Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30900
         (708 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069635-1|AAL39780.1|  330|Drosophila melanogaster LD40326p pro...   107   1e-23
AE014296-2014|AAF50022.2|  330|Drosophila melanogaster CG7319-PA...   107   1e-23
AE014296-2013|AAS65037.1|  518|Drosophila melanogaster CG7319-PC...   107   1e-23
AY061429-1|AAL28977.1|  306|Drosophila melanogaster LD35950p pro...    35   0.094
AE014297-4308|AAF56847.1|  306|Drosophila melanogaster CG11837-P...    35   0.094
AY070613-1|AAL48084.1|  995|Drosophila melanogaster RE71565p pro...    29   4.7  
AE013599-2173|AAF58067.2|  995|Drosophila melanogaster CG8414-PA...    29   4.7  
BT001597-1|AAN71352.1| 1047|Drosophila melanogaster RE29416p pro...    29   8.2  
AE014296-779|AAF47850.1| 1047|Drosophila melanogaster CG15002-PB...    29   8.2  

>AY069635-1|AAL39780.1|  330|Drosophila melanogaster LD40326p
           protein.
          Length = 330

 Score =  107 bits (258), Expect = 1e-23
 Identities = 49/86 (56%), Positives = 72/86 (83%), Gaps = 1/86 (1%)
 Frame = +2

Query: 254 IPSIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQ-NHTVCEVGPGPGGITRSI 430
           +P+I++++KLY+L+A ++LSQNFLM+ RL DKIV+++G I     V EVGPGPGGITRSI
Sbjct: 18  MPTIRELVKLYRLQARKQLSQNFLMDERLTDKIVKSAGRIDPRDLVLEVGPGPGGITRSI 77

Query: 431 IRQAPKKLVLIEKDPRFLPSLELLAD 508
           +R+ P++L+L+EKDPRF  +L+LL +
Sbjct: 78  LRRHPQRLLLVEKDPRFGETLQLLKE 103


>AE014296-2014|AAF50022.2|  330|Drosophila melanogaster CG7319-PA,
           isoform A protein.
          Length = 330

 Score =  107 bits (258), Expect = 1e-23
 Identities = 49/86 (56%), Positives = 72/86 (83%), Gaps = 1/86 (1%)
 Frame = +2

Query: 254 IPSIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQ-NHTVCEVGPGPGGITRSI 430
           +P+I++++KLY+L+A ++LSQNFLM+ RL DKIV+++G I     V EVGPGPGGITRSI
Sbjct: 18  MPTIRELVKLYRLQARKQLSQNFLMDERLTDKIVKSAGRIDPRDLVLEVGPGPGGITRSI 77

Query: 431 IRQAPKKLVLIEKDPRFLPSLELLAD 508
           +R+ P++L+L+EKDPRF  +L+LL +
Sbjct: 78  LRRHPQRLLLVEKDPRFGETLQLLKE 103


>AE014296-2013|AAS65037.1|  518|Drosophila melanogaster CG7319-PC,
           isoform C protein.
          Length = 518

 Score =  107 bits (258), Expect = 1e-23
 Identities = 49/86 (56%), Positives = 72/86 (83%), Gaps = 1/86 (1%)
 Frame = +2

Query: 254 IPSIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQ-NHTVCEVGPGPGGITRSI 430
           +P+I++++KLY+L+A ++LSQNFLM+ RL DKIV+++G I     V EVGPGPGGITRSI
Sbjct: 206 MPTIRELVKLYRLQARKQLSQNFLMDERLTDKIVKSAGRIDPRDLVLEVGPGPGGITRSI 265

Query: 431 IRQAPKKLVLIEKDPRFLPSLELLAD 508
           +R+ P++L+L+EKDPRF  +L+LL +
Sbjct: 266 LRRHPQRLLLVEKDPRFGETLQLLKE 291



 Score = 81.8 bits (193), Expect = 8e-16
 Identities = 37/69 (53%), Positives = 52/69 (75%)
 Frame = +1

Query: 1   LKQAEIAYMKLIEERNRERVQKLQVISKRNRLTGFTIGAGVLGVYLYSIFAIKQETFLDD 180
           L +A++ +MKLIEE+N +RVQKL+ I + N LT   +G  VL +Y YSIF+++QE FLDD
Sbjct: 123 LDKAQLQFMKLIEEQNLDRVQKLKRIRRNNLLTAGALGVSVLAIYGYSIFSVQQEKFLDD 182

