL + ++ +KIV  + +++N  + E+G G G +T  ++ +A K +   E D   
Sbjct: 8   KRLGQNFLKDRKIAEKIVE-NIDLKNKEIIEIGCGTGFLTNFLLEKA-KFVTCYEIDKNL 65

Query: 482 LPSLE 496
           +P LE
Sbjct: 66  IPILE 70


>UniRef50_P07287 Cluster: rRNA adenine N-6-methyltransferase; n=6;
           Actinomycetales|Rep: rRNA adenine N-6-methyltransferase
           - Saccharopolyspora erythraea (strain NRRL 23338)
          Length = 381

 Score = 38.7 bits (86), Expect = 0.14
 Identities = 23/67 (34%), Positives = 35/67 (52%)
 Frame = +2

Query: 293 RALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKD 472
           R  R+  QNFL + + I +I   +    +  V E GPG G +TR +  +A +++   E D
Sbjct: 34  RNRRQFGQNFLRDRKTIARIAETAELRPDLPVLEAGPGEGLLTRELADRA-RQVTSYEID 92

Query: 473 PRFLPSL 493
           PR   SL
Sbjct: 93  PRLAKSL 99


>UniRef50_A7CY98 Cluster: Ribosomal RNA adenine methylase
           transferase; n=1; Opitutaceae bacterium TAV2|Rep:
           Ribosomal RNA adenine methylase transferase -
           Opitutaceae bacterium TAV2
          Length = 285

 Score = 38.3 bits (85), Expect = 0.18
 Identities = 21/57 (36%), Positives = 33/57 (57%)
 Frame = +2

Query: 302 RELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKD 472
           R L QNFL++  ++ K +  +      TV EVGPG G +TR+++  A   +  +EKD
Sbjct: 21  RFLGQNFLVDGNIVRKSLELAAVSAGDTVVEVGPGLGTLTRALL-IAGANVWAVEKD 76


>UniRef50_Q4D084 Cluster: RRNA dimethyltransferase, putative; n=7;
           Trypanosomatidae|Rep: RRNA dimethyltransferase, putative
           - Trypanosoma cruzi
          Length = 482

 Score = 38.3 bits (85), Expect = 0.18
 Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
 Frame = +2

Query: 263 IKDVIKLYKLRALRELSQNFLMEPRLIDKIV----RASGNIQNHTVCEVGPGPGGITRSI 430
           +K + K+     L +  Q F++  +L  +IV    R +    +  + E+GPG G +TRS+
Sbjct: 74  LKHLFKVPHAGYLAKYDQRFILNLKLTHQIVSHLSRTTLKTHDKLLVELGPGTGALTRSL 133

Query: 431 IRQAPKKLVLIEKDPRFLPSLELLADLVEIK 523
           + +    ++ IE D RF   LE +    + K
Sbjct: 134 LTRPCVAVLGIEADERFNAHLEQIRQYTDGK 164


>UniRef50_Q9PBJ6 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=7; Xanthomonadaceae|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Xylella fastidiosa
          Length = 265

 Score = 38.3 bits (85), Expect = 0.18
 Identities = 23/76 (30%), Positives = 37/76 (48%)
 Frame = +2

Query: 278 KLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLV 457
           +L+   A +   Q+FL++   ID+I+ A     N  + E+GPG G IT  +++     L 
Sbjct: 4   QLFNAPAKKAFGQHFLVDRYYIDRIIHAITPQPNDHIVEIGPGQGAITLPLLK-CCGSLT 62

Query: 458 LIEKDPRFLPSLELLA 505
            IE D   +  L   A
Sbjct: 63  AIELDRDLIAPLTAAA 78


>UniRef50_Q7VM33 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=79; Proteobacteria|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Haemophilus ducreyi
          Length = 289

 Score = 38.3 bits (85), Expect = 0.18
 Identities = 21/59 (35%), Positives = 30/59 (50%)
 Frame = +2

Query: 296 ALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKD 472
           A +   QNFL +  +I  IV A        + E+GPG G +T  +  Q  +KL +IE D
Sbjct: 14  ARKRFGQNFLSDMNVIHNIVAAINPRNEDFLLEIGPGLGALTEPVAEQV-EKLTVIELD 71


>UniRef50_Q8R6B1 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=3; Fusobacterium nucleatum|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Fusobacterium nucleatum subsp.
           nucleatum
          Length = 264

 Score = 38.3 bits (85), Expect = 0.18
 Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
 Frame = +2

Query: 302 RELSQNFLM-EPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKD 472
           ++  QNFL  +  +++KI+  S    N  + E+GPG G +T S++ +  KK+  +E D
Sbjct: 7   KKYGQNFLNNKDEILNKIIEVSNIDDNDEILEIGPGQGALT-SLLVERVKKITCVEID 63


>UniRef50_Q6MQ47 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=1; Bdellovibrio
           bacteriovorus|Rep: Dimethyladenosine transferase (EC
           2.1.1.-) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Bdellovibrio bacteriovorus
          Length = 274

 Score = 38.3 bits (85), Expect = 0.18
 Identities = 21/61 (34%), Positives = 33/61 (54%)
 Frame = +2

Query: 290 LRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEK 469
           + A + L QNFL+   +I++I+          + EVGPGPG +T  ++ +    L LIE 
Sbjct: 17  IAAKKSLGQNFLVSDTVINRIIDQVKAFAPEELVEVGPGPGALT-DLLLELNLPLQLIEL 75

Query: 470 D 472
           D
Sbjct: 76  D 76


>UniRef50_UPI000023DDF8 Cluster: hypothetical protein FG05049.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG05049.1 - Gibberella zeae PH-1
          Length = 346

