Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30897
(800 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;... 151 2e-35
UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11; ... 149 6e-35
UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3; M... 149 1e-34
UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27... 133 4e-30
UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10... 132 1e-29
UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2; D... 115 2e-24
UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;... 108 2e-22
UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12; ... 101 3e-20
UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14; ... 98 2e-19
UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1; E... 97 3e-19
UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6; P... 97 6e-19
UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1; E... 97 6e-19
UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4; E... 96 1e-18
UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2; T... 87 4e-16
UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1; G... 85 2e-15
UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6; T... 85 2e-15
UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=... 73 8e-12
UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protei... 73 1e-11
UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyc... 72 1e-11
UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1; G... 68 2e-10
UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiell... 68 3e-10
UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum... 66 1e-09
UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum... 65 2e-09
UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=... 65 2e-09
UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus ... 59 1e-07
UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga ... 59 1e-07
UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339... 59 1e-07
UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1; Staphylothe... 57 4e-07
UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1; ... 56 8e-07
UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=... 55 2e-06
UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2; ... 55 2e-06
UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, wh... 54 3e-06
UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;... 54 4e-06
UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1; Methan... 52 1e-05
UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=... 50 7e-05
UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=... 48 4e-04
UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=... 47 5e-04
UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4; Methanomicr... 46 0.001
UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:... 45 0.002
UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=... 45 0.002
UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole geno... 44 0.003
UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1; uncul... 42 0.018
UniRef50_Q9Y9W8 Cluster: Acidic ribosomal protein P0 homolog; n=... 41 0.042
UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lambl... 40 0.073
UniRef50_Q9UKD2 Cluster: mRNA turnover protein 4 homolog; n=30; ... 38 0.29
UniRef50_Q9VQB9 Cluster: CG3557-PA; n=1; Drosophila melanogaster... 38 0.39
UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=... 37 0.68
UniRef50_Q4Q0U9 Cluster: 60S acidic ribosomal protein, putative;... 36 0.90
UniRef50_A7T9I2 Cluster: Predicted protein; n=1; Nematostella ve... 35 2.1
UniRef50_A7S712 Cluster: Predicted protein; n=1; Nematostella ve... 35 2.1
UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma j... 35 2.7
UniRef50_Q84CM8 Cluster: Putative fimbrial adhesin protein; n=3;... 34 3.6
UniRef50_P12021 Cluster: Apomucin; n=9; Amniota|Rep: Apomucin - ... 34 4.8
UniRef50_UPI00015B4FCF Cluster: PREDICTED: hypothetical protein;... 33 6.3
UniRef50_UPI00006D0E10 Cluster: hypothetical protein TTHERM_0007... 33 6.3
UniRef50_UPI000023E460 Cluster: hypothetical protein FG04875.1; ... 33 8.4
>UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo
sapiens (Human)
Length = 317
Score = 151 bits (367), Expect = 2e-35
Identities = 76/125 (60%), Positives = 93/125 (74%), Gaps = 1/125 (0%)
Frame = +1
Query: 256 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 435
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 436 LNISPFSYGLVVKQVYDSGTIFAPEFWDIKPEDLRAKFQAG-SC*CSCSFLLGYWLPQLI 612
LNISPFS+GLV++QV+D+G+I+ PE DI E L ++F G S +GY +
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGY---PTV 234
Query: 613 ASAPH 627
AS PH
Sbjct: 235 ASVPH 239
Score = 148 bits (359), Expect = 1e-34
Identities = 69/92 (75%), Positives = 80/92 (86%)
Frame = +2
Query: 2 DNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTR 181
DNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+
Sbjct: 33 DNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTK 92
Query: 182 GDLVEVRDKLLENKVQAPARPGAIAHCQSSFP 277
DL E+RD LL NKV A AR GAIA C+ + P
Sbjct: 93 EDLTEIRDMLLANKVPAAARAGAIAPCEVTVP 124
>UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 319
Score = 149 bits (362), Expect = 6e-35
Identities = 78/128 (60%), Positives = 95/128 (74%), Gaps = 4/128 (3%)
Frame = +1
Query: 256 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATL--- 426
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++KPGDKVGASEATL
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKPGDKVGASEATLLNM 177
Query: 427 LNMLNISPFSYGLVVKQVYDSGTIFAPEFWDIKPEDLRAKFQAG-SC*CSCSFLLGYWLP 603
LNMLNISPFSYGL+++QVYD+G++++PE DI + L +F G S +GY P
Sbjct: 178 LNMLNISPFSYGLIIQQVYDNGSVYSPEVLDITEDALHKRFLKGVRNIASVCLQIGY--P 235
Query: 604 QLIASAPH 627
L AS PH
Sbjct: 236 TL-ASIPH 242
Score = 145 bits (351), Expect = 1e-33
Identities = 68/92 (73%), Positives = 79/92 (85%)
Frame = +2
Query: 2 DNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTR 181
DNVGS+QMQ IR+SLRG ++VLMGKNTMMRKAI+ HL+NNPALE+LLPHI+GNVGFVFT+
Sbjct: 33 DNVGSKQMQTIRLSLRGKAVVLMGKNTMMRKAIRGHLENNPALERLLPHIRGNVGFVFTK 92
Query: 182 GDLVEVRDKLLENKVQAPARPGAIAHCQSSFP 277
