Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30897
(800 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ri... 151 2e-36
BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, larg... 151 2e-36
BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, larg... 151 2e-36
BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, larg... 151 2e-36
BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, larg... 151 2e-36
BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, larg... 151 2e-36
BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, larg... 151 2e-36
BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, larg... 151 2e-36
BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, larg... 151 2e-36
BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, larg... 151 2e-36
BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, larg... 151 2e-36
BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, larg... 151 2e-36
BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, larg... 151 2e-36
AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 va... 151 2e-36
AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. 151 2e-36
BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. 148 2e-35
AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 va... 148 2e-35
AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. 147 4e-35
BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. 140 7e-33
BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein. 85 3e-16
BC006504-1|AAH06504.1| 239|Homo sapiens mRNA turnover 4 homolog... 38 0.042
BC003013-1|AAH03013.1| 239|Homo sapiens mRNA turnover 4 homolog... 38 0.042
AY303790-1|AAP68821.1| 239|Homo sapiens acidic ribosomal protei... 38 0.042
AL035413-12|CAI22233.1| 239|Homo sapiens mRNA turnover 4 homolo... 38 0.042
AK027569-1|BAB55205.1| 239|Homo sapiens protein ( Homo sapiens ... 38 0.042
AF173378-1|AAD52608.1| 239|Homo sapiens 60S acidic ribosomal pr... 38 0.042
AF152479-1|AAD43740.1| 807|Homo sapiens protocadherin alpha 1 s... 33 0.91
AF152305-1|AAD43699.1| 950|Homo sapiens protocadherin alpha 1 p... 33 0.91
AC005609-13|AAC34325.1| 807|Homo sapiens KIAA0345-like 13 protein. 33 0.91
BC012801-1|AAH12801.1| 666|Homo sapiens gamma tubulin ring comp... 33 1.2
BC009870-1|AAH09870.1| 666|Homo sapiens gamma tubulin ring comp... 33 1.2
AK127306-1|BAC86926.1| 254|Homo sapiens protein ( Homo sapiens ... 33 1.2
BC104804-1|AAI04805.1| 950|Homo sapiens protocadherin alpha 9 p... 32 2.8
BC104802-1|AAI04803.1| 950|Homo sapiens protocadherin alpha 9 p... 32 2.8
BC033735-1|AAH33735.1| 890|Homo sapiens PCDHA5 protein protein. 32 2.8
AJ007610-1|CAC22257.1| 950|Homo sapiens protocadherin alpha 9 p... 32 2.8
AF152487-1|AAD43748.1| 842|Homo sapiens protocadherin alpha 9 s... 32 2.8
AF152483-1|AAD43744.1| 816|Homo sapiens protocadherin alpha 5 s... 32 2.8
AF152317-1|AAD43711.1| 950|Homo sapiens protocadherin alpha 9 p... 32 2.8
AF152313-1|AAD43707.1| 936|Homo sapiens protocadherin alpha 5 p... 32 2.8
AC005609-9|AAC34321.1| 816|Homo sapiens KIAA0345-like 9 protein. 32 2.8
AC005609-5|AAC34313.1| 842|Homo sapiens KIAA0345-like 5 protein. 32 2.8
AB002343-1|BAA20803.2| 845|Homo sapiens KIAA0345 protein. 32 2.8
BC129807-1|AAI29808.1| 824|Homo sapiens protocadherin alpha 3 p... 31 4.8
BC069064-1|AAH69064.1| 824|Homo sapiens PCDHA3 protein protein. 31 4.8
BC036674-1|AAH36674.1| 950|Homo sapiens PCDHA6 protein protein. 31 4.8
AF152485-1|AAD43746.1| 789|Homo sapiens protocadherin alpha 7 s... 31 4.8
AF152484-1|AAD43745.1| 803|Homo sapiens protocadherin alpha 6 s... 31 4.8
AF152481-1|AAD43742.1| 824|Homo sapiens protocadherin alpha 3 s... 31 4.8
AF152315-1|AAD43709.1| 937|Homo sapiens protocadherin alpha 7 p... 31 4.8
AF152314-1|AAD43708.1| 950|Homo sapiens protocadherin alpha 6 p... 31 4.8
AF152311-1|AAD43705.1| 950|Homo sapiens protocadherin alpha 3 p... 31 4.8
AC005609-11|AAC34323.1| 824|Homo sapiens KIAA0345-like 11 protein. 31 4.8
AC005609-8|AAC34320.1| 803|Homo sapiens KIAA0345-like 8 protein. 31 4.8
AC005609-7|AAC34319.1| 789|Homo sapiens KIAA0345-like 7 protein. 31 4.8
AB209205-1|BAD92442.1| 430|Homo sapiens protocadherin alpha 6 i... 31 4.8
U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoi... 31 6.4
M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein. 31 6.4
BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein. 31 6.4
AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alph... 31 6.4
AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alph... 31 6.4
AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alph... 31 6.4
>M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P0 mRNA, complete cds. ).