 Score = 37.9 bits (84), Expect = 0.24
 Identities = 22/62 (35%), Positives = 31/62 (50%)
 Frame = +2

Query: 308 LSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPRFLP 487
           + Q+ L  P + D IV  +      TV E+GPG G +T  I+ QA K +  +E D R   
Sbjct: 32  IGQHILKNPGIADTIVAKAYLKPTDTVLEIGPGTGVLTTRILEQA-KAVKAVELDTRMAA 90

Query: 488 SL 493
            L
Sbjct: 91  EL 92


>UniRef50_Q0LDX5 Cluster: Dimethyladenosine transferase; n=1;
           Herpetosiphon aurantiacus ATCC 23779|Rep:
           Dimethyladenosine transferase - Herpetosiphon
           aurantiacus ATCC 23779
          Length = 288

 Score = 37.9 bits (84), Expect = 0.24
 Identities = 21/72 (29%), Positives = 37/72 (51%)
 Frame = +2

Query: 263 IKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQA 442
           ++  +    +R  + + QNFL++P  +   +  +    N  V EVGPG G +T  ++  A
Sbjct: 10  VRGALNSIGVRPSKSMGQNFLIDPTPLKLALEHAEVNPNDVVVEVGPGLGVLTWELL-NA 68

Query: 443 PKKLVLIEKDPR 478
              ++ IE DPR
Sbjct: 69  AGHVISIELDPR 80


>UniRef50_A5GEC6 Cluster: Phospholipid N-methyltransferase-like
           protein; n=1; Geobacter uraniumreducens Rf4|Rep:
           Phospholipid N-methyltransferase-like protein -
           Geobacter uraniumreducens Rf4
          Length = 208

 Score = 37.9 bits (84), Expect = 0.24
 Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
 Frame = +2

Query: 347 KIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPK--KLVLIEKDP 475
           +IV  +G     T+ E+GPG GG T++I+R AP   +L+ IE +P
Sbjct: 41  RIVDIAGICSAKTIVELGPGSGGTTQAILRAAPSYARLLSIEVNP 85


>UniRef50_O27381 Cluster: Probable dimethyladenosine transferase (EC
           2.1.1.-) (S- adenosylmethionine-6-N',N'-adenosyl(rRNA)
           dimethyltransferase); n=1; Methanothermobacter
           thermautotrophicus str. Delta H|Rep: Probable
           dimethyladenosine transferase (EC 2.1.1.-) (S-
           adenosylmethionine-6-N',N'-adenosyl(rRNA)
           dimethyltransferase) - Methanobacterium
           thermoautotrophicum
          Length = 273

 Score = 37.9 bits (84), Expect = 0.24
 Identities = 21/70 (30%), Positives = 38/70 (54%)
 Frame = +2

Query: 266 KDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAP 445
           ++V++ Y +R  R L QN+L++     +I+  +   ++  V E+GPG G +T  +   A 
Sbjct: 9   REVLRKYGVRLRRSLGQNYLIDEVKRQRILEYADLREDDRVLEIGPGIGTLTLPMAELA- 67

Query: 446 KKLVLIEKDP 475
             +  IE DP
Sbjct: 68  GHVTAIESDP 77


>UniRef50_Q01V27 Cluster: Dimethyladenosine transferase; n=1;
           Solibacter usitatus Ellin6076|Rep: Dimethyladenosine
           transferase - Solibacter usitatus (strain Ellin6076)
          Length = 247

 Score = 37.5 bits (83), Expect = 0.32
 Identities = 19/58 (32%), Positives = 32/58 (55%)
 Frame = +2

Query: 302 RELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDP 475
           ++L Q+FL    ++D+I  A        V E+GPG G +T  ++ Q   +++ IE DP
Sbjct: 3   QKLGQHFLSNGSVLDRIALAVCPEGEELVIEIGPGKGALTEKLL-QRSGRVIAIELDP 59


>UniRef50_A4S2A3 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
           Predicted protein - Ostreococcus lucimarinus CCE9901
          Length = 268

 Score = 37.5 bits (83), Expect = 0.32
 Identities = 19/59 (32%), Positives = 33/59 (55%)
 Frame = +2

Query: 296 ALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKD 472
           A R L Q+FL++  ++   V A+       V E+GPG G +T  ++++  + L  +EKD
Sbjct: 1   ARRWLGQHFLVDASVVTDAVEAARLGAGERVLEIGPGTGNLTNEMLKRGARVLA-VEKD 58


>UniRef50_A2EVN6 Cluster: Dimethyladenosine transferase family
           protein; n=1; Trichomonas vaginalis G3|Rep:
           Dimethyladenosine transferase family protein -
           Trichomonas vaginalis G3
          Length = 295

 Score = 37.5 bits (83), Expect = 0.32
 Identities = 19/63 (30%), Positives = 31/63 (49%)
 Frame = +2

Query: 308 LSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPRFLP 487
           L QN L    ++  IV A        + E+GPG G +T  ++ +   +++ IEKD R   
Sbjct: 21  LGQNILRSKVVVKNIVDAGEPRPGDKILEIGPGNGNMTEEMLSREGIEVIAIEKDQRMCV 80

Query: 488 SLE 496
            L+
Sbjct: 81  ELK 83


>UniRef50_P75113 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=4; Mycoplasma|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Mycoplasma pneumoniae
          Length = 263

 Score = 37.5 bits (83), Expect = 0.32
 Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
 Frame = +2

Query: 302 RELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIR-QAPKKLVLIEK 469
           R+L QNF ++  +I K  R   ++    + EVGPG G +T+++++ Q P   + ++K
Sbjct: 8   RKLGQNFTVDQSVIAKTCRLIKSLNPTALIEVGPGKGALTKALLKLQLPYHGIELDK 64