DL EVRD LL NKV A AR GAIA C+ + P
Sbjct: 93 EDLTEVRDLLLANKVPAAARAGAIAPCEVTVP 124
>UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3;
Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites
domuncula (Sponge)
Length = 313
Score = 149 bits (360), Expect = 1e-34
Identities = 74/125 (59%), Positives = 94/125 (75%), Gaps = 1/125 (0%)
Frame = +1
Query: 256 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 435
P+ V +PA NTGLGPEKTSFFQALSI TKIS+GTIEI+++VH++K G+KVGASEATLL M
Sbjct: 118 PVDVFVPASNTGLGPEKTSFFQALSIATKISRGTIEILSEVHLIKIGEKVGASEATLLQM 177
Query: 436 LNISPFSYGLVVKQVYDSGTIFAPEFWDIKPEDLRAKFQAG-SC*CSCSFLLGYWLPQLI 612
L I PF+YGL + QVYDSG++FAP DI +DL +F +G + + S +GY +
Sbjct: 178 LKIFPFTYGLKIVQVYDSGSVFAPSILDITEDDLIKQFMSGLANVAAVSLQIGY---PTV 234
Query: 613 ASAPH 627
AS PH
Sbjct: 235 ASVPH 239
Score = 127 bits (307), Expect = 3e-28
Identities = 56/85 (65%), Positives = 73/85 (85%)
Frame = +2
Query: 2 DNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTR 181
DNVGS+QMQQIRISLRG + +LMGKNT +RKA++ HL+ NP LEK+LPH+KGN+GFVFT
Sbjct: 33 DNVGSKQMQQIRISLRGKATILMGKNTTIRKALRGHLEQNPNLEKVLPHVKGNIGFVFTH 92
Query: 182 GDLVEVRDKLLENKVQAPARPGAIA 256
D+V++R+ +L N+V APA+ GAIA
Sbjct: 93 EDMVDIREIMLSNQVGAPAKAGAIA 117
>UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27;
Eukaryota|Rep: 60S acidic ribosomal protein P0-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 317
Score = 133 bits (322), Expect = 4e-30
Identities = 68/128 (53%), Positives = 88/128 (68%), Gaps = 1/128 (0%)
Frame = +1
Query: 256 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 435
P+ VV+ NTGL P +TSFFQ L+IPTKI+KGT+EII V ++K GDKVG+SEA LL
Sbjct: 121 PIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180
Query: 436 LNISPFSYGLVVKQVYDSGTIFAPEFWDIKPEDLRAKFQAG-SC*CSCSFLLGYWLPQLI 612
L I PFSYGLVV+ VYD+G++F PE ++ +DL KF AG S + S + Y +
Sbjct: 181 LGIRPFSYGLVVESVYDNGSVFNPEVLNLTEDDLVEKFAAGVSMITALSLAISY---PTV 237
Query: 613 ASAPHFHL 636
A+APH L
Sbjct: 238 AAAPHMFL 245
Score = 99.5 bits (237), Expect = 9e-20
Identities = 48/87 (55%), Positives = 64/87 (73%), Gaps = 2/87 (2%)
Frame = +2
Query: 2 DNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLD--NNPALEKLLPHIKGNVGFVF 175
DNVGS Q+Q IR LRG S+VLMGKNTMM+++++ H D N A LLP ++GNVG +F
Sbjct: 34 DNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHADKTGNQAFLSLLPLLQGNVGLIF 93
Query: 176 TRGDLVEVRDKLLENKVQAPARPGAIA 256
T+GDL EV +++ + KV APAR G +A
Sbjct: 94 TKGDLKEVSEEVAKYKVGAPARVGLVA 120
>UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P0-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 323
Score = 132 bits (318), Expect = 1e-29
Identities = 68/128 (53%), Positives = 89/128 (69%), Gaps = 1/128 (0%)
Frame = +1
Query: 256 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 435
P+ VV+ NTGL P +TSFFQ L+IPTKI+KGT+EII V ++K GDKVG+SEA LL
Sbjct: 120 PIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAK 179
Query: 436 LNISPFSYGLVVKQVYDSGTIFAPEFWDIKPEDLRAKFQAG-SC*CSCSFLLGYWLPQLI 612
L I PFSYGLVV+ VYD+G++F+PE D+ + L KF +G S S + + Y P L
Sbjct: 180 LGIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSY--PTL- 236
Query: 613 ASAPHFHL 636
A+APH +
Sbjct: 237 AAAPHMFI 244
Score = 100 bits (240), Expect = 4e-20
Identities = 48/87 (55%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Frame = +2
Query: 2 DNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDN--NPALEKLLPHIKGNVGFVF 175
DNVGS Q+Q IR LRG S+VLMGKNTMM+++++ H +N N A+ LLP ++GNVG +F
Sbjct: 33 DNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHSENSGNTAILNLLPLLQGNVGLIF 92
Query: 176 TRGDLVEVRDKLLENKVQAPARPGAIA 256
T+GDL EV +++ + KV APAR G +A
Sbjct: 93 TKGDLKEVSEEVAKYKVGAPARVGLVA 119
>UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2;
Dictyostelium discoideum|Rep: 60S acidic ribosomal
protein P0 - Dictyostelium discoideum (Slime mold)
Length = 305
Score = 115 bits (276), Expect = 2e-24
Identities = 63/125 (50%), Positives = 81/125 (64%), Gaps = 1/125 (0%)
Frame = +1
Query: 256 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 435
P V+IPA TG+ P +TSF Q L I TKI++G I+I+N+VHI+K G KVGASEATLL
Sbjct: 117 PNDVIIPAGPTGMEPTQTSFLQDLKIATKINRGQIDIVNEVHIIKTGQKVGASEATLLQK 176
Query: 436 LNISPFSYGLVVKQVYDSGTIFAPEFWDIKPEDLRAKFQAGSC-*CSCSFLLGYWLPQLI 612
LNI PF+YGL K +YD+G ++P I EDL KF+ G + S +GY +
Sbjct: 177 LNIKPFTYGLEPKIIYDAGACYSP---SISEEDLINKFKQGIFNIAAISLEIGY---PTV 230
Query: 613 ASAPH 627
AS PH
Sbjct: 231 ASIPH 235
Score = 75.8 bits (178), Expect = 1e-12
Identities = 37/85 (43%), Positives = 54/85 (63%)
Frame = +2
Query: 2 DNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTR 181
D VGS Q+Q+IR S+RG VLMGK TM+RK I+D D+ P L+ L ++K N +F +
Sbjct: 32 DFVGSSQLQKIRKSIRGIGAVLMGKKTMIRKVIRDLADSKPELDALNTYLKQNTCIIFCK 91
Query: 182 GDLVEVRDKLLENKVQAPARPGAIA 256
++ EV+ + +V APA+ G A
Sbjct: 92 DNIAEVKRVINTQRVGAPAKAGVFA 116
>UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P0 - Entamoeba histolytica HM-1:IMSS
Length = 316
Score = 108 bits (259), Expect = 2e-22
Identities = 50/85 (58%), Positives = 64/85 (75%)
Frame = +2
Query: 2 DNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTR 181
DNVGS Q Q IR LRG+ +MGKNT++RKAIK+ + P LE+LLPHIKGNVGF+FT+
Sbjct: 40 DNVGSSQFQTIRKELRGTCEFVMGKNTLIRKAIKNQAETQPELEELLPHIKGNVGFIFTK 99
Query: 182 GDLVEVRDKLLENKVQAPARPGAIA 256
GDL +++ KL E K +PA+ G IA
Sbjct: 100 GDLYQLKAKLTELKAPSPAKAGVIA 124
Score = 103 bits (246), Expect = 7e-21
Identities = 47/101 (46%), Positives = 69/101 (68%)
Frame = +1
Query: 256 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 435
P V++PA +TGL P +T+F QAL+I +KI+KG IEI ++ ++K G+KVG S+A LL
Sbjct: 125 PNDVIVPAGDTGLDPTQTNFVQALNIASKITKGQIEITSETLLIKEGEKVGVSQAVLLQK 184
Query: 436 LNISPFSYGLVVKQVYDSGTIFAPEFWDIKPEDLRAKFQAG 558
L I+PF YG V+ VYD+G ++ + D+ D+ KFQ G
Sbjct: 185 LKINPFKYGAVIDVVYDNGIVYDAKALDLTESDIVKKFQEG 225
>UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P0 -
Trypanosoma cruzi
Length = 323
Score = 101 bits (241), Expect = 3e-20
Identities = 59/140 (42%), Positives = 84/140 (60%)
Frame = +1
Query: 256 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 435
P V++PA NTG+ P+ TSFFQAL+I TKI+KGT+EI++D +L GD+V S ATLL