Length = 317
Score = 151 bits (367), Expect = 2e-36
Identities = 76/125 (60%), Positives = 93/125 (74%), Gaps = 1/125 (0%)
Frame = +1
Query: 256 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 435
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 436 LNISPFSYGLVVKQVYDSGTIFAPEFWDIKPEDLRAKFQAG-SC*CSCSFLLGYWLPQLI 612
LNISPFS+GLV++QV+D+G+I+ PE DI E L ++F G S +GY +
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGY---PTV 234
Query: 613 ASAPH 627
AS PH
Sbjct: 235 ASVPH 239
Score = 148 bits (359), Expect = 2e-35
Identities = 69/92 (75%), Positives = 80/92 (86%)
Frame = +2
Query: 2 DNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTR 181
DNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+
Sbjct: 33 DNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTK 92
Query: 182 GDLVEVRDKLLENKVQAPARPGAIAHCQSSFP 277
DL E+RD LL NKV A AR GAIA C+ + P
Sbjct: 93 EDLTEIRDMLLANKVPAAARAGAIAPCEVTVP 124
>BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 151 bits (367), Expect = 2e-36
Identities = 76/125 (60%), Positives = 93/125 (74%), Gaps = 1/125 (0%)
Frame = +1
Query: 256 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 435
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 436 LNISPFSYGLVVKQVYDSGTIFAPEFWDIKPEDLRAKFQAG-SC*CSCSFLLGYWLPQLI 612
LNISPFS+GLV++QV+D+G+I+ PE DI E L ++F G S +GY +
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGY---PTV 234
Query: 613 ASAPH 627
AS PH
Sbjct: 235 ASVPH 239
Score = 148 bits (359), Expect = 2e-35
Identities = 69/92 (75%), Positives = 80/92 (86%)
Frame = +2
Query: 2 DNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTR 181
DNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+
Sbjct: 33 DNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTK 92
Query: 182 GDLVEVRDKLLENKVQAPARPGAIAHCQSSFP 277
DL E+RD LL NKV A AR GAIA C+ + P
Sbjct: 93 EDLTEIRDMLLANKVPAAARAGAIAPCEVTVP 124
>BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 151 bits (367), Expect = 2e-36
Identities = 76/125 (60%), Positives = 93/125 (74%), Gaps = 1/125 (0%)
Frame = +1
Query: 256 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 435
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 436 LNISPFSYGLVVKQVYDSGTIFAPEFWDIKPEDLRAKFQAG-SC*CSCSFLLGYWLPQLI 612
LNISPFS+GLV++QV+D+G+I+ PE DI E L ++F G S +GY +
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGY---PTV 234
Query: 613 ASAPH 627
AS PH
Sbjct: 235 ASVPH 239
Score = 148 bits (359), Expect = 2e-35
Identities = 69/92 (75%), Positives = 80/92 (86%)
Frame = +2
Query: 2 DNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTR 181
DNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+
Sbjct: 33 DNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTK 92
Query: 182 GDLVEVRDKLLENKVQAPARPGAIAHCQSSFP 277
DL E+RD LL NKV A AR GAIA C+ + P
Sbjct: 93 EDLTEIRDMLLANKVPAAARAGAIAPCEVTVP 124
>BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 151 bits (367), Expect = 2e-36
Identities = 76/125 (60%), Positives = 93/125 (74%), Gaps = 1/125 (0%)
Frame = +1
Query: 256 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 435
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 436 LNISPFSYGLVVKQVYDSGTIFAPEFWDIKPEDLRAKFQAG-SC*CSCSFLLGYWLPQLI 612
LNISPFS+GLV++QV+D+G+I+ PE DI E L ++F G S +GY +
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGY---PTV 234
Query: 613 ASAPH 627
AS PH
Sbjct: 235 ASVPH 239
Score = 148 bits (359), Expect = 2e-35
Identities = 69/92 (75%), Positives = 80/92 (86%)
Frame = +2
Query: 2 DNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTR 181
DNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+