>UniRef50_P13079 Cluster: rRNA methyltransferase; n=1; Streptomyces
           thermotolerans|Rep: rRNA methyltransferase -
           Streptomyces thermotolerans
          Length = 299

 Score = 37.5 bits (83), Expect = 0.32
 Identities = 23/67 (34%), Positives = 32/67 (47%)
 Frame = +2

Query: 293 RALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKD 472
           R  R   QNFL++   + + VR +       V EVG G G ITR + R   +++V  E D
Sbjct: 47  RRRRVHGQNFLVDRETVQRFVRFADPDPGEVVLEVGAGNGAITRELARLC-RRVVAYEID 105

Query: 473 PRFLPSL 493
             F   L
Sbjct: 106 RHFADRL 112


>UniRef50_Q4RKQ6 Cluster: Chromosome 5 SCAF15026, whole genome
           shotgun sequence; n=4; Euteleostomi|Rep: Chromosome 5
           SCAF15026, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 478

 Score = 37.1 bits (82), Expect = 0.42
 Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
 Frame = +2

Query: 314 QNFLMEPRLIDKIVRASGNIQNHT--VCEVGPGPGGITRSIIRQAPKKLVLIEKDPRFLP 487
           ++F+++P L  K+V       N T  + +  PGPG +TR+++    +K+V +E +  FLP
Sbjct: 154 RHFIVDPDLA-KLVTQHLQPDNATTIIFDCNPGPGVLTRTLLNSGIQKVVALEGEKFFLP 212

Query: 488 SLE 496
            L+
Sbjct: 213 ELQ 215


>UniRef50_Q8D3I1 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=1; Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Wigglesworthia glossinidia
           brevipalpis
          Length = 261

 Score = 37.1 bits (82), Expect = 0.42
 Identities = 19/60 (31%), Positives = 32/60 (53%)
 Frame = +2

Query: 293 RALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKD 472
           + +++L QNFL + ++I KI+          + E+GPG G +T   I +  K +  IE D
Sbjct: 3   KPIKKLGQNFLKDKKIIKKIINFINPKYKDKIIEIGPGLGALTIP-ISKISKSITAIEID 61


>UniRef50_Q5F9W4 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=6; Betaproteobacteria|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Neisseria gonorrhoeae (strain
           ATCC 700825 / FA 1090)
          Length = 259

 Score = 37.1 bits (82), Expect = 0.42
 Identities = 22/70 (31%), Positives = 36/70 (51%)
 Frame = +2

Query: 293 RALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKD 472
           +A +   QNFL + R+I  IV A     +  V E+GPG   IT  + ++   +L ++E D
Sbjct: 5   KARKRFGQNFLQDTRIIGDIVNAVRPQADDVVIEIGPGLAAITEPLAKKL-NRLHVVEID 63

Query: 473 PRFLPSLELL 502
              +  L+ L
Sbjct: 64  RDIVCRLKTL 73


>UniRef50_Q0B0U3 Cluster: RRNA (Adenine-N(6)-)-methyltransferase;
           n=1; Syntrophomonas wolfei subsp. wolfei str.
           Goettingen|Rep: RRNA (Adenine-N(6)-)-methyltransferase -
           Syntrophomonas wolfei subsp. wolfei (strain Goettingen)
          Length = 294

 Score = 36.7 bits (81), Expect = 0.56
 Identities = 17/60 (28%), Positives = 31/60 (51%)
 Frame = +2

Query: 251 SIPSIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSI 430
           S+  I+  +  Y +   ++  QNFL++  ++ KI           + E+GPG GG+TR +
Sbjct: 6   SLSGIRYYMNKYGIHPRKKWGQNFLVDGNILRKIAHLCNPGCEKLLVEIGPGLGGLTREL 65


>UniRef50_O65090 Cluster: Dimethyladenosine transferase; n=6;
           Magnoliophyta|Rep: Dimethyladenosine transferase -
           Arabidopsis thaliana (Mouse-ear cress)
          Length = 343

 Score = 36.7 bits (81), Expect = 0.56
 Identities = 18/61 (29%), Positives = 32/61 (52%)
 Frame = +2

Query: 302 RELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPRF 481
           + L Q++++   + D++  A+   +   V E+GPG G +T  +I      L  IEKDP  
Sbjct: 73  KSLGQHYMLNSDINDQLASAADVKEGDFVLEIGPGTGSLTNVLINLGATVLA-IEKDPHM 131

Query: 482 L 484
           +
Sbjct: 132 V 132


>UniRef50_A2X0B1 Cluster: Putative uncharacterized protein; n=2;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. indica (Rice)
          Length = 266

 Score = 36.7 bits (81), Expect = 0.56
 Identities = 15/53 (28%), Positives = 33/53 (62%)
 Frame = +2

Query: 314 QNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKD 472
           +N+++  ++ +++V A+G  +   V E+GPG G +T +++  A   +  +EKD
Sbjct: 25  ENYMLNSKVNEELVAAAGVEEGDVVLEIGPGTGSLTAALL-DAGATVFAVEKD 76


>UniRef50_Q5KP18 Cluster: Mitochondrion protein, putative; n=1;
           Filobasidiella neoformans|Rep: Mitochondrion protein,
           putative - Cryptococcus neoformans (Filobasidiella
           neoformans)
          Length = 186

 Score = 36.7 bits (81), Expect = 0.56
 Identities = 20/40 (50%), Positives = 25/40 (62%)
 Frame = +1