Sbjct: 125 PCDVIVPAGNTGMEPKATSFFQALNIATKIAKGTVEIVSDKKVLSVGDRVDNSTATLLQK 184
Query: 436 LNISPFSYGLVVKQVYDSGTIFAPEFWDIKPEDLRAKFQAGSC*CSCSFLLGYWLPQLIA 615
L+ISPF Y + V+ V+D G +F E I +D+ K+ + LG +P A
Sbjct: 185 LDISPFYYQVEVQSVWDRGMLFLREDLSI-TDDVVEKYLLEGISNVAALSLGAGIP-TAA 242
Query: 616 SAPHFHLPMGFQEPFWASLA 675
+ PH + F+ AS+A
Sbjct: 243 TLPHMIMD-AFKTLLGASVA 261
Score = 59.3 bits (137), Expect = 1e-07
Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 9/101 (8%)
Frame = +2
Query: 2 DNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNN--PALEKLLPH-------IK 154
DNV SQQ+ +R LRG ++MGK T+ +K ++ ++ A +KLL + +
Sbjct: 31 DNVRSQQVHDVRRDLRGLGELVMGKKTLQKKIVERRAEDKKASAYDKLLYNTCIEKKLLC 90
Query: 155 GNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAHCQSSFP 277
GN +FT ++ + L +++VQAPAR GAIA C P
Sbjct: 91 GNTALIFTNEEIPVITAVLDKHRVQAPARVGAIAPCDVIVP 131
>UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14;
Apicomplexa|Rep: 60S acidic ribosomal protein P0 -
Plasmodium falciparum (isolate 7G8)
Length = 316
Score = 98.3 bits (234), Expect = 2e-19
Identities = 50/101 (49%), Positives = 64/101 (63%)
Frame = +1
Query: 256 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 435
P+ V IP TG+ P TSF ++L I TKI KG IEI VH++K G+KV AS ATLL
Sbjct: 119 PIDVFIPPGPTGMDPSHTSFLESLGISTKIVKGQIEIQEHVHLIKQGEKVTASSATLLRK 178
Query: 436 LNISPFSYGLVVKQVYDSGTIFAPEFWDIKPEDLRAKFQAG 558
N++P SYG+ V+ VYD G I+ + DI ED+ KF G
Sbjct: 179 FNMNP-SYGVDVRTVYDDGVIYDAKVLDITDEDILEKFSKG 218
Score = 96.7 bits (230), Expect = 6e-19
Identities = 49/94 (52%), Positives = 64/94 (68%), Gaps = 1/94 (1%)
Frame = +2
Query: 2 DNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTR 181
DNVGS QM +R SLRG + +LMGKNT +R A+K +L P +EKLLP +K N+GFVF +
Sbjct: 33 DNVGSNQMASVRKSLRGKATILMGKNTRIRTALKKNLQAVPQIEKLLPLVKLNMGFVFCK 92
Query: 182 GDLVEVRDKLLENKVQA-PARPGAIAHCQSSFPP 280
DL E+R+ +L+NK + PAR G IA PP
Sbjct: 93 DDLSEIRNIILDNKSSSHPARLGVIAPIDVFIPP 126
>UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1;
Eufolliculina uhligi|Rep: 60S acidic ribosomal protein
P0 - Eufolliculina uhligi
Length = 324
Score = 97.5 bits (232), Expect = 3e-19
Identities = 54/115 (46%), Positives = 73/115 (63%), Gaps = 1/115 (0%)
Frame = +1
Query: 286 TGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGL 465
TG+ P +TSFFQAL I TKI KG I+I+N++H++ KVG SEA LL L + PFS+GL
Sbjct: 138 TGMDPSQTSFFQALGIFTKIVKGQIDIVNELHLIFKDKKVGNSEAVLLKKLGVKPFSFGL 197
Query: 466 VVKQVYDSGTIFAPEFWDIKPEDLRAKFQAG-SC*CSCSFLLGYWLPQLIASAPH 627
VK VYD+G++++ E + + L KF G + S LG +P ASAPH
Sbjct: 198 KVKNVYDNGSVYSAEVLKLTNDILLGKFMNGVRNIAAMSLTLG--IP-TAASAPH 249
Score = 59.3 bits (137), Expect = 1e-07
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 17/102 (16%)
Frame = +2
Query: 2 DNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDN-----------------NPAL 130
+NVGS+Q+Q +R LR + +L GKNT++R +K L P L
Sbjct: 26 NNVGSKQLQDLRRVLRNKATILFGKNTLIRAGLKHRLTEPNAEDEDFEKRKNTWTPKPEL 85
Query: 131 EKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIA 256
E L+P ++GNV +F ++ EV + E+KV A A+ G IA
Sbjct: 86 EHLIPLLRGNVCLIFCHAEMGEVLSAVEESKVPAEAKAGTIA 127
>UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6;
Paramecium tetraurelia|Rep: 60S acidic ribosomal protein
P0 - Paramecium tetraurelia
Length = 323
Score = 96.7 bits (230), Expect = 6e-19
Identities = 54/124 (43%), Positives = 68/124 (54%)
Frame = +1
Query: 256 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 435
P+ VVIP TG+ P FF AL IPTKI KG I+I D +LK G KVG S+A LL
Sbjct: 136 PIDVVIPPGPTGMDPASIQFFHALQIPTKIEKGQIQITKDFVVLKTGQKVGQSQAVLLQK 195
Query: 436 LNISPFSYGLVVKQVYDSGTIFAPEFWDIKPEDLRAKFQAGSC*CSCSFLLGYWLPQLIA 615
L PF YG+ V YD+G+I + + D+ AKFQ S L W+ + A
Sbjct: 196 LGKKPFLYGMEVLACYDNGSILNKQQVSVNLNDIVAKFQQNVRNVSAISLQNGWVNE--A 253
Query: 616 SAPH 627
SAP+
Sbjct: 254 SAPY 257
Score = 55.2 bits (127), Expect = 2e-06
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 18/110 (16%)
Frame = +2
Query: 5 NVGSQQMQQIR-ISLRGSSIVLMGKNTMMRKAIKDHLDNNPA-----------------L 130
NVGS+Q+Q IR I + ++++++GKNT+ +K + + P L
Sbjct: 34 NVGSKQVQDIRRILAKRNALLVIGKNTLFKKVLATRVQELPKEHEYYEDLAKFGSAIKEL 93
Query: 131 EKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAHCQSSFPP 280
+ L + G VGF+FT + +++ + ENKV+ PAR GA+A PP
Sbjct: 94 DALKNSVAGKVGFIFTDTPVFDLKPIIEENKVETPARVGAVAPIDVVIPP 143
>UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1;
Encephalitozoon cuniculi|Rep: 60S ACIDIC RIBOSOMAL
PROTEIN P0 - Encephalitozoon cuniculi
Length = 290
Score = 96.7 bits (230), Expect = 6e-19
Identities = 44/84 (52%), Positives = 58/84 (69%)
Frame = +1
Query: 286 TGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGL 465
TG+ P+KTS+FQAL I TKI+KG +EII+ +L GDKVG S+A LL MLNI PF Y +
Sbjct: 150 TGMTPDKTSYFQALGIATKITKGKVEIISPYKVLSEGDKVGPSQANLLGMLNIKPFCYKM 209
Query: 466 VVKQVYDSGTIFAPEFWDIKPEDL 537
+ Q+Y+ G I+ DI ED+
Sbjct: 210 TMHQIYEDGVIYDSSLIDIGEEDI 233
Score = 53.2 bits (122), Expect = 7e-06
Identities = 30/85 (35%), Positives = 52/85 (61%)
Frame = +2
Query: 2 DNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTR 181
+NV S Q++ I+ G++ +LMGKN+ +R+AI D P L + +KG+V FVF +
Sbjct: 57 ENVVSTQLKDIKRQWGGNAELLMGKNSAIRRAIADL--GKPELSGVYDLVKGDVCFVFFK 114
Query: 182 GDLVEVRDKLLENKVQAPARPGAIA 256
G+ +++ + EN +A A+ G +A
Sbjct: 115 GNARDIKKAIDENVREACAKVGNVA 139
>UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4;
Euplotes|Rep: 60S acidic ribosomal protein P0 - Euplotes
minuta
Length = 333
Score = 95.9 bits (228), Expect = 1e-18
Identities = 47/91 (51%), Positives = 62/91 (68%)
Frame = +1
Query: 265 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 444
V I A TGL P++T+FFQ L+IPTKI+K IEI D I+ G+KVG++EA LL LNI
Sbjct: 139 VWIKAGGTGLDPKQTAFFQNLAIPTKIAKAQIEISADKQIITEGEKVGSNEAALLQKLNI 198
Query: 445 SPFSYGLVVKQVYDSGTIFAPEFWDIKPEDL 537
+PFSY L V V+D+G ++ P DI E +
Sbjct: 199 NPFSYKLSVAHVFDNGNVYGPGVLDITSESI 229
Score = 56.4 bits (130), Expect = 8e-07
Identities = 32/105 (30%), Positives = 59/105 (56%), Gaps = 18/105 (17%)
Frame = +2
Query: 2 DNVGSQQMQQIRISLRGS-SIVLMGKNTMMRKAIKDHLDNN-----------------PA 127
DN+ ++Q+ R LR + S++LMG+NT+++ A++ + P
Sbjct: 33 DNISARQIHACRKELRSNNSLMLMGENTLIKAALQKRISKPIESESDFEERSKTWTPIPH 92
