Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30898
         (718 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    27   0.15 
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    24   1.4  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   3.3  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   5.7  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   5.7  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   7.6  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   7.6  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   7.6  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   7.6  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +3

Query: 117 LSLQTCTRAPNNY 155
           ++LQTC R PNNY
Sbjct: 510 INLQTCVRCPNNY 522



 Score = 25.4 bits (53), Expect = 0.46
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -3

Query: 425 SFEDTTLLNKQNISHQSMLFNLKAKNSLFIGFKVIFFIS 309
           +F+D   +N  NI     +FN K KN      K  FF+S
Sbjct: 198 TFDDA--INNNNIELYKEIFNGKRKNPNGCDIKATFFVS 234


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 144 PNNYNLYCSLIRRGFYKMIGRTI 212
           P  YN+  S  R GF+K+ G  I
Sbjct: 350 PILYNIISSKFRSGFFKLCGMKI 372


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 700 LISKHFFNTNPTRTRSN 650
           L+ K  +  NPT+TR+N
Sbjct: 360 LLIKGVYQVNPTKTRTN 376


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -2

Query: 684 FLTLTLLEPDQMNFFHASTNSIVKWY 607
           +L  TL    QM  FH  ++  + WY
Sbjct: 176 WLGATLCSIPQMVVFHVESHPNITWY 201


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -2

Query: 684 FLTLTLLEPDQMNFFHASTNSIVKWY 607
           +L  TL    QM  FH  ++  + WY
Sbjct: 176 WLGATLCSIPQMVVFHVESHPNITWY 201


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +3

Query: 117 LSLQTCTRAPNNY 155
           L L TC   PNNY
Sbjct: 501 LRLFTCMECPNNY 513


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +3

Query: 117 LSLQTCTRAPNNY 155
           L L TC   PNNY
Sbjct: 508 LRLFTCMECPNNY 520


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 345 SFYWL*GDFFYFIT 304
           SFY+    FFYF T
Sbjct: 238 SFYFFISTFFYFFT 251


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 345 SFYWL*GDFFYFIT 304
           SFY+    FFYF T
Sbjct: 234 SFYFFISTFFYFFT 247


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,551
Number of Sequences: 336
Number of extensions: 2976
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)