Query: 88  NRLTGFTIGAGVLGVYLYSIFAIKQETFLDDFDEPPKIQQ 207
           N L G TI A  LGVY YSI A++Q+ F D  D  P I++
Sbjct: 36  NVLIGGTIVAFALGVYAYSISAVQQDDFSDVEDLLPPIEE 75


>UniRef50_O83357 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=1; Treponema pallidum|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Treponema pallidum
          Length = 285

 Score = 36.7 bits (81), Expect = 0.56
 Identities = 23/73 (31%), Positives = 39/73 (53%)
 Frame = +2

Query: 290 LRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEK 469
           LR  ++  QNFL++P L  ++V+     +   V E+G G G +T +++ Q    L + E 
Sbjct: 21  LRMHKKWGQNFLLDPVLRTQLVKILAPERGERVWEIGAGIGAMT-ALLVQNSDFLTVFEI 79

Query: 470 DPRFLPSLELLAD 508
           D  F+ +L  L D
Sbjct: 80  DRGFVQTLRKLFD 92


>UniRef50_UPI0000E87DD3 Cluster: dimethyladenosine transferase; n=1;
           Methylophilales bacterium HTCC2181|Rep:
           dimethyladenosine transferase - Methylophilales
           bacterium HTCC2181
          Length = 259

 Score = 36.3 bits (80), Expect = 0.74
 Identities = 14/48 (29%), Positives = 28/48 (58%)
 Frame = +2

Query: 290 LRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSII 433
           ++A ++  QNFL +  +I +I+      +   + E+GPG G +T+ I+
Sbjct: 2   IKAKKKFGQNFLTDTSIIKEIINHINPKEKDRILEIGPGMGALTKPIL 49


>UniRef50_A7HK88 Cluster: Dimethyladenosine transferase; n=1;
           Fervidobacterium nodosum Rt17-B1|Rep: Dimethyladenosine
           transferase - Fervidobacterium nodosum Rt17-B1
          Length = 261

 Score = 36.3 bits (80), Expect = 0.74
 Identities = 22/65 (33%), Positives = 33/65 (50%)
 Frame = +2

Query: 302 RELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPRF 481
           + L QNFL      +KIV  S   +N T+ E+G G G +T ++ +     +  IE D R 
Sbjct: 5   KSLGQNFLSSEIYAEKIVGLSNVEKNDTILEIGAGAGTLTVALAKTG-ATVFAIEIDNRM 63

Query: 482 LPSLE 496
            P L+
Sbjct: 64  EPILK 68


>UniRef50_Q2S0I2 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=1; Salinibacter ruber DSM
           13855|Rep: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Salinibacter ruber (strain DSM
           13855)
          Length = 296

 Score = 36.3 bits (80), Expect = 0.74
 Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
 Frame = +2

Query: 242 KAASIPSIKDVIKL-YKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGI 418
           +A S+P+    +K+    R  + L QNFL +P + +KIV          V EVG G G +
Sbjct: 17  RAFSVPTSNVPMKMSIPFRPKQSLGQNFLHDPNMAEKIVGTLTAPPEAHVVEVGAGTGVL 76

Query: 419 TRSIIRQAPKKLVLIEKDPR 478
           T   + +   +L  +E D R
Sbjct: 77  TER-LAERHDRLTALEIDER 95


>UniRef50_Q4FT44 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=3; Psychrobacter|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Psychrobacter arcticum
          Length = 287

 Score = 36.3 bits (80), Expect = 0.74
 Identities = 20/80 (25%), Positives = 41/80 (51%)
 Frame = +2

Query: 260 SIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQ 439
           SI + ++  K +  +   QNFL +  +I +IV +    ++  + E+GPG G +T  ++ +
Sbjct: 10  SISNSLRAAKHQPRKRFGQNFLHDRSVIREIVESIRLERDDNLIEIGPGMGALTEPLLAE 69

Query: 440 APKKLVLIEKDPRFLPSLEL 499
               + ++E D     SL +
Sbjct: 70  V-DAMTVVELDRDLADSLRI 88


>UniRef50_Q6AL71 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=1; Desulfotalea
           psychrophila|Rep: Dimethyladenosine transferase (EC
           2.1.1.-) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Desulfotalea psychrophila
          Length = 295

 Score = 36.3 bits (80), Expect = 0.74
 Identities = 22/66 (33%), Positives = 35/66 (53%)
 Frame = +2

Query: 275 IKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKL 454
           +K +KL   +   QNFL+  +  + IVRA    ++  + E+G G G +T  +  QA K +
Sbjct: 11  LKKHKLAPKKRFGQNFLVHKQTAEAIVRAGEVGEDDIITEIGVGLGALTVPMAHQA-KHV 69

Query: 455 VLIEKD 472
             IE D
Sbjct: 70  YGIEID 75


>UniRef50_Q46194 Cluster: 23S rRNA methlyase; n=1; Clostridium
           perfringens|Rep: 23S rRNA methlyase - Clostridium
           perfringens
          Length = 257

 Score = 35.9 bits (79), Expect = 0.98
 Identities = 15/45 (33%), Positives = 27/45 (60%)
 Frame = +2

Query: 308 LSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQA 442
           +SQNF+     I K+++ +   +N  V E+GPG G IT ++  ++
Sbjct: 16  VSQNFITSKNTIYKLIKKTNISKNDFVIEIGPGKGHITEALCEKS 60


>UniRef50_Q74MB4 Cluster: NEQ337; n=1; Nanoarchaeum equitans|Rep:
           NEQ337 - Nanoarchaeum equitans
          Length = 193

 Score = 35.9 bits (79), Expect = 0.98
 Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
 Frame = +2