Query: 128 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAHC 262
+E L+ +KGN+G +FT DL +++D + + +APAR G++A C
Sbjct: 93 MEPLVRLLKGNLGIIFTNHDLTDIKDIIDRHTREAPARVGSVAQC 137
>UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2;
Tetrahymena thermophila|Rep: 60S acidic ribosomal
protein P0 - Tetrahymena thermophila SB210
Length = 324
Score = 87.4 bits (207), Expect = 4e-16
Identities = 50/123 (40%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
Frame = +1
Query: 265 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 444
V+IP TG+ P + +FF ALSI TKI KG IEI +V + G K+G SE +LL +NI
Sbjct: 139 VMIPPGPTGMDPSQINFFHALSISTKIQKGQIEITKEVQVCTKGKKIGNSEVSLLEKMNI 198
Query: 445 SPFSYGLVVKQVYDSGTIFAPEFWDIKPEDLRAKFQAGSC-*CSCSFLLGYWLPQLIASA 621
PFSYG+ YD+G I E I P + F + + S GY S
Sbjct: 199 QPFSYGMKCFSDYDNGEILTEEVLSISPSVILDAFAQNTLRIAAVSLATGY---VTAPSV 255
Query: 622 PHF 630
PHF
Sbjct: 256 PHF 258
Score = 62.1 bits (144), Expect = 2e-08
Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 16/109 (14%)
Frame = +2
Query: 2 DNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIK---------DHLD-------NNPALE 133
+NVGS Q+QQIR SL ++I+++GKNT++RKA++ D P L
Sbjct: 35 ENVGSLQLQQIRRSLGSNNIMVIGKNTVVRKAVQLKSADLPTDSKYDWYRQFGAPKPQLA 94
Query: 134 KLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAHCQSSFPP 280
L+PH+K + +VF + ++ K+ V APAR G +A PP
Sbjct: 95 SLIPHLKNKIAYVFHNDPIFALKPKIESFVVPAPARVGTVAQKDVMIPP 143
>UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1;
Giardia lamblia ATCC 50803|Rep: 60S acidic ribosomal
protein P0 - Giardia lamblia ATCC 50803
Length = 326
Score = 85.0 bits (201), Expect = 2e-15
Identities = 52/127 (40%), Positives = 67/127 (52%)
Frame = +1
Query: 256 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 435
P VVI T GP++ F+ AL I TKI+KG IEI+N V+++K GD V S ATLL
Sbjct: 119 PADVVIEPMLTQSGPDQHGFYAALGIDTKINKGKIEIVNPVNLIKKGDIVTPSHATLLQR 178
Query: 436 LNISPFSYGLVVKQVYDSGTIFAPEFWDIKPEDLRAKFQAGSC*CSCSFLLGYWLPQLIA 615
L I PF Y + +YD G I+ +I + AK+ AG S LG P L A
Sbjct: 179 LEIDPFFYAMSALNLYDDGEIYDAAVLEIDDSVMEAKWNAG-LEAFVSLALGANFPCLPA 237
Query: 616 SAPHFHL 636
PH +
Sbjct: 238 -IPHIFM 243
Score = 66.5 bits (155), Expect = 7e-10
Identities = 38/85 (44%), Positives = 55/85 (64%)
Frame = +2
Query: 2 DNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTR 181
DNV S Q+ QIR LRG + +L GKNT++++ I + LD++ L+ LLP+IK NV FVFT
Sbjct: 36 DNVRSFQIAQIRRLLRGKAELLAGKNTIIKRVI-NQLDDDK-LKNLLPYIKLNVAFVFTN 93
Query: 182 GDLVEVRDKLLENKVQAPARPGAIA 256
GD + + K +A A+ G +A
Sbjct: 94 GDTSAILKAFKKTKRKAAAKAGIVA 118
>UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6;
Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P0 - Trichomonas vaginalis G3
Length = 318
Score = 85.0 bits (201), Expect = 2e-15
Identities = 48/125 (38%), Positives = 65/125 (52%), Gaps = 1/125 (0%)
Frame = +1
Query: 256 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 435
P V++ T + P AL+I KI KGTIEI + ++ G KVGASEA +LN+
Sbjct: 120 PCDVILQPQRTSMSPNDIKILHALNIQCKIFKGTIEITGEKQLIWEGQKVGASEANILNI 179
Query: 436 LNISPFSYGLVVKQVYDSGTIFAPEFWDIKPEDLRAKFQAG-SC*CSCSFLLGYWLPQLI 612
L I PF Y L ++ +YD G ++ P I E L KF+ G + +GY
Sbjct: 180 LGIMPFKYTLKIEALYDHGNMYDPSILAITEEVLGEKFRTGLRNVTGLALAVGY---PCA 236
Query: 613 ASAPH 627
ASAPH
Sbjct: 237 ASAPH 241
Score = 56.0 bits (129), Expect = 1e-06
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Frame = +2
Query: 5 NVGSQQMQQIRISLRGSSI-VLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTR 181
NV + Q+ IR L VL GKN++MR+A+ + P + +L H+ G +FT
Sbjct: 35 NVTANQLLNIRAGLAEHGCEVLFGKNSLMRRAVDQLKEELPGIRQLEEHLYHGAGLIFTN 94
Query: 182 GDLVEVRDKLLENKVQAPARPGAIAHCQSSFPP 280
G+ ++D + N + + A+ GAIA C P
Sbjct: 95 GNFKAIKDVIDANCLGSAAKVGAIAPCDVILQP 127
>UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Methanopyrus kandleri
Length = 357
Score = 72.9 bits (171), Expect = 8e-12
Identities = 37/86 (43%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Frame = +2
Query: 2 DNVGSQQMQQIRISLRG-SSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFT 178
+ + + Q+Q+IR LR +I+ M +NT+MR A+++ LD P LE LL +I+G V F+FT
Sbjct: 44 EGIPAPQLQEIRAKLRERDTIIRMSRNTLMRIALEEKLDERPELEPLLDYIEGPVAFIFT 103
Query: 179 RGDLVEVRDKLLENKVQAPARPGAIA 256
D ++ L E+K APA+PG IA
Sbjct: 104 NLDPFKLYKLLEESKASAPAKPGDIA 129
>UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protein;
n=2; Culicidae|Rep: Temporarily assignedprotein name
protein - Aedes aegypti (Yellowfever mosquito)
Length = 1309
Score = 72.5 bits (170), Expect = 1e-11
Identities = 55/111 (49%), Positives = 66/111 (59%), Gaps = 1/111 (0%)
Frame = +1
Query: 322 ALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIF 501
ALSIP KISKGTIEIINDV ILK GDK ++QVY G+IF
Sbjct: 738 ALSIPIKISKGTIEIINDVPILKSGDK----------------------IEQVY--GSIF 773
Query: 502 APEFWDIKPEDLRAKFQAG-SC*CSCSFLLGYWLPQLIASAPHFHLPMGFQ 651
+P+ DIKPEDLRAKFQ G + S +GY P L AS PH ++ +GF+
Sbjct: 774 SPDILDIKPEDLRAKFQVGVANLAGVSLEIGY--PTL-ASVPH-NIAIGFR 820
Score = 68.9 bits (161), Expect = 1e-10
Identities = 32/46 (69%), Positives = 39/46 (84%)
Frame = +2
Query: 89 RKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKV 226
++AI+ HL+ N L KLLPHIK VGFVFT+GDLVEVRDKL+E+KV
Sbjct: 692 QQAIRVHLEVNSDLRKLLPHIKSYVGFVFTKGDLVEVRDKLMESKV 737
>UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyces
cerevisiae YLR339CP; n=1; Kluyveromyces lactis|Rep:
Similarities with sp|O94085 Saccharomyces cerevisiae
YLR339CP - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 309
Score = 72.1 bits (169), Expect = 1e-11
Identities = 34/89 (38%), Positives = 56/89 (62%)
Frame = -3
Query: 522 DVPEFRCKNSSRIIYLLNNKTI*EWRDVQHVEKGGFRSSNLVTGLQDVYIVDDFNSTL*N 343
D+ + ++ + ++ L + +T+ EWR+VQ V++ FRS++ +T + D+ + D+FN T N
Sbjct: 121 DIQDGSWEDLTVVVNLNDGQTVGEWRNVQQVQQRSFRSTDSLTSVNDLNVRDNFNGTSGN 180
Query: 342 LGRDRKSLEERGLLWTEAGVVGGNDD*QW 256
LG + +SLEER L W GV G N D W
Sbjct: 181 LGWNTQSLEERSLTWFHTGVDGENPDIFW 209
Score = 40.7 bits (91), Expect = 0.042
Identities = 22/67 (32%), Positives = 31/67 (46%)
Frame = -2
Query: 256 GNGTRTSWSLDFVLQQFVTDLNEVSAGEHEANVALDVWQQFLEGWIVVQVVFDGFAHHCV 77
GN T + WS + V D+ + GE E NV LD QQ W V D + H V
Sbjct: 210 GNSTSSGWSGNLVGDDDFLDILQGIVGEDETNVTLDERQQLFVVWEVRDETSDSSSDHGV 269