Sbjct: 33 DNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTK 92
Query: 182 GDLVEVRDKLLENKVQAPARPGAIAHCQSSFP 277
DL E+RD LL NKV A AR GAIA C+ + P
Sbjct: 93 EDLTEIRDMLLANKVPAAARAGAIAPCEVTVP 124
>BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 151 bits (367), Expect = 2e-36
Identities = 76/125 (60%), Positives = 93/125 (74%), Gaps = 1/125 (0%)
Frame = +1
Query: 256 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 435
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 436 LNISPFSYGLVVKQVYDSGTIFAPEFWDIKPEDLRAKFQAG-SC*CSCSFLLGYWLPQLI 612
LNISPFS+GLV++QV+D+G+I+ PE DI E L ++F G S +GY +
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGY---PTV 234
Query: 613 ASAPH 627
AS PH
Sbjct: 235 ASVPH 239
Score = 148 bits (359), Expect = 2e-35
Identities = 69/92 (75%), Positives = 80/92 (86%)
Frame = +2
Query: 2 DNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTR 181
DNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+
Sbjct: 33 DNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTK 92
Query: 182 GDLVEVRDKLLENKVQAPARPGAIAHCQSSFP 277
DL E+RD LL NKV A AR GAIA C+ + P
Sbjct: 93 EDLTEIRDMLLANKVPAAARAGAIAPCEVTVP 124
>BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 151 bits (367), Expect = 2e-36
Identities = 76/125 (60%), Positives = 93/125 (74%), Gaps = 1/125 (0%)
Frame = +1
Query: 256 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 435
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 436 LNISPFSYGLVVKQVYDSGTIFAPEFWDIKPEDLRAKFQAG-SC*CSCSFLLGYWLPQLI 612
LNISPFS+GLV++QV+D+G+I+ PE DI E L ++F G S +GY +
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGY---PTV 234
Query: 613 ASAPH 627
AS PH
Sbjct: 235 ASVPH 239
Score = 148 bits (359), Expect = 2e-35
Identities = 69/92 (75%), Positives = 80/92 (86%)
Frame = +2
Query: 2 DNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTR 181
DNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+
Sbjct: 33 DNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTK 92
Query: 182 GDLVEVRDKLLENKVQAPARPGAIAHCQSSFP 277
DL E+RD LL NKV A AR GAIA C+ + P
Sbjct: 93 EDLTEIRDMLLANKVPAAARAGAIAPCEVTVP 124
>BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 151 bits (367), Expect = 2e-36
Identities = 76/125 (60%), Positives = 93/125 (74%), Gaps = 1/125 (0%)
Frame = +1
Query: 256 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 435
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 436 LNISPFSYGLVVKQVYDSGTIFAPEFWDIKPEDLRAKFQAG-SC*CSCSFLLGYWLPQLI 612
LNISPFS+GLV++QV+D+G+I+ PE DI E L ++F G S +GY +
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGY---PTV 234
Query: 613 ASAPH 627
AS PH
Sbjct: 235 ASVPH 239
Score = 148 bits (359), Expect = 2e-35
Identities = 69/92 (75%), Positives = 80/92 (86%)
Frame = +2
Query: 2 DNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTR 181
DNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+
Sbjct: 33 DNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTK 92
Query: 182 GDLVEVRDKLLENKVQAPARPGAIAHCQSSFP 277
DL E+RD LL NKV A AR GAIA C+ + P
Sbjct: 93 EDLTEIRDMLLANKVPAAARAGAIAPCEVTVP 124
>BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 151 bits (367), Expect = 2e-36
Identities = 76/125 (60%), Positives = 93/125 (74%), Gaps = 1/125 (0%)
Frame = +1
Query: 256 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 435
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 436 LNISPFSYGLVVKQVYDSGTIFAPEFWDIKPEDLRAKFQAG-SC*CSCSFLLGYWLPQLI 612
LNISPFS+GLV++QV+D+G+I+ PE DI E L ++F G S +GY +
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGY---PTV 234
Query: 613 ASAPH 627
AS PH
Sbjct: 235 ASVPH 239
Score = 148 bits (359), Expect = 2e-35
