Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30900
(708 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF151833-1|AAD34070.1| 346|Homo sapiens CGI-75 protein protein. 107 4e-23
BC017788-1|AAH17788.1| 346|Homo sapiens transcription factor B1... 107 5e-23
BC005183-1|AAH05183.1| 341|Homo sapiens Unknown (protein for IM... 107 5e-23
AL139101-2|CAI20506.1| 346|Homo sapiens transcription factor B1... 107 5e-23
BC010874-1|AAH10874.1| 313|Homo sapiens DIM1 dimethyladenosine ... 42 0.002
BC002841-1|AAH02841.1| 275|Homo sapiens DIMT1L protein protein. 42 0.002
AF102147-1|AAC97955.1| 313|Homo sapiens putative dimethyladenos... 42 0.002
BC002698-1|AAH02698.1| 106|Homo sapiens coiled-coil domain cont... 41 0.004
>AF151833-1|AAD34070.1| 346|Homo sapiens CGI-75 protein protein.
Length = 346
Score = 107 bits (257), Expect = 4e-23
Identities = 49/91 (53%), Positives = 70/91 (76%)
Frame = +2
Query: 236 TDKAASIPSIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGG 415
T + +P+I+++IKL +L+A ELSQNFL++ RL DKIVR +GN+ N V EVGPGPGG
Sbjct: 9 TCRLPPLPTIREIIKLLRLQAANELSQNFLLDLRLTDKIVRKAGNLTNAYVYEVGPGPGG 68
Query: 416 ITRSIIRQAPKKLVLIEKDPRFLPSLELLAD 508
ITRSI+ +L+++EKD RF+P L++L+D
Sbjct: 69 ITRSILNADVAELLVVEKDTRFIPGLQMLSD 99
>BC017788-1|AAH17788.1| 346|Homo sapiens transcription factor B1,
mitochondrial protein.
Length = 346
Score = 107 bits (256), Expect = 5e-23
Identities = 48/91 (52%), Positives = 71/91 (78%)
Frame = +2
Query: 236 TDKAASIPSIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGG 415
T + +P+I+++IKL +L+A ++LSQNFL++ RL DKIVR +GN+ N V EVGPGPGG
Sbjct: 9 TCRLPPLPTIREIIKLLRLQAAKQLSQNFLLDLRLTDKIVRKAGNLTNAYVYEVGPGPGG 68
Query: 416 ITRSIIRQAPKKLVLIEKDPRFLPSLELLAD 508
ITRSI+ +L+++EKD RF+P L++L+D
Sbjct: 69 ITRSILNADVAELLVVEKDTRFIPGLQMLSD 99
>BC005183-1|AAH05183.1| 341|Homo sapiens Unknown (protein for
IMAGE:4041141) protein.
Length = 341
Score = 107 bits (256), Expect = 5e-23
Identities = 48/91 (52%), Positives = 71/91 (78%)
Frame = +2
Query: 236 TDKAASIPSIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGG 415
T + +P+I+++IKL +L+A ++LSQNFL++ RL DKIVR +GN+ N V EVGPGPGG
Sbjct: 9 TCRLPPLPTIREIIKLLRLQAAKQLSQNFLLDLRLTDKIVRKAGNLTNAYVYEVGPGPGG 68
Query: 416 ITRSIIRQAPKKLVLIEKDPRFLPSLELLAD 508
ITRSI+ +L+++EKD RF+P L++L+D
Sbjct: 69 ITRSILNADVAELLVVEKDTRFIPGLQMLSD 99
>AL139101-2|CAI20506.1| 346|Homo sapiens transcription factor B1,
mitochondrial protein.
Length = 346
Score = 107 bits (256), Expect = 5e-23
Identities = 48/91 (52%), Positives = 71/91 (78%)
Frame = +2
Query: 236 TDKAASIPSIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGG 415
T + +P+I+++IKL +L+A ++LSQNFL++ RL DKIVR +GN+ N V EVGPGPGG
Sbjct: 9 TCRLPPLPTIREIIKLLRLQAAKQLSQNFLLDLRLTDKIVRKAGNLTNAYVYEVGPGPGG 68
Query: 416 ITRSIIRQAPKKLVLIEKDPRFLPSLELLAD 508
ITRSI+ +L+++EKD RF+P L++L+D
Sbjct: 69 ITRSILNADVAELLVVEKDTRFIPGLQMLSD 99
>BC010874-1|AAH10874.1| 313|Homo sapiens DIM1 dimethyladenosine
transferase 1-like (S. cerevisiae) protein.
Length = 313
Score = 42.3 bits (95), Expect = 0.002
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +2
Query: 308 LSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPRFLP 487
+ Q+ L P +I+ I+ + V EVGPG G +T ++ +A KK+V E DPR +
Sbjct: 34 IGQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKA-KKVVACELDPRLVA 92
Query: 488 SL 493
L
Sbjct: 93 EL 94
>BC002841-1|AAH02841.1| 275|Homo sapiens DIMT1L protein protein.
Length = 275
Score = 42.3 bits (95), Expect = 0.002
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +2
Query: 308 LSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPRFLP 487
+ Q+ L P +I+ I+ + V EVGPG G +T ++ +A KK+V E DPR +
Sbjct: 34 IGQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKA-KKVVACELDPRLVA 92
Query: 488 SL 493
L
Sbjct: 93 EL 94
>AF102147-1|AAC97955.1| 313|Homo sapiens putative dimethyladenosine
transferase protein.
Length = 313
Score = 42.3 bits (95), Expect = 0.002
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +2
Query: 308 LSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPRFLP 487
+ Q+ L P +I+ I+ + V EVGPG G +T ++ +A KK+V E DPR +
Sbjct: 34 IGQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKA-KKVVACELDPRLVA 92
Query: 488 SL 493
L
Sbjct: 93 EL 94
>BC002698-1|AAH02698.1| 106|Homo sapiens coiled-coil domain
containing 56 protein.
Length = 106
Score = 41.1 bits (92), Expect = 0.004
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = +1
Query: 85 RNRLTGFTIGAGVLGVYLYSIFAIKQETFLDDFDEPPK 198
RN +TG IGA VL +Y Y+ ++I QE FLD+ ++ K
Sbjct: 56 RNIVTGLGIGALVLAIYGYTFYSISQERFLDELEDEAK 93
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,609,782
Number of Sequences: 237096
Number of extensions: 2209071
Number of successful extensions: 5184
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5184
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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