Query: 76 FSHEHDT 56
+H+ ++
Sbjct: 270 LTHQDNS 276
>UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1;
Guillardia theta|Rep: 60S acidic ribosomal protein P0 -
Guillardia theta (Cryptomonas phi)
Length = 297
Score = 68.1 bits (159), Expect = 2e-10
Identities = 32/74 (43%), Positives = 46/74 (62%)
Frame = +1
Query: 286 TGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGL 465
T + P+ FQ+L+IPTKI KG IEII + +L+ G K+ +EATLL LNI PF +
Sbjct: 127 TNISPDGIGIFQSLNIPTKILKGQIEIITNFKVLEKGKKINEAEATLLQKLNILPFYNEI 186
Query: 466 VVKQVYDSGTIFAP 507
+ Y++G + P
Sbjct: 187 KIISFYENGKSYDP 200
Score = 64.1 bits (149), Expect = 4e-09
Identities = 28/85 (32%), Positives = 53/85 (62%)
Frame = +2
Query: 2 DNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTR 181
+N+ S+Q+++ + L +SI++ GKNT+++K ++D L N+ ++L I GNV F+FT
Sbjct: 32 ENLNSEQIKKCKRLLNNTSILITGKNTLIKKVLRDRLKNSTLSNEILTKINGNVSFIFTN 91
Query: 182 GDLVEVRDKLLENKVQAPARPGAIA 256
D +++ L N + A+ G +A
Sbjct: 92 EDPFFIQEILKNNSLPTAAKIGQVA 116
>UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiella
natans|Rep: Ribosomal protein L10 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 251
Score = 67.7 bits (158), Expect = 3e-10
Identities = 30/76 (39%), Positives = 47/76 (61%)
Frame = +1
Query: 262 SVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLN 441
+++I L P +T FFQAL IPT+ISK +IEII D+ ++ + S+ LL L+
Sbjct: 115 NIIIKKGIKNLSPSQTPFFQALGIPTRISKSSIEIIEDILLVSKNQALNKSQEVLLKKLD 174
Query: 442 ISPFSYGLVVKQVYDS 489
I P YG+ +K+++ S
Sbjct: 175 IKPHKYGVKIKKIFSS 190
Score = 37.5 bits (83), Expect = 0.39
Identities = 19/85 (22%), Positives = 44/85 (51%)
Frame = +2
Query: 2 DNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTR 181
+N+ S+Q+ IR LRG+S +++GK + + ++++ + ++ N+G +FT
Sbjct: 28 NNIRSKQIHDIRKHLRGTSEIVVGKKSFLSYLLQNNKLEMSRWMSVKEYLSDNIGLIFTN 87
Query: 182 GDLVEVRDKLLENKVQAPARPGAIA 256
+L + + + + + G IA
Sbjct: 88 SNLKILNETFKQYFLTSFVNAGEIA 112
>UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L10 - Thermofilum
pendens (strain Hrk 5)
Length = 294
Score = 65.7 bits (153), Expect = 1e-09
Identities = 42/125 (33%), Positives = 65/125 (52%), Gaps = 6/125 (4%)
Frame = +1
Query: 265 VVIPAHNTGLGP-EKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLN 441
+V+PA NTG+ P S F L IPT++ +G+I I D + KPGD + A LL+ L
Sbjct: 126 IVLPAGNTGIPPGPMISNFNKLGIPTRVQEGSIWIAKDTVVAKPGDVISPELAELLSKLG 185
Query: 442 ISPFSYGLVVKQVYDSGTIFAPEFWDI-----KPEDLRAKFQAGSC*CSCSFLLGYWLPQ 606
+ P L +K +Y G + +P+ ++ K + A +A + + + L LPQ
Sbjct: 186 LKPIESKLQIKTIYLDGKVVSPKDVELDVSLWKNRLVSAHTEAYNLAFNAALPLPQVLPQ 245
Query: 607 LIASA 621
LIA A
Sbjct: 246 LIAKA 250
>UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L10 - Cenarchaeum
symbiosum
Length = 274
Score = 65.3 bits (152), Expect = 2e-09
Identities = 43/119 (36%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
Frame = +1
Query: 259 LSVVIPAHNTGL--GPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLN 432
+ V +PA NTG+ GP T F +A IPTKI +GTI I+ D +K G+ +G A LL
Sbjct: 105 IDVTVPAKNTGIAPGPMLTEFKEA-GIPTKIDQGTIWILKDTTPVKKGEPIGDKLAPLLG 163
Query: 433 MLNISPFSYGLVVKQVYDSGTIFAPEFWDIKPEDLRAKF-QAGSC*CSCSFLLGYWLPQ 606
L+I P + ++ + G I++ E + E +RA F QA S S Y P+
Sbjct: 164 KLDIKPVEAVIALESALEEGVIYSREDLAVDVEAIRAGFAQAHQEALSLSVEAAYVTPE 222
Score = 35.1 bits (77), Expect = 2.1
Identities = 24/92 (26%), Positives = 43/92 (46%)
Frame = +2
Query: 2 DNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTR 181
+++ + Q+ +R LR S K+ + RKA+ + P ++K++ + G F+FT
Sbjct: 21 ESIRASQILPLRKKLRDSVSFFSIKDKVARKALAK--TDVPGMDKMMDQLTGQCMFMFTD 78
Query: 182 GDLVEVRDKLLENKVQAPARPGAIAHCQSSFP 277
+ L +NK AR G IA + P
Sbjct: 79 ISPFTLNVLLKKNKTMMAARAGDIASIDVTVP 110
>UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=8;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Pyrococcus horikoshii
Length = 342
Score = 65.3 bits (152), Expect = 2e-09
Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = +1
Query: 256 PLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLN 432
P VV+PA T L P QAL IP +I KG + I D +LK G+ + A +LN
Sbjct: 119 PKDVVVPAGPTPLAPGPIVGQMQALGIPARIEKGKVTIQKDTTVLKAGEVITPELANILN 178
Query: 433 MLNISPFSYGLVVKQVYDSGTIFAPEFWDIKPED 534
L I P GL V VY+ G ++ P+ I ++
Sbjct: 179 ALGIQPLEVGLDVLAVYEDGIVYTPDVLAIDEQE 212
Score = 40.3 bits (90), Expect = 0.055
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +2
Query: 26 QQIRISLRGSSIVLMGKNTMMRKAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVEV 199
Q R+ ++ + +NT++ AIK P LEKL+ +I G + T + ++
Sbjct: 40 QMRRLIRENGGLLRVSRNTLIELAIKKAAKELGKPELEKLVEYIDRGAGILVTNMNPFKL 99
Query: 200 RDKLLENKVQAPARPGAI 253
L +N+ APA+PGA+
Sbjct: 100 YKFLQQNRQPAPAKPGAV 117
>UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L10
- Candidatus Nitrosopumilus maritimus SCM1
Length = 288
Score = 59.3 bits (137), Expect = 1e-07
Identities = 43/121 (35%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Frame = +1
Query: 259 LSVVIPAHNTGL--GPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLN 432
+ VV+PA NTG+ GP T F +A IPTKI +GTI I D + G+ + A +L
Sbjct: 119 VDVVVPAKNTGIAPGPMLTEFKEA-GIPTKIDQGTIWIAKDSTPVLKGEAINEKLAAILG 177
Query: 433 MLNISPFSYGLVVKQVYDSGTIFAPEFWDIKPEDLRAKF-QAGSC*CSCSFLLGYWLPQL 609
L+I P G+ + + G +A E I E +R +F QA S S Y P+
Sbjct: 178 KLDIKPVEAGITLFTALEDGLKYAEEEMIIDVEKVRDEFAQAHQEAISLSIEAAYVTPEN 237
Query: 610 I 612
I
Sbjct: 238 I 238
Score = 33.1 bits (72), Expect = 8.4
Identities = 22/85 (25%), Positives = 43/85 (50%)
Frame = +2
Query: 2 DNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTR 181
+ V S Q+ +R +L+ K+ + +KA+++ + P ++ ++ KG V +FT
Sbjct: 35 NKVRSTQILPLRKTLKDDVEFFSVKDKVAQKALEN--SDIPGMKDMIGEFKGQVMIMFTN 92
Query: 182 GDLVEVRDKLLENKVQAPARPGAIA 256
++ L +NK+ AR G IA
Sbjct: 93 MSPFKLNVLLAKNKIMMMARGGDIA 117
>UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L10 -
Caldivirga maquilingensis IC-167
Length = 303
Score = 58.8 bits (136), Expect = 1e-07
Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +1
Query: 265 VVIPAHNTGLGPEKT-SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLN 441
+++PA NTG+ P S F L IPT+I G I + D + KPGD V A LL ++N