Identities = 69/92 (75%), Positives = 80/92 (86%)
Frame = +2
Query: 2 DNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTR 181
DNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+
Sbjct: 33 DNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTK 92
Query: 182 GDLVEVRDKLLENKVQAPARPGAIAHCQSSFP 277
DL E+RD LL NKV A AR GAIA C+ + P
Sbjct: 93 EDLTEIRDMLLANKVPAAARAGAIAPCEVTVP 124
>BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 151 bits (367), Expect = 2e-36
Identities = 76/125 (60%), Positives = 93/125 (74%), Gaps = 1/125 (0%)
Frame = +1
Query: 256 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 435
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 436 LNISPFSYGLVVKQVYDSGTIFAPEFWDIKPEDLRAKFQAG-SC*CSCSFLLGYWLPQLI 612
LNISPFS+GLV++QV+D+G+I+ PE DI E L ++F G S +GY +
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGY---PTV 234
Query: 613 ASAPH 627
AS PH
Sbjct: 235 ASVPH 239
Score = 148 bits (359), Expect = 2e-35
Identities = 69/92 (75%), Positives = 80/92 (86%)
Frame = +2
Query: 2 DNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTR 181
DNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+
Sbjct: 33 DNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTK 92
Query: 182 GDLVEVRDKLLENKVQAPARPGAIAHCQSSFP 277
DL E+RD LL NKV A AR GAIA C+ + P
Sbjct: 93 EDLTEIRDMLLANKVPAAARAGAIAPCEVTVP 124
>BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 151 bits (367), Expect = 2e-36
Identities = 76/125 (60%), Positives = 93/125 (74%), Gaps = 1/125 (0%)
Frame = +1
Query: 256 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 435
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 436 LNISPFSYGLVVKQVYDSGTIFAPEFWDIKPEDLRAKFQAG-SC*CSCSFLLGYWLPQLI 612
LNISPFS+GLV++QV+D+G+I+ PE DI E L ++F G S +GY +
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGY---PTV 234
Query: 613 ASAPH 627
AS PH
Sbjct: 235 ASVPH 239
Score = 148 bits (359), Expect = 2e-35
Identities = 69/92 (75%), Positives = 80/92 (86%)
Frame = +2
Query: 2 DNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTR 181
DNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+
Sbjct: 33 DNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTK 92
Query: 182 GDLVEVRDKLLENKVQAPARPGAIAHCQSSFP 277
DL E+RD LL NKV A AR GAIA C+ + P
Sbjct: 93 EDLTEIRDMLLANKVPAAARAGAIAPCEVTVP 124
>BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 151 bits (367), Expect = 2e-36
Identities = 76/125 (60%), Positives = 93/125 (74%), Gaps = 1/125 (0%)
Frame = +1
Query: 256 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 435
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 436 LNISPFSYGLVVKQVYDSGTIFAPEFWDIKPEDLRAKFQAG-SC*CSCSFLLGYWLPQLI 612
LNISPFS+GLV++QV+D+G+I+ PE DI E L ++F G S +GY +
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGY---PTV 234
Query: 613 ASAPH 627
AS PH
Sbjct: 235 ASVPH 239
Score = 148 bits (359), Expect = 2e-35
Identities = 69/92 (75%), Positives = 80/92 (86%)
Frame = +2
Query: 2 DNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTR 181
DNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+
Sbjct: 33 DNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTK 92
Query: 182 GDLVEVRDKLLENKVQAPARPGAIAHCQSSFP 277
DL E+RD LL NKV A AR GAIA C+ + P
Sbjct: 93 EDLTEIRDMLLANKVPAAARAGAIAPCEVTVP 124
>BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 151 bits (367), Expect = 2e-36
Identities = 76/125 (60%), Positives = 93/125 (74%), Gaps = 1/125 (0%)
Frame = +1
Query: 256 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 435
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 436 LNISPFSYGLVVKQVYDSGTIFAPEFWDIKPEDLRAKFQAG-SC*CSCSFLLGYWLPQLI 612