Query: 383 TVCEVGPGPGGITRSIIRQA-PKKLVLIEKDPRFLPSLE 496
           T+ E+GPG G +T  +     P K+++ EKD R++P L+
Sbjct: 42  TIVEIGPGSGSLTMYLAYLVYPNKIIVYEKDDRWIPILK 80


>UniRef50_Q7U7D3 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=20; Cyanobacteria|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Synechococcus sp. (strain WH8102)
          Length = 302

 Score = 35.9 bits (79), Expect = 0.98
 Identities = 17/60 (28%), Positives = 32/60 (53%)
 Frame = +2

Query: 293 RALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKD 472
           +A +   Q++L +  ++D+IV A+    +  V EVGPG G +T  ++      +  +E D
Sbjct: 7   QARKRFGQHWLKDQTVLDRIVAAADLQPSDRVLEVGPGRGALTERLLSSPAAAVQAVELD 66


>UniRef50_Q8Y219 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=5; Burkholderiales|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Ralstonia solanacearum
           (Pseudomonas solanacearum)
          Length = 281

 Score = 35.9 bits (79), Expect = 0.98
 Identities = 20/68 (29%), Positives = 36/68 (52%)
 Frame = +2

Query: 293 RALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKD 472
           +A +   QNFL++  +I  IV A     +  + E+GPG G +T  ++ + P  L ++E D
Sbjct: 13  QARKRFGQNFLVDDGVIHAIVAAIDPQPDDVLVEIGPGLGALTVPLMERVP-TLQVVELD 71

Query: 473 PRFLPSLE 496
              +  L+
Sbjct: 72  RDLVARLQ 79


>UniRef50_Q2FSA9 Cluster: Probable dimethyladenosine transferase (EC
           2.1.1.-) (S- adenosylmethionine-6-N',N'-adenosyl(rRNA)
           dimethyltransferase); n=4; Methanomicrobiales|Rep:
           Probable dimethyladenosine transferase (EC 2.1.1.-) (S-
           adenosylmethionine-6-N',N'-adenosyl(rRNA)
           dimethyltransferase) - Methanospirillum hungatei (strain
           JF-1 / DSM 864)
          Length = 256

 Score = 35.9 bits (79), Expect = 0.98
 Identities = 20/68 (29%), Positives = 39/68 (57%)
 Frame = +2

Query: 290 LRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEK 469
           +RA R+  Q+FL +PR++ +I     +I    V E+GPG G +T +++ +   +++ +E 
Sbjct: 1   MRAYRD--QHFLTDPRIVARIADIL-DISGRIVLEIGPGEGILTEALLERG-ARVISVEL 56

Query: 470 DPRFLPSL 493
           D   +  L
Sbjct: 57  DRTLIERL 64


>UniRef50_A5K171 Cluster: Dimethyladenosine transferase, putative;
           n=6; Plasmodium|Rep: Dimethyladenosine transferase,
           putative - Plasmodium vivax
          Length = 417

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 19/61 (31%), Positives = 35/61 (57%)
 Frame = +2

Query: 314 QNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPRFLPSL 493
           Q+ L  P ++DKI+ A+    +  V E+G G G +T  ++  A KK++ I+ D R +  +
Sbjct: 86  QHLLKNPGILDKILLAAKIKSSDVVLEIGCGTGNLTVKLLPIA-KKVITIDIDARMVSEV 144

Query: 494 E 496
           +
Sbjct: 145 K 145


>UniRef50_UPI0000ECC87F Cluster: Mitochondrial dimethyladenosine
           transferase 2, mitochondrial precursor (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase 2) (Mitochondrial 12S rRNA
           dimethylase 2) (Mitochondrial transcription factor B2)
           (mtTFB2) (h-mtTFB2) (h-; n=2; Gallus gallus|Rep:
           Mitochondrial dimethyladenosine transferase 2,
           mitochondrial precursor (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase 2) (Mitochondrial 12S rRNA
           dimethylase 2) (Mitochondrial transcription factor B2)
           (mtTFB2) (h-mtTFB2) (h- - Gallus gallus
          Length = 351

 Score = 35.1 bits (77), Expect = 1.7
 Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
 Frame = +2

Query: 320 FLMEPRLIDKIVRA--SGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPRFLPSL 493
           F+  P+L   + R   +G+     V E  PGPG +TR+++  A  ++V +E  P FL  L
Sbjct: 28  FIACPQLARTVQRCLQAGSGPQPVVLECAPGPGVLTRTLL-NAGVRVVALESHPAFLSKL 86

Query: 494 ELLADLVE 517
           + L + ++
Sbjct: 87  QSLENSLD 94


>UniRef50_A0HAD5 Cluster: Phospholipid N-methyltransferase-like;
           n=1; Comamonas testosteroni KF-1|Rep: Phospholipid
           N-methyltransferase-like - Comamonas testosteroni KF-1
          Length = 185

 Score = 35.1 bits (77), Expect = 1.7
 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
 Frame = +2

Query: 290 LRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQ--APKKLVLI 463
           +R+ RE+        RL + +    G      V E+G G G IT S++R   AP +LV+I
Sbjct: 15  IRSPREIGALCPSSARLGNTMASLVGGGDEGLVVELGAGTGVITESLLRSGIAPGRLVII 74

Query: 464 EKDPRF 481
           EK   F
Sbjct: 75  EKSSSF 80


>UniRef50_Q5ENQ8 Cluster: Chloroplast dimethyladenosine synthase;
           n=1; Heterocapsa triquetra|Rep: Chloroplast
           dimethyladenosine synthase - Heterocapsa triquetra
           (Dinoflagellate)
          Length = 395

 Score = 35.1 bits (77), Expect = 1.7
 Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
 Frame = +2