Sbjct: 132 IIVPAGNTGINPGPVLSRFSKLKIPTQIRDGKIWVARDTQVAKPGDTVTPELADLLRLIN 191
Query: 442 ISPFSYGLVVKQV 480
+ P L VK V
Sbjct: 192 VKPVYESLKVKAV 204
Score = 34.3 bits (75), Expect = 3.6
Identities = 18/80 (22%), Positives = 42/80 (52%)
Frame = +2
Query: 14 SQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLV 193
+ + Q R LRG +V + +N + A++ + + ++ ++ G GF+FT +
Sbjct: 49 ASMLHQYRRVLRGHGVVKVFRNKLFLIALR-RIYGDSVNAEIEKYLSGENGFIFTNENPF 107
Query: 194 EVRDKLLENKVQAPARPGAI 253
++ +++N V+ A+PG +
Sbjct: 108 DLYRIIVDNSVRRYAKPGDV 127
>UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339C;
n=5; Saccharomycetales|Rep: Putative uncharacterized
protein YLR339C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 183
Score = 58.8 bits (136), Expect = 1e-07
Identities = 35/85 (41%), Positives = 42/85 (49%)
Frame = -3
Query: 255 AMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPTLPLMCGNSFSRAGLLSRWSLMALRIIVF 76
A AP AGA TL S V TKPTLPL GN+FS++G + LMAL +VF
Sbjct: 36 ATAPALAGAATLLETITFLISVNGSLVKTKPTLPLTKGNNFSKSGKSDKKPLMALLTMVF 95
Query: 75 FPMSTILEPRSEXXXXXXXCEPTLS 1
P+ T P + E TLS
Sbjct: 96 LPIKTTALPLNSFLTSCICWEETLS 120
Score = 36.7 bits (81), Expect = 0.68
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = -1
Query: 359 IVPFEILVGIERAWKKEVFSGPRPVLWA 276
+VP ILVG +AWKKEV G PVL A
Sbjct: 1 MVPLAILVGTPKAWKKEVLPGSIPVLTA 28
>UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1;
Staphylothermus marinus F1|Rep: Ribosomal protein L10 -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 338
Score = 57.2 bits (132), Expect = 4e-07
Identities = 32/79 (40%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +1
Query: 265 VVIPAHNTGLGPEKT-SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLN 441
+VIP NTGL P S F L IPT+I +I I D + KPGD + A+LL L+
Sbjct: 124 IVIPEGNTGLSPGPILSTFSKLKIPTRIQGNSIVITRDTVVAKPGDTISEELASLLQRLD 183
Query: 442 ISPFSYGLVVKQVYDSGTI 498
I+ + +K YD G I
Sbjct: 184 IALKEVKINIKAAYDHGII 202
>UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 208
Score = 56.4 bits (130), Expect = 8e-07
Identities = 26/54 (48%), Positives = 35/54 (64%)
Frame = +2
Query: 119 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAHCQSSFPP 280
NP L+P + GNVG +FT+GDL EV +++ + KV APAR G +AH PP
Sbjct: 15 NPVFLNLVPLLVGNVGPIFTKGDLKEVDEEVAKYKVGAPARTGLVAHIDVIVPP 68
>UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Sulfolobaceae|Rep: Acidic ribosomal protein P0 homolog -
Sulfolobus solfataricus
Length = 338
Score = 55.2 bits (127), Expect = 2e-06
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Frame = +1
Query: 265 VVIPAHNTGL--GPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 438
VVIPA +TG+ GP S F L + TK+ G + ++ D + KPGD + A +L L
Sbjct: 125 VVIPAGDTGMPAGPI-LSVFGKLKVQTKVQDGKVHVVKDTVVAKPGDVIPAEALPILQKL 183
Query: 439 NISPFSYGLVVKQVYDSGTIFAPEFWDIKPEDLRA 543
I P L +K Y G + E + E R+
Sbjct: 184 GIMPVYVKLKIKVAYHEGLVIPAESLKLDLEGYRS 218
Score = 33.9 bits (74), Expect = 4.8
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +2
Query: 14 SQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLV 193
+ ++ +IR LRG + + + KNT+ + A K + +EKL ++ G F+FT+ D
Sbjct: 44 ADKLHEIRKKLRGKATIKVTKNTLFKIAAK---NAGIDIEKLEQYLTGPNVFIFTK-DNP 99
Query: 194 EVRDKLLEN-KVQAPARPG 247
+ + EN K++ A PG
Sbjct: 100 FITNMFFENYKLRRYAMPG 118
>UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 742
Score = 54.8 bits (126), Expect = 2e-06
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Frame = +2
Query: 11 GSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDN--NPALEKLLPHIKGNVGFVFTRG 184
G + + R S +V + K + + + H + NP L+P + GNVG + T+G
Sbjct: 574 GGHSFYFLGLVFRVSFLVWLPKRLFSQHSSRLHAEKTGNPVFLNLVPLLVGNVGLISTKG 633
Query: 185 DLVEVRDKLLENKVQAPARPGAIAHCQSSFPP 280
DL EV ++ + KV APAR G ++H PP
Sbjct: 634 DLKEVDKEVAKYKVGAPARAGLVSHIDVIVPP 665
>UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_55, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 223
Score = 54.4 bits (125), Expect = 3e-06
Identities = 29/75 (38%), Positives = 43/75 (57%)
Frame = +2
Query: 56 SIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAP 235
S+ M K+++ +A K NP L+P + GNVG +FT+GDL E +++ + KV AP
Sbjct: 38 SVFAMVKHSIRLRAEKT---GNPVFLNLVPLLVGNVGPIFTKGDLKEADEEVAKYKVGAP 94
Query: 236 ARPGAIAHCQSSFPP 280
A G +AH PP
Sbjct: 95 AHTGLVAHIDVIVPP 109
>UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L10P - Ignicoccus hospitalis KIN4/I
Length = 346
Score = 54.0 bits (124), Expect = 4e-06
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +1
Query: 265 VVIPAHNTGLGPEKT-SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLN 441
+V+PA +TGL P S F L I T + GTI I D + KPGD + A+LL L
Sbjct: 130 IVVPAGDTGLTPGPILSTFGKLKIKTMVKGGTIHIAKDTVVAKPGDVISPELASLLQKLG 189
Query: 442 ISPFSYGLVVKQVY 483
I+P + +K Y
Sbjct: 190 ITPMELKMKIKGAY 203
>UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 50S ribosomal
protein L10P - Methanosphaera stadtmanae (strain DSM
3091)
Length = 332
Score = 52.4 bits (120), Expect = 1e-05
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +1
Query: 256 PLSVVIPAHNTGLGPEKT-SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLN 432
P +V+PA +T P Q + IP KI KG+I + +D I+ G+++ + A +L
Sbjct: 114 PADIVVPAGDTSFPPGPILGELQQVGIPAKIDKGSIVVTDDAKIVDEGEEIPKAVADILT 173
Query: 433 MLNISPFSYGLVVKQVYDSGTIFAPEFWDIKPED 534
L I P G+ + V + TI+ + I E+
Sbjct: 174 KLEIHPMEVGIDLLAVCEGDTIYTADVLAIDEEE 207
Score = 41.1 bits (92), Expect = 0.032
Identities = 22/84 (26%), Positives = 51/84 (60%)
Frame = +2
Query: 5 NVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRG 184
++ ++Q+Q +R SL ++I+ M + ++ A+++ + +E L +++G VFT+
Sbjct: 32 DIPAKQLQTMRKSLGDNAILKMSRKNFIKIALEN--SDKEEVEGLADYLEGQPAMVFTKM 89
Query: 185 DLVEVRDKLLENKVQAPARPGAIA 256
+ ++ L ++K +APA+ G+IA
Sbjct: 90 NPFKLFKILEDSKTEAPAKAGSIA 113
>UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=1;
Archaeoglobus fulgidus|Rep: Acidic ribosomal protein P0
homolog - Archaeoglobus fulgidus
Length = 339
Score = 50.0 bits (114), Expect = 7e-05
Identities = 32/100 (32%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = +1
Query: 256 PLSVVIPAHNTGLGPEKT-SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLN 432
P+ VV+ T + P + Q +P I KG + + ++K G+ V A L
