Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30899
         (390 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   2.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    20   10.0 
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    20   10.0 

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 158 FWPQSRLDLKRAM 196
           FW QS LDL R +
Sbjct: 450 FWQQSDLDLSRGL 462


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 19.8 bits (39), Expect = 10.0
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +1

Query: 22  YNQFHSHVFQGIKFCDIF*DKLPSCLG*IYYSAL 123
           Y+ +   VF  ++    F   L SCL  +YY  L
Sbjct: 151 YSTYGIQVFGTMQRTSFFKTFLNSCLMDVYYEFL 184


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 19.8 bits (39), Expect = 10.0
 Identities = 5/16 (31%), Positives = 10/16 (62%)
 Frame = -2

Query: 278 WLMFMSVTVCNTMLWD 231
           WL F++  + N + W+
Sbjct: 243 WLFFLANFLTNLLFWE 258


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,312
Number of Sequences: 336
Number of extensions: 1401
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8225022
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)