Query: 302 RELSQNFLMEPRLIDKIVRA--SGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDP 475
           + LSQNFL +P  + K+V A    +     V E+GPG G +T  +  + P +++ ++ D 
Sbjct: 114 QSLSQNFLADPNYVFKMVNAIEDDSPGGKQVLELGPGTGALTSRLHPRFP-EMMAVDLDQ 172

Query: 476 R 478
           R
Sbjct: 173 R 173


>UniRef50_Q0UUN9 Cluster: Predicted protein; n=4;
           Pezizomycotina|Rep: Predicted protein - Phaeosphaeria
           nodorum (Septoria nodorum)
          Length = 93

 Score = 35.1 bits (77), Expect = 1.7
 Identities = 15/31 (48%), Positives = 22/31 (70%)
 Frame = +1

Query: 85  RNRLTGFTIGAGVLGVYLYSIFAIKQETFLD 177
           +N +TGF I + V+G+Y Y+I AI Q+ F D
Sbjct: 31  KNTITGFAICSLVIGIYTYTINAISQDEFED 61


>UniRef50_Q62MM2 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=72; Proteobacteria|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Burkholderia mallei (Pseudomonas
           mallei)
          Length = 275

 Score = 35.1 bits (77), Expect = 1.7
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = +2

Query: 296 ALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSII 433
           A +   QNFL++  +ID IV A    +   + E+GPG G +T  +I
Sbjct: 12  ARKRFGQNFLVDHGVIDAIVAAIRPERGERMVEIGPGLGALTGPVI 57


>UniRef50_Q9YEM5 Cluster: Probable dimethyladenosine transferase (EC
           2.1.1.-) (S- adenosylmethionine-6-N',N'-adenosyl(rRNA)
           dimethyltransferase); n=1; Aeropyrum pernix|Rep:
           Probable dimethyladenosine transferase (EC 2.1.1.-) (S-
           adenosylmethionine-6-N',N'-adenosyl(rRNA)
           dimethyltransferase) - Aeropyrum pernix
          Length = 277

 Score = 35.1 bits (77), Expect = 1.7
 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
 Frame = +2

Query: 263 IKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTV---CEVGPGPGGITRSII 433
           +++V+ L  LR    L Q+FL++ R + + ++         +    E+GPG G IT    
Sbjct: 17  VREVLGLAGLRPSDRLGQHFLIDDRAVGEFLKPLEKAAAEGIREALEIGPGAGSITLP-A 75

Query: 434 RQAPKKLVLIEKDPRFLPSLELLA 505
            +   ++V +E D R   +L  LA
Sbjct: 76  AEVLDRIVAVELDNRLASALSRLA 99


>UniRef50_Q9VAQ5 Cluster: Probable dimethyladenosine transferase (EC
           2.1.1.-) (S- adenosylmethionine-6-N',N'-adenosyl(rRNA)
           dimethyltransferase); n=11; Fungi/Metazoa group|Rep:
           Probable dimethyladenosine transferase (EC 2.1.1.-) (S-
           adenosylmethionine-6-N',N'-adenosyl(rRNA)
           dimethyltransferase) - Drosophila melanogaster (Fruit
           fly)
          Length = 306

 Score = 35.1 bits (77), Expect = 1.7
 Identities = 18/65 (27%), Positives = 33/65 (50%)
 Frame = +2

Query: 302 RELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPRF 481
           ++  Q+ L  P +I  ++  +       V E+GPG G +T  ++ +A KK++  E D R 
Sbjct: 25  KDFGQHILKNPLVITTMLEKAALRATDVVLEIGPGTGNMTVRMLERA-KKVIACEIDTRL 83

Query: 482 LPSLE 496
              L+
Sbjct: 84  AAELQ 88


>UniRef50_Q1JYS9 Cluster: Dimethyladenosine transferase; n=1;
           Desulfuromonas acetoxidans DSM 684|Rep:
           Dimethyladenosine transferase - Desulfuromonas
           acetoxidans DSM 684
          Length = 263

 Score = 34.7 bits (76), Expect = 2.3
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = +2

Query: 293 RALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSII-RQAPKKLVLIEK 469
           R  +   QNFL +  +I   + A+    +  V E+GPG G +T  +I R A   ++ I++
Sbjct: 5   RPRKRFGQNFLKDKNVIAATIAAAELTGDDHVLEIGPGQGALTDQMIGRVASLDIIEIDR 64

Query: 470 D 472
           D
Sbjct: 65  D 65


>UniRef50_Q5PDD9 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=75; Gammaproteobacteria|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Salmonella paratyphi-a
          Length = 273

 Score = 34.7 bits (76), Expect = 2.3
 Identities = 20/59 (33%), Positives = 30/59 (50%)
 Frame = +2

Query: 296 ALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKD 472
           A +   QNFL +  +ID IV A    +   + E+GPG   +T   + +   KL +IE D
Sbjct: 11  ARKRFGQNFLNDRFVIDSIVSAINPQKGQAMVEIGPGLAALTEP-VGERLDKLTVIELD 68


>UniRef50_Q9ZGI7 Cluster: RRNA methyltransferase PikR2; n=12;
           Actinomycetales|Rep: RRNA methyltransferase PikR2 -
           Streptomyces venezuelae
          Length = 322

 Score = 34.3 bits (75), Expect = 3.0
 Identities = 19/58 (32%), Positives = 31/58 (53%)
 Frame = +2

Query: 305 ELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPR 478
           EL QNFL++  +ID+I       +   + E+GPG G +T  + R   + +  +E D R
Sbjct: 11  ELGQNFLVDRSVIDEIDGLVARTKG-PILEIGPGDGALTLPLSRHG-RPITAVELDGR 66