LNISPFS+GLV++QV+D+G+I+ PE DI E L ++F G S +GY +
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGY---PTV 234
Query: 613 ASAPH 627
AS PH
Sbjct: 235 ASVPH 239
Score = 148 bits (359), Expect = 2e-35
Identities = 69/92 (75%), Positives = 80/92 (86%)
Frame = +2
Query: 2 DNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTR 181
DNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+
Sbjct: 33 DNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTK 92
Query: 182 GDLVEVRDKLLENKVQAPARPGAIAHCQSSFP 277
DL E+RD LL NKV A AR GAIA C+ + P
Sbjct: 93 EDLTEIRDMLLANKVPAAARAGAIAPCEVTVP 124
>BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 151 bits (367), Expect = 2e-36
Identities = 76/125 (60%), Positives = 93/125 (74%), Gaps = 1/125 (0%)
Frame = +1
Query: 256 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 435
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 436 LNISPFSYGLVVKQVYDSGTIFAPEFWDIKPEDLRAKFQAG-SC*CSCSFLLGYWLPQLI 612
LNISPFS+GLV++QV+D+G+I+ PE DI E L ++F G S +GY +
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGY---PTV 234
Query: 613 ASAPH 627
AS PH
Sbjct: 235 ASVPH 239
Score = 148 bits (359), Expect = 2e-35
Identities = 69/92 (75%), Positives = 80/92 (86%)
Frame = +2
Query: 2 DNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTR 181
DNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+
Sbjct: 33 DNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTK 92
Query: 182 GDLVEVRDKLLENKVQAPARPGAIAHCQSSFP 277
DL E+RD LL NKV A AR GAIA C+ + P
Sbjct: 93 EDLTEIRDMLLANKVPAAARAGAIAPCEVTVP 124
>AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 151 bits (367), Expect = 2e-36
Identities = 76/125 (60%), Positives = 93/125 (74%), Gaps = 1/125 (0%)
Frame = +1
Query: 256 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 435
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 436 LNISPFSYGLVVKQVYDSGTIFAPEFWDIKPEDLRAKFQAG-SC*CSCSFLLGYWLPQLI 612
LNISPFS+GLV++QV+D+G+I+ PE DI E L ++F G S +GY +
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGY---PTV 234
Query: 613 ASAPH 627
AS PH
Sbjct: 235 ASVPH 239
Score = 147 bits (356), Expect = 5e-35
Identities = 68/92 (73%), Positives = 80/92 (86%)
Frame = +2
Query: 2 DNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTR 181
DNVGS+QMQQIR+SLRG ++VLMG+NTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+
Sbjct: 33 DNVGSKQMQQIRMSLRGKAVVLMGRNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTK 92
Query: 182 GDLVEVRDKLLENKVQAPARPGAIAHCQSSFP 277
DL E+RD LL NKV A AR GAIA C+ + P
Sbjct: 93 EDLTEIRDMLLANKVPAAARAGAIAPCEVTVP 124
>AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein.
Length = 317
Score = 151 bits (367), Expect = 2e-36
Identities = 76/125 (60%), Positives = 93/125 (74%), Gaps = 1/125 (0%)
Frame = +1
Query: 256 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 435
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 436 LNISPFSYGLVVKQVYDSGTIFAPEFWDIKPEDLRAKFQAG-SC*CSCSFLLGYWLPQLI 612
LNISPFS+GLV++QV+D+G+I+ PE DI E L ++F G S +GY +
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGY---PTV 234
Query: 613 ASAPH 627
AS PH
Sbjct: 235 ASVPH 239
Score = 148 bits (359), Expect = 2e-35
Identities = 69/92 (75%), Positives = 80/92 (86%)
Frame = +2
Query: 2 DNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTR 181
DNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+
Sbjct: 33 DNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTK 92
Query: 182 GDLVEVRDKLLENKVQAPARPGAIAHCQSSFP 277
DL E+RD LL NKV A AR GAIA C+ + P
Sbjct: 93 EDLTEIRDMLLANKVPAAARAGAIAPCEVTVP 124
>BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein.