Query: 181 FDEPPKIQQ 207
           F+EP K+ Q
Sbjct: 183 FEEPKKMAQ 191


>AY061429-1|AAL28977.1|  306|Drosophila melanogaster LD35950p
           protein.
          Length = 306

 Score = 35.1 bits (77), Expect = 0.094
 Identities = 18/65 (27%), Positives = 33/65 (50%)
 Frame = +2

Query: 302 RELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPRF 481
           ++  Q+ L  P +I  ++  +       V E+GPG G +T  ++ +A KK++  E D R 
Sbjct: 25  KDFGQHILKNPLVITTMLEKAALRATDVVLEIGPGTGNMTVRMLERA-KKVIACEIDTRL 83

Query: 482 LPSLE 496
              L+
Sbjct: 84  AAELQ 88


>AE014297-4308|AAF56847.1|  306|Drosophila melanogaster CG11837-PA
           protein.
          Length = 306

 Score = 35.1 bits (77), Expect = 0.094
 Identities = 18/65 (27%), Positives = 33/65 (50%)
 Frame = +2

Query: 302 RELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPRF 481
           ++  Q+ L  P +I  ++  +       V E+GPG G +T  ++ +A KK++  E D R 
Sbjct: 25  KDFGQHILKNPLVITTMLEKAALRATDVVLEIGPGTGNMTVRMLERA-KKVIACEIDTRL 83

Query: 482 LPSLE 496
              L+
Sbjct: 84  AAELQ 88


>AY070613-1|AAL48084.1|  995|Drosophila melanogaster RE71565p protein.
          Length = 995

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
 Frame = +2

Query: 116  PECWVFTCILSSPSNRRRSLTISTSPRKYSSNHGRR*NCITDKAASIPSIKDV-IKLYKL 292
            P+  +   I + P+  + + ++S    +YS+   R  +C+T  A S+   + + + L  L
Sbjct: 809  PKYTLHKLISAVPAREKGTWSLSAKDMRYSNLLARLSSCLTGNAKSLTDCQPLGVSLESL 868

Query: 293  RALRELSQNFLME 331
            + L   S+N+  E
Sbjct: 869  KILHPTSKNYSRE 881


>AE013599-2173|AAF58067.2|  995|Drosophila melanogaster CG8414-PA
            protein.
          Length = 995

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
 Frame = +2

Query: 116  PECWVFTCILSSPSNRRRSLTISTSPRKYSSNHGRR*NCITDKAASIPSIKDV-IKLYKL 292
            P+  +   I + P+  + + ++S    +YS+   R  +C+T  A S+   + + + L  L
Sbjct: 809  PKYTLHKLISAVPAREKGTWSLSAKDMRYSNLLARLSSCLTGNAKSLTDCQPLGVSLESL 868

Query: 293  RALRELSQNFLME 331
            + L   S+N+  E
Sbjct: 869  KILHPTSKNYSRE 881


>BT001597-1|AAN71352.1| 1047|Drosophila melanogaster RE29416p
           protein.
          Length = 1047

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = -2

Query: 230 SFSDGHDYCCIFGGSSKSSRNVSCLMAKIEYK*TPNTPAPIVKPVS 93
           +F  G + CC+ GG+S+++ +      K   K  P   A   +P S
Sbjct: 364 AFCPGEESCCVTGGASEATPSSKAPPTKPAIKHAPKPAAKPARPAS 409


>AE014296-779|AAF47850.1| 1047|Drosophila melanogaster CG15002-PB
           protein.
          Length = 1047

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = -2

Query: 230 SFSDGHDYCCIFGGSSKSSRNVSCLMAKIEYK*TPNTPAPIVKPVS 93
           +F  G + CC+ GG+S+++ +      K   K  P   A   +P S
Sbjct: 364 AFCPGEESCCVTGGASEATPSSKAPPTKPAIKHAPKPAAKPARPAS 409


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,693,178
Number of Sequences: 53049
Number of extensions: 700649
Number of successful extensions: 1714
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1708
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)