>UniRef50_A2BNB0 Cluster: Dimethyladenosine transferase; n=1;
           Hyperthermus butylicus DSM 5456|Rep: Dimethyladenosine
           transferase - Hyperthermus butylicus (strain DSM 5456 /
           JCM 9403)
          Length = 251

 Score = 34.3 bits (75), Expect = 3.0
 Identities = 24/68 (35%), Positives = 37/68 (54%)
 Frame = +2

Query: 290 LRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEK 469
           LRA REL Q+FL+  R + +I  A    +   + EVG G G +T +I+R    ++  +E 
Sbjct: 2   LRARRELGQHFLV-ARWVARIF-AGWACRFRRLLEVGVGQGFLTSTILRSCSVEIAGLEL 59

Query: 470 DPRFLPSL 493
           D R +  L
Sbjct: 60  DLRLVGEL 67


>UniRef50_Q7UIR4 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=2; Planctomycetaceae|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Rhodopirellula baltica
          Length = 284

 Score = 34.3 bits (75), Expect = 3.0
 Identities = 22/78 (28%), Positives = 38/78 (48%)
 Frame = +2

Query: 290 LRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEK 469
           +R + +  QNFL++  L++ I R++    +  V E+G G G +T  +  QA   L +   
Sbjct: 1   MRPVSKYGQNFLIDLNLVELIARSAEIGPSDIVLEIGTGVGSLTSIMASQAGAILTVEID 60

Query: 470 DPRFLPSLELLADLVEIK 523
              F  + E LA    +K
Sbjct: 61  QNLFQLASEELAPFPHVK 78


>UniRef50_Q391A1 Cluster: Phospholipid N-methyltransferase-like;
           n=7; Burkholderia cepacia complex|Rep: Phospholipid
           N-methyltransferase-like - Burkholderia sp. (strain 383)
           (Burkholderia cepacia (strain ATCC 17760/ NCIB 9086 /
           R18194))
          Length = 196

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 15/38 (39%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
 Frame = +2

Query: 386 VCEVGPGPGGITRSIIRQ--APKKLVLIEKDPRFLPSL 493
           V E+G G G IT +++ +  AP++LV++E+ P F+  L
Sbjct: 49  VVELGGGTGAITAALLERGVAPRRLVVVERSPAFVQHL 86


>UniRef50_Q1NNF3 Cluster: Putative uncharacterized protein; n=1;
           delta proteobacterium MLMS-1|Rep: Putative
           uncharacterized protein - delta proteobacterium MLMS-1
          Length = 192

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
 Frame = +2

Query: 317 NFLMEPRLIDK-IVRASGNIQNHTVCEVGPGPGGITRSII--RQAPKKLVLIEKDPRFLP 487
           +F+   R +++ +VR     Q   V E+GPG GG T++I+   Q   +L+ IE  P F+ 
Sbjct: 27  SFVPSSRFLERRLVRYCEIEQAKLVVELGPGTGGTTQAILDAMQPEARLLSIEITPEFVE 86

Query: 488 SLELLAD 508
            L+  +D
Sbjct: 87  VLQRHSD 93


>UniRef50_A6GDM4 Cluster: Dimethyladenosine transferase; n=1;
           Plesiocystis pacifica SIR-1|Rep: Dimethyladenosine
           transferase - Plesiocystis pacifica SIR-1
          Length = 301

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 23/74 (31%), Positives = 38/74 (51%)
 Frame = +2

Query: 251 SIPSIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSI 430
           +IPS K ++  + L   +   QNFL    +  +I  A+G     TV E+G G G +T  +
Sbjct: 7   AIPSPKQLLARHGLAPRKSWGQNFLHAFEVHLEIAAAAGAGPGSTVVEIGAGLGTLTAHL 66

Query: 431 IRQAPKKLVLIEKD 472
           +  A  ++  IE+D
Sbjct: 67  L-AAGAEVDAIERD 79


>UniRef50_P10738 Cluster: rRNA adenine N-6-methyltransferase; n=148;
           root|Rep: rRNA adenine N-6-methyltransferase -
           Escherichia coli
          Length = 245

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 17/54 (31%), Positives = 31/54 (57%)
 Frame = +2

Query: 311 SQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKD 472
           SQNFL   +++++I++     +  TV E+G G G +T  + +   K++  IE D
Sbjct: 8   SQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAK-ISKQVTSIELD 60


>UniRef50_Q5FNE6 Cluster: Na+/H+ antiporter; n=1; Gluconobacter
           oxydans|Rep: Na+/H+ antiporter - Gluconobacter oxydans
           (Gluconobacter suboxydans)
          Length = 254

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
 Frame = -3

Query: 280 FDDILDA-----WYGGSLICNAVLATAMITAVFSGARRNRQGT 167
           FDD+L       +YGGS+   A+LA  ++TA   GA R  Q T
Sbjct: 169 FDDVLGIVVIALFYGGSMYWPALLAVVLVTAALIGANRQDQNT 211


>UniRef50_Q3IPP8 Cluster: Homolog 1 to
           S-adenosylmethionine-dependent methyltransferase 3; n=1;
           Natronomonas pharaonis DSM 2160|Rep: Homolog 1 to
           S-adenosylmethionine-dependent methyltransferase 3 -
           Natronomonas pharaonis (strain DSM 2160 / ATCC 35678)
          Length = 196

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = +2

Query: 353 VRASGNIQNHTVCEVGPGPGGITRSIIRQA-PKKLVLIEKDPRFLPSLELLADLVEIKSM 529
           +R  G    HT+ EVG G G       R   P  +  ++ DP  L +L  LAD   IK++
Sbjct: 26  LRKCGLSSGHTLAEVGSGNGYFALPAARIVDPAPVYAVDVDPSLLEALAHLADQQNIKNI 85