Length = 255
Score = 148 bits (359), Expect = 2e-35
Identities = 69/92 (75%), Positives = 80/92 (86%)
Frame = +2
Query: 2 DNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTR 181
DNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+
Sbjct: 33 DNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTK 92
Query: 182 GDLVEVRDKLLENKVQAPARPGAIAHCQSSFP 277
DL E+RD LL NKV A AR GAIA C+ + P
Sbjct: 93 EDLTEIRDMLLANKVPAAARAGAIAPCEVTVP 124
Score = 64.9 bits (151), Expect = 3e-10
Identities = 29/38 (76%), Positives = 32/38 (84%)
Frame = +1
Query: 256 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 369
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 155
>AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 148 bits (359), Expect = 2e-35
Identities = 69/92 (75%), Positives = 80/92 (86%)
Frame = +2
Query: 2 DNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTR 181
DNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+
Sbjct: 33 DNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTK 92
Query: 182 GDLVEVRDKLLENKVQAPARPGAIAHCQSSFP 277
DL E+RD LL NKV A AR GAIA C+ + P
Sbjct: 93 EDLTEIRDMLLANKVPAAARAGAIAPCEVTVP 124
Score = 148 bits (359), Expect = 2e-35
Identities = 75/125 (60%), Positives = 92/125 (73%), Gaps = 1/125 (0%)
Frame = +1
Query: 256 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 435
P V +PA NTGLGPEKTSF QAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFSQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 436 LNISPFSYGLVVKQVYDSGTIFAPEFWDIKPEDLRAKFQAG-SC*CSCSFLLGYWLPQLI 612
LNISPFS+GLV++QV+D+G+I+ PE DI E L ++F G S +GY +
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGY---PTV 234
Query: 613 ASAPH 627
AS PH
Sbjct: 235 ASVPH 239
>AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein.
Length = 317
Score = 147 bits (357), Expect = 4e-35
Identities = 75/125 (60%), Positives = 91/125 (72%), Gaps = 1/125 (0%)
Frame = +1
Query: 256 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 435
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 436 LNISPFSYGLVVKQVYDSGTIFAPEFWDIKPEDLRAKFQAG-SC*CSCSFLLGYWLPQLI 612
LNISPFS+GLV++QV+D+G+I+ PE D E L ++F G S GY +
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEVLDKTEETLHSRFLEGVRNVASVCLQTGY---PTV 234
Query: 613 ASAPH 627
AS PH
Sbjct: 235 ASVPH 239
Score = 145 bits (351), Expect = 2e-34
Identities = 69/92 (75%), Positives = 78/92 (84%)
Frame = +2
Query: 2 DNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTR 181
DNVGS+QMQQIR+SLRG +VLMGKNTMMRKAI+ HL+NNPALEKLLPHI GNVGFVFT+
Sbjct: 33 DNVGSKQMQQIRMSLRGKVVVLMGKNTMMRKAIRGHLENNPALEKLLPHIWGNVGFVFTK 92
Query: 182 GDLVEVRDKLLENKVQAPARPGAIAHCQSSFP 277
DL E+RD LL NKV A AR GAIA C+ + P
Sbjct: 93 EDLTEIRDMLLANKVPAAARAGAIAPCEVTVP 124
>BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein.
Length = 254
Score = 140 bits (338), Expect = 7e-33
Identities = 67/92 (72%), Positives = 79/92 (85%)
Frame = +2
Query: 2 DNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTR 181
DNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI+ HL+NNPALEKLLP ++GNVGFVFT+
Sbjct: 33 DNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLP-LRGNVGFVFTK 91
Query: 182 GDLVEVRDKLLENKVQAPARPGAIAHCQSSFP 277
DL E+RD LL NKV A AR GAIA C+ + P
Sbjct: 92 EDLTEIRDMLLANKVPAAARAGAIAPCEVTVP 123
Score = 64.9 bits (151), Expect = 3e-10
Identities = 29/38 (76%), Positives = 32/38 (84%)
Frame = +1
Query: 256 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 369
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+
Sbjct: 117 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 154
>BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein.