Sbjct: 117 PVDVVVNEGPTPIPPGPLMAELQMAGLPVAIEKGKVVVKATTTVVKAGEVVRPEVARALE 176
Query: 433 MLNISPFSYGLVVKQVYDSGTIFAPEFWDIKPEDLRAKFQ 552
L+I P GL VK + DSG I PE I E + FQ
Sbjct: 177 RLDIKPIKIGLDVKAMLDSGVILTPETLAIDTEKVLEDFQ 216
Score = 33.1 bits (72), Expect = 8.4
Identities = 21/84 (25%), Positives = 43/84 (51%)
Frame = +2
Query: 5 NVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRG 184
NV + QMQ+IR RG + + + KNT++ +A+ D L + KL ++ + +
Sbjct: 36 NVPAGQMQKIRREFRGKAEIKVVKNTLLERAL-DALGGD--YLKLKDYLGDQIAIITADE 92
Query: 185 DLVEVRDKLLENKVQAPARPGAIA 256
+ + + + KV +P +P ++
Sbjct: 93 NPFRLFRMIEDTKVPSPLKPNQVS 116
>UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Methanococcus|Rep: Acidic ribosomal protein P0 homolog -
Methanococcus vannielii
Length = 336
Score = 47.6 bits (108), Expect = 4e-04
Identities = 26/87 (29%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Frame = +2
Query: 8 VGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLD--NNPALEKLLPHIKGNVGFVFTR 181
V + Q+Q+IR +R + M +NT++++A+++ + NP KL+ ++ V T
Sbjct: 39 VPAVQLQEIRDKIRDQMTLKMSRNTLIKRAVEEVAEETGNPEFAKLVDYLDKGAAIVVTE 98
Query: 182 GDLVEVRDKLLENKVQAPARPGAIAHC 262
+ ++ L E+K AP + GAIA C
Sbjct: 99 MNPFKLFKTLEESKSPAPIKGGAIAPC 125
>UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Archaea|Rep: Acidic ribosomal protein P0 homolog -
Methanosarcina mazei (Methanosarcina frisia)
Length = 347
Score = 47.2 bits (107), Expect = 5e-04
Identities = 23/64 (35%), Positives = 33/64 (51%)
Frame = +1
Query: 319 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 498
Q+ IP I G + + + K G+ V AT+L+ L I P GL ++ YD GTI
Sbjct: 142 QSAGIPASIDAGKVAVKETKVVCKAGEAVPQKLATMLSKLEIYPLIVGLDLRAAYDDGTI 201
Query: 499 FAPE 510
+ PE
Sbjct: 202 YEPE 205
Score = 33.1 bits (72), Expect = 8.4
Identities = 18/85 (21%), Positives = 44/85 (51%)
Frame = +2
Query: 2 DNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTR 181
+ + + ++Q+IR L+ +++ + +NT+ +A+ ++ P + + L + +FT
Sbjct: 38 EGILATKIQKIRRDLKDVAVLKVSRNTLTERALNQLGESIPEMTRYLDN---QTALIFTN 94
Query: 182 GDLVEVRDKLLENKVQAPARPGAIA 256
++ L + K +P + GAIA
Sbjct: 95 ESPFKLYKLLEQTKTPSPIKAGAIA 119
>UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4;
Methanomicrobiales|Rep: Ribosomal protein L10 -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 346
Score = 45.6 bits (103), Expect = 0.001
Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
Frame = +1
Query: 256 PLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLN 432
P +VIP T P Q + IP I G ++I ++K G+ + A L
Sbjct: 117 PEDIVIPKGPTSFKPGPIVGELQQVGIPAAIEGGKVKIRETKTVVKKGEVINKKVAEALV 176
Query: 433 MLNISPFSYGLVVKQVYDSGTIFAPEFWDIKPE 531
L + P GL+++ Y TIF P+ I E
Sbjct: 177 KLGVKPMDVGLILQAAYYRETIFTPDLLAIDEE 209
Score = 41.9 bits (94), Expect = 0.018
Identities = 26/83 (31%), Positives = 46/83 (55%)
Frame = +2
Query: 8 VGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGD 187
+ + Q+QQIR +LRG++ V M +NT++ A+ + L + A L H +G +FT +
Sbjct: 37 IPASQVQQIRRNLRGTARVKMARNTLIEHALNE-LGGSVA--TLNDHAEGQSALIFTNEN 93
Query: 188 LVEVRDKLLENKVQAPARPGAIA 256
++ L + K + A+PG A
Sbjct: 94 PFKLFKLLEKTKTKMAAKPGETA 116
>UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:
NEQ091 - Nanoarchaeum equitans
Length = 284
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +1
Query: 256 PLSVVIPAHNTGL--GPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL 429
P +VIP T + GP +T +AL + TK++ G IEI+ D ++K G+ V A +L
Sbjct: 113 PKDIVIPKGITNIPVGPIQTEL-RALGVKTKVTSGKIEIVEDAVVVKEGEIVSPKVANVL 171
Query: 430 NMLNISP 450
L I P
Sbjct: 172 QTLGIKP 178
>UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Halobacteriaceae|Rep: Acidic ribosomal protein P0
homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 352
Score = 45.2 bits (102), Expect = 0.002
Identities = 24/83 (28%), Positives = 46/83 (55%)
Frame = +2
Query: 8 VGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGD 187
+ S+Q+Q +R L G + + M +NT++ +A+++ D L+ L +++G VG V T +
Sbjct: 41 IPSKQLQDMRRGLHGQAALRMSRNTLLVRALEEAGD---GLDTLTEYVEGEVGLVATNDN 97
Query: 188 LVEVRDKLLENKVQAPARPGAIA 256
+ +L +K AP G +A
Sbjct: 98 PFGLYQQLENSKTPAPINAGEVA 120
>UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole genome
shotgun sequence; n=3; Vitis vinifera|Rep: Chromosome
chr6 scaffold_28, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 105
Score = 44.4 bits (100), Expect = 0.003
Identities = 31/74 (41%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = -3
Query: 258 WAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPTLPLMCGNSFSRAG--LLSRWSLMALRI 85
WA P RAGA TL+ + S TS +SP V PTLP G + G + S SLM
Sbjct: 28 WATNPVRAGAPTLYLATSSSTSFKSPFVKIGPTLPTRRGTRLRKTGFPVFSARSLMD-NN 86
Query: 84 IVFFPMSTILEPRS 43
I F +S I +PR+
Sbjct: 87 ISFRKISIIFKPRT 100
>UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1;
uncultured archaeon|Rep: Acidic ribosomal protein P0 -
uncultured archaeon
Length = 313
Score = 41.9 bits (94), Expect = 0.018
Identities = 22/83 (26%), Positives = 44/83 (53%)
Frame = +2
Query: 8 VGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGD 187
+GS+Q+Q+IR RG +++ + KN+M+ ++ + ++ I + +FT D
Sbjct: 37 LGSKQLQRIRKEFRGDALLKVSKNSMIARSF-----GGSGMNDMVDFIDDQMALIFTDLD 91
Query: 188 LVEVRDKLLENKVQAPARPGAIA 256
+ L + K+ AP + GA+A
Sbjct: 92 AFALYKVLEKGKIPAPIKAGAVA 114
>UniRef50_Q9Y9W8 Cluster: Acidic ribosomal protein P0 homolog; n=1;
Aeropyrum pernix|Rep: Acidic ribosomal protein P0
homolog - Aeropyrum pernix
Length = 341
Score = 40.7 bits (91), Expect = 0.042
Identities = 27/81 (33%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +1
Query: 271 IPAHNTGLGPEKT-SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNIS 447
IP T L P S F L I ++ G I I + + KPGD + A LL L I
Sbjct: 130 IPEGMTNLTPGPILSVFGKLRIQYQVRGGKIYIAKETVVAKPGDVISEDLAGLLMALGIR 189
Query: 448 PFSYGLVVKQVYDSGTIFAPE 510
P G+ VK D G + +
Sbjct: 190 PIEKGVRVKFAIDGGVLITED 210
>UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_254_32992_33747 - Giardia lamblia
ATCC 50803
Length = 251
Score = 39.9 bits (89), Expect = 0.073
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = +2
Query: 5 NVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALE--KLLPHIKGNVGFVFT 178
