Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30900
         (708 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   5.6  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   7.4  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   9.8  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   9.8  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   9.8  

>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -1

Query: 417 IPPGPGPTSQTV*F*ILPEARTILSISL 334
           +P G GP +    F I+P  +T++ I +
Sbjct: 415 MPFGVGPRNCIAKFDIVPNGKTVIPIKI 442


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = -3

Query: 262 AWYGGSLICNAV 227
           AWY G+++C  +
Sbjct: 111 AWYAGNVLCKII 122


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -2

Query: 566 KSVFKISPVIMSTSTLSRQDRLK 498
           K   K  PVI+ TSTL++++ L+
Sbjct: 412 KKAGKEIPVILWTSTLTQKEYLE 434


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 274 DILDAWYGGSLICNAV 227
           DI   +YGG L+C  V
Sbjct: 101 DITYRFYGGFLLCKVV 116


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +3

Query: 279 NSTNYALYESCHRIFSWNRDLLTK*CVPQVIFRII 383
           N  NY   + C+ +     DLL   C+ + IF I+
Sbjct: 45  NGLNYNFTKKCYFLRMVLIDLLIVGCILKHIFNIL 79


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,767
Number of Sequences: 336
Number of extensions: 3896
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)