Length = 157
Score = 85.0 bits (201), Expect = 3e-16
Identities = 45/81 (55%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Frame = +1
Query: 388 KPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEFWDIKPEDLRAKFQAG-SC 564
K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE DI E L ++F G
Sbjct: 2 KTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRN 61
Query: 565 *CSCSFLLGYWLPQLIASAPH 627
S +GY +AS PH
Sbjct: 62 VASVCLQIGY---PTVASVPH 79
>BC006504-1|AAH06504.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 37.9 bits (84), Expect = 0.042
Identities = 16/69 (23%), Positives = 35/69 (50%)
Frame = +1
Query: 325 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 504
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 505 PEFWDIKPE 531
+ D PE
Sbjct: 216 QQMGDDLPE 224
>BC003013-1|AAH03013.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 37.9 bits (84), Expect = 0.042
Identities = 16/69 (23%), Positives = 35/69 (50%)
Frame = +1
Query: 325 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 504
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 505 PEFWDIKPE 531
+ D PE
Sbjct: 216 QQMGDDLPE 224
>AY303790-1|AAP68821.1| 239|Homo sapiens acidic ribosomal protein
PO-like protein.
Length = 239
Score = 37.9 bits (84), Expect = 0.042
Identities = 16/69 (23%), Positives = 35/69 (50%)
Frame = +1
Query: 325 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 504
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 505 PEFWDIKPE 531
+ D PE
Sbjct: 216 QQMGDDLPE 224
>AL035413-12|CAI22233.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 37.9 bits (84), Expect = 0.042
Identities = 16/69 (23%), Positives = 35/69 (50%)
Frame = +1
Query: 325 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 504
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 505 PEFWDIKPE 531
+ D PE
Sbjct: 216 QQMGDDLPE 224
>AK027569-1|BAB55205.1| 239|Homo sapiens protein ( Homo sapiens
cDNA FLJ14663 fis, clone NT2RP2002862, weakly similar to
60S ACIDIC RIBOSOMAL PROTEIN P0. ).
Length = 239
Score = 37.9 bits (84), Expect = 0.042
Identities = 16/69 (23%), Positives = 35/69 (50%)
Frame = +1
Query: 325 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 504
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 505 PEFWDIKPE 531
+ D PE
Sbjct: 216 QQMGDDLPE 224
>AF173378-1|AAD52608.1| 239|Homo sapiens 60S acidic ribosomal
protein PO protein.
Length = 239
Score = 37.9 bits (84), Expect = 0.042
Identities = 16/69 (23%), Positives = 35/69 (50%)
Frame = +1
Query: 325 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 504
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 505 PEFWDIKPE 531
+ D PE
Sbjct: 216 QQMGDDLPE 224
>AF152479-1|AAD43740.1| 807|Homo sapiens protocadherin alpha 1
short form protein protein.
Length = 807
Score = 33.5 bits (73), Expect = 0.91
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 20 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 172
++ Q ++S R + + +G N ++ + D DN PAL L P + G +G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTIGAV 577
>AF152305-1|AAD43699.1| 950|Homo sapiens protocadherin alpha 1
protein.
Length = 950
Score = 33.5 bits (73), Expect = 0.91
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 20 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 172
++ Q ++S R + + +G N ++ + D DN PAL L P + G +G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTIGAV 577
>AC005609-13|AAC34325.1| 807|Homo sapiens KIAA0345-like 13 protein.
Length = 807
Score = 33.5 bits (73), Expect = 0.91
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 20 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 172
++ Q ++S R + + +G N ++ + D DN PAL L P + G +G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTIGAV 577
>BC012801-1|AAH12801.1| 666|Homo sapiens gamma tubulin ring complex
protein (76p gene) protein.
Length = 666
Score = 33.1 bits (72), Expect = 1.2
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +1
Query: 34 PYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRETVAT 147
P L ++Y HGK+H DA + P +++SPRE A+
Sbjct: 412 PLLHLTIEY--HGKEHKDATQAREGPSRETSPREAPAS 447
>BC009870-1|AAH09870.1| 666|Homo sapiens gamma tubulin ring complex
protein (76p gene) protein.