N+ S QQ+R S++G + + MGKN +MR A+ + + + +L +KG G +FT
Sbjct: 57 NMTSSSWQQLRTSMKGYARIFMGKNQLMRYALGKTEEESYRTKTWQLGRLLKGMTGLLFT 116
Query: 179 RGDLVEVRDKLLENKVQAPARPGAIA 256
+VR L AR G +A
Sbjct: 117 SAPEEKVRSALASVARPCLARGGDVA 142
>UniRef50_Q9UKD2 Cluster: mRNA turnover protein 4 homolog; n=30;
Metazoa|Rep: mRNA turnover protein 4 homolog - Homo
sapiens (Human)
Length = 239
Score = 37.9 bits (84), Expect = 0.29
Identities = 16/69 (23%), Positives = 35/69 (50%)
Frame = +1
Query: 325 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 504
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 505 PEFWDIKPE 531
+ D PE
Sbjct: 216 QQMGDDLPE 224
>UniRef50_Q9VQB9 Cluster: CG3557-PA; n=1; Drosophila
melanogaster|Rep: CG3557-PA - Drosophila melanogaster
(Fruit fly)
Length = 271
Score = 37.5 bits (83), Expect = 0.39
Identities = 28/74 (37%), Positives = 39/74 (52%)
Frame = +3
Query: 12 ARNRCSRSVSRYVAPVSCSWEKTQ*CAKPSKTTWTTIQPSRNCCHTSRATLASCSPAETS 191
A + CS S S P S +W C+KPS T +P+R CC + +A L CSP +T
Sbjct: 81 APSPCS-SGSSSAYPSSSAWSTC--CSKPS-TICCYPKPTR-CCASPKAPLVPCSPMDTP 135
Query: 192 LRSVTNCWRTKSKL 233
S C++T S+L
Sbjct: 136 KSS---CFKTASRL 146
>UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Pyrobaculum|Rep: Acidic ribosomal protein P0 homolog -
Pyrobaculum aerophilum
Length = 345
Score = 36.7 bits (81), Expect = 0.68
Identities = 23/80 (28%), Positives = 40/80 (50%)
Frame = +2
Query: 8 VGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGD 187
+ S+ + + R LR ++ + K T+ + A PA ++ ++G VGF FT +
Sbjct: 45 LSSRILHEYRYRLRRYGVIKIIKPTLFKIAFTKVYGGIPA--EIAEKVRGEVGFFFTSFN 102
Query: 188 LVEVRDKLLENKVQAPARPG 247
EV + EN V+ A+PG
Sbjct: 103 PAEVIKIVAENSVRRAAQPG 122
>UniRef50_Q4Q0U9 Cluster: 60S acidic ribosomal protein, putative;
n=5; Trypanosomatidae|Rep: 60S acidic ribosomal protein,
putative - Leishmania major
Length = 227
Score = 36.3 bits (80), Expect = 0.90
Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Frame = +2
Query: 5 NVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI--KDHLDNNPALEKLLPHIKGNVGFVFT 178
N+ + +QQIR G S + +G N +M AI + L KL P + G G +FT
Sbjct: 47 NIRTNILQQIREERAGDSRIFLGNNKVMMIAIGRDEESAQRQNLHKLSPFLTGLCGLLFT 106
Query: 179 RGDLVEVRDKLLENKVQAPARPGAIA 256
EV++ AR G A
Sbjct: 107 NLSKKEVKEYFATVGAPVYARTGQTA 132
>UniRef50_A7T9I2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 115
Score = 35.1 bits (77), Expect = 2.1
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +2
Query: 74 KNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDL 190
K T++RK +K HLDN P L K LP + G + + + GDL
Sbjct: 69 KVTIVRKELKSHLDNLPDLSK-LPDVDGGLAPLPSAGDL 106
>UniRef50_A7S712 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 367
Score = 35.1 bits (77), Expect = 2.1
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +2
Query: 74 KNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDL 190
K T++RK +K HLDN P L K LP + G + + + GDL
Sbjct: 321 KVTIVRKELKSHLDNLPDLSK-LPDVDGGLAPLPSAGDL 358
>UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC01801 protein - Schistosoma
japonicum (Blood fluke)
Length = 236
Score = 34.7 bits (76), Expect = 2.7
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = +2
Query: 5 NVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI-KDHLDN-NPALEKLLPHIKGNVGFVFT 178
N +Q++ +IR ++ + L G N + A+ K H D+ P L L ++KG +FT
Sbjct: 41 NPRTQKVSEIRKNMPDIKL-LFGINKVTVWALGKTHKDSYRPKLHHLCKYLKGQCALLFT 99
Query: 179 RGDLVEVRDKLLENKVQAPARPGAIA 256
+ E+R++L + RPGA A
Sbjct: 100 KSSPSELREQLDAFRSAEYCRPGAPA 125
>UniRef50_Q84CM8 Cluster: Putative fimbrial adhesin protein; n=3;
Enterobacteriaceae|Rep: Putative fimbrial adhesin
protein - Escherichia coli
Length = 174
Score = 34.3 bits (75), Expect = 3.6
Identities = 25/73 (34%), Positives = 33/73 (45%)
Frame = +1
Query: 247 CHCPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATL 426
C PLS A T LGP+ T L KIS+G E++ D + G V +
Sbjct: 9 CLLPLSFSSFAATTDLGPKGT-----LKFTLKISQGACELVKDSVEVDMGTAVLKKPVRI 63
Query: 427 LNMLNISPFSYGL 465
+N +PFS GL
Sbjct: 64 GTEINPTPFSIGL 76
>UniRef50_P12021 Cluster: Apomucin; n=9; Amniota|Rep: Apomucin - Sus
scrofa (Pig)
Length = 1150
Score = 33.9 bits (74), Expect = 4.8
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Frame = -1
Query: 314 KEVFSGPR---PVLWAGMTTDNGQWHQDELELGLCSPTVCHGP--QRGLRG*TRSQRCP* 150
KE+ + P+ P AG T D ++ L P VCHGP + G + C
Sbjct: 892 KEITASPKVSSPETTAGATEDQENENKTGCPAPLPPPPVCHGPLGEEKSPGDVWTANCHK 951
Query: 149 CVATVSRGLDCCP 111
C T ++ +DC P
Sbjct: 952 CTCTEAKTVDCKP 964
>UniRef50_UPI00015B4FCF Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 170
Score = 33.5 bits (73), Expect = 6.3
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +3
Query: 90 AKPSKTTWTTIQPSRNCCHTSRATLASCSP---AETSLRSVTNCWRTKS 227
A T WTT + T+ AT A+ + A ++ ++TN WRTKS
Sbjct: 102 ASTISTRWTTTAATTTTTATTAATTAAAATSTSASNAISTITNAWRTKS 150
>UniRef50_UPI00006D0E10 Cluster: hypothetical protein
TTHERM_00070730; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00070730 - Tetrahymena
thermophila SB210
Length = 5422
Score = 33.5 bits (73), Expect = 6.3
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2
Query: 107 HLDNNPALEKLLPHIKGNVGFVFTRGDLVEVR 202
+L NN L+KLLP I+G ++ RGDL E++
Sbjct: 831 NLANNEVLQKLLPIIEGKSLVLYERGDLKEIK 862
>UniRef50_UPI000023E460 Cluster: hypothetical protein FG04875.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG04875.1 - Gibberella zeae PH-1
Length = 506
Score = 33.1 bits (72), Expect = 8.4
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = -1
Query: 548 NLARRSSGLMSQNSGAKIVPESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 369
+L RS + G ++ +Y LT YE GE +N SEA LSP +++ +
Sbjct: 164 DLVLRSPHDILDGIGTLMLLNNYITLTAEAYEKGETYNPPPLDGSEASNLSPSYRIAARI 223
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 914,410,884
Number of Sequences: 1657284
Number of extensions: 20424028
Number of successful extensions: 57014
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 54245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56975
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 68731504465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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