Query: 530 LTL 538
            T+
Sbjct: 86  ETV 88


>UniRef50_Q121Q5 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=1; Polaromonas sp. JS666|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Polaromonas sp. (strain JS666 /
           ATCC BAA-500)
          Length = 330

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 20/75 (26%), Positives = 35/75 (46%)
 Frame = +2

Query: 302 RELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPRF 481
           +   Q+FL +  +I+ IV+A        V E+GPG   +T+ ++ +    L +IE D   
Sbjct: 24  KRFGQHFLTDQGIIEGIVQAIAPRAGQAVVEIGPGLAALTQPLVERL-GHLTVIELDRDL 82

Query: 482 LPSLELLADLVEIKS 526
              L     L  ++S
Sbjct: 83  AQQLRAHPQLTVVES 97


>UniRef50_Q39GE3 Cluster: Ribosomal RNA adenine methylase
           transferase; n=16; Burkholderia|Rep: Ribosomal RNA
           adenine methylase transferase - Burkholderia sp. (strain
           383) (Burkholderia cepacia (strain ATCC 17760/ NCIB 9086
           / R18194))
          Length = 238

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
 Frame = +2

Query: 383 TVCEVGPGPGGITRSIIRQ--APKKLVLIEKDPRFLPSL 493
           TV E+G G G  TR+++ +  A  +LVL+E DP F  +L
Sbjct: 44  TVIELGAGTGVFTRALLARGVASDRLVLVEADPAFANTL 82


>UniRef50_Q1MYH8 Cluster: Transcriptional regulator, ArsR family
           protein; n=1; Oceanobacter sp. RED65|Rep:
           Transcriptional regulator, ArsR family protein -
           Oceanobacter sp. RED65
          Length = 337

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +2

Query: 341 IDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPRFL 484
           +D+I++  G     TV EVGPG GG  +  + Q  ++++ ++  P  L
Sbjct: 158 LDEIIQTLGLESRSTVMEVGPGQGGFLKP-LSQRYERVIALDNSPAML 204


>UniRef50_A5E8J6 Cluster: Phospholipid N-methyltransferase; n=14;
           Alphaproteobacteria|Rep: Phospholipid
           N-methyltransferase - Bradyrhizobium sp. (strain BTAi1 /
           ATCC BAA-1182)
          Length = 200

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
 Frame = +2

Query: 386 VCEVGPGPGGITRSIIRQA--PKKLVLIEKDPRF 481
           V E+GPG G IT ++++     K+LVL+E +P F
Sbjct: 59  VIELGPGTGAITNALVQHGIDQKRLVLVEYNPGF 92


>UniRef50_A3I4Y3 Cluster: Acetoin dehydrogenase, E3 component,
           dihydrolipoamide dehydrogenase; n=1; Bacillus sp.
           B14905|Rep: Acetoin dehydrogenase, E3 component,
           dihydrolipoamide dehydrogenase - Bacillus sp. B14905
          Length = 461

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +2

Query: 344 DKIVRASGNIQNHTVCEVGPGPGGITRSI-IRQAPKKLVLIEKD 472
           DK++    N++N  +  +G GPGG   +I   +  K++ LIE+D
Sbjct: 8   DKVLHEVRNMENFDIAIIGAGPGGYVAAIHAAKNGKRVALIERD 51


>UniRef50_O25972 Cluster: Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase); n=4; Helicobacter|Rep:
           Dimethyladenosine transferase (EC 2.1.1.-)
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) - Helicobacter pylori
           (Campylobacter pylori)
          Length = 271

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 17/57 (29%), Positives = 30/57 (52%)
 Frame = +2

Query: 296 ALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIE 466
           A + L Q+FL +   +D+IV A   +    + E+G G G +T  ++ + P K   I+
Sbjct: 4   AKKSLGQHFLTDESFLDRIVNALPPLNPLKLVEIGVGLGDLTLKLLDRYPLKTYEID 60


>UniRef50_UPI00005851F1 Cluster: PREDICTED: similar to chondroitin
           4-sulfotransferase-2, partial; n=1; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to chondroitin
           4-sulfotransferase-2, partial - Strongylocentrotus
           purpuratus
          Length = 277

 Score = 32.7 bits (71), Expect = 9.1
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +2

Query: 605 WIPPSTSSPHWAIYHLACLPILILKDGLG 691
           ++ P  ++PHW  Y+  CLP L+  D +G
Sbjct: 195 YLSPINNNPHWREYYRLCLPCLVSYDFIG 223


>UniRef50_A7AJ09 Cluster: Putative uncharacterized protein; n=1;
           Parabacteroides merdae ATCC 43184|Rep: Putative
           uncharacterized protein - Parabacteroides merdae ATCC
           43184
          Length = 290

 Score = 32.7 bits (71), Expect = 9.1
 Identities = 17/65 (26%), Positives = 35/65 (53%)
 Frame = +2

Query: 302 RELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPRF 481
           + L Q+FL + ++ ++I     + +   V E+GPG G +T+ ++ +    L ++E D   
Sbjct: 37  KALGQHFLKDLQIAERIADTLSDYKQLPVLEIGPGMGVLTQFLLEKG-HDLTVVELDMES 95

Query: 482 LPSLE 496
           +  LE
Sbjct: 96  VDYLE 100


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 734,324,637
Number of Sequences: 1657284
Number of extensions: 15122050
Number of successful extensions: 39382
Number of sequences better than 10.0: 191
Number of HSP's better than 10.0 without gapping: 38052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39359
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56611575523
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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