Length = 666
Score = 33.1 bits (72), Expect = 1.2
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +1
Query: 34 PYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRETVAT 147
P L ++Y HGK+H DA + P +++SPRE A+
Sbjct: 412 PLLHLTIEY--HGKEHKDATQAREGPSRETSPREAPAS 447
>AK127306-1|BAC86926.1| 254|Homo sapiens protein ( Homo sapiens
cDNA FLJ45374 fis, clone BRHIP3019643, highly similar
to Homo sapiens gamma tubulin ring complex protein (76p
gene) (76P). ).
Length = 254
Score = 33.1 bits (72), Expect = 1.2
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +1
Query: 34 PYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRETVAT 147
P L ++Y HGK+H DA + P +++SPRE A+
Sbjct: 34 PLLHLTIEY--HGKEHKDATQAREGPSRETSPREAPAS 69
>BC104804-1|AAI04805.1| 950|Homo sapiens protocadherin alpha 9
protein.
Length = 950
Score = 31.9 bits (69), Expect = 2.8
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 20 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 172
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>BC104802-1|AAI04803.1| 950|Homo sapiens protocadherin alpha 9
protein.
Length = 950
Score = 31.9 bits (69), Expect = 2.8
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 20 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 172
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>BC033735-1|AAH33735.1| 890|Homo sapiens PCDHA5 protein protein.
Length = 890
Score = 31.9 bits (69), Expect = 2.8
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 20 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 172
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 528 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LVPRVGGTGGAV 576
>AJ007610-1|CAC22257.1| 950|Homo sapiens protocadherin alpha 9
protein.
Length = 950
Score = 31.9 bits (69), Expect = 2.8
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 20 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 172
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>AF152487-1|AAD43748.1| 842|Homo sapiens protocadherin alpha 9
short form protein protein.
Length = 842
Score = 31.9 bits (69), Expect = 2.8
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 20 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 172
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>AF152483-1|AAD43744.1| 816|Homo sapiens protocadherin alpha 5
short form protein protein.
Length = 816
Score = 31.9 bits (69), Expect = 2.8
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 20 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 172
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 528 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LVPRVGGTGGAV 576
>AF152317-1|AAD43711.1| 950|Homo sapiens protocadherin alpha 9
protein.
Length = 950
Score = 31.9 bits (69), Expect = 2.8
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 20 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 172
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>AF152313-1|AAD43707.1| 936|Homo sapiens protocadherin alpha 5
protein.
Length = 936
Score = 31.9 bits (69), Expect = 2.8
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 20 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 172
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 528 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LVPRVGGTGGAV 576
>AC005609-9|AAC34321.1| 816|Homo sapiens KIAA0345-like 9 protein.
Length = 816
Score = 31.9 bits (69), Expect = 2.8
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 20 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 172
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 528 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LVPRVGGTGGAV 576
>AC005609-5|AAC34313.1| 842|Homo sapiens KIAA0345-like 5 protein.
Length = 842
Score = 31.9 bits (69), Expect = 2.8
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 20 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 172
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>AB002343-1|BAA20803.2| 845|Homo sapiens KIAA0345 protein.
Length = 845
Score = 31.9 bits (69), Expect = 2.8
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 20 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 172
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 532 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 580
>BC129807-1|AAI29808.1| 824|Homo sapiens protocadherin alpha 3
protein.
Length = 824
Score = 31.1 bits (67), Expect = 4.8
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 20 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 172
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LMPRVGGIGGAV 577
>BC069064-1|AAH69064.1| 824|Homo sapiens PCDHA3 protein protein.
Length = 824
Score = 31.1 bits (67), Expect = 4.8
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 20 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 172
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LMPRVGGIGGAV 577
>BC036674-1|AAH36674.1| 950|Homo sapiens PCDHA6 protein protein.
Length = 950
Score = 31.1 bits (67), Expect = 4.8
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 20 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 172
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AF152485-1|AAD43746.1| 789|Homo sapiens protocadherin alpha 7
short form protein protein.
Length = 789
Score = 31.1 bits (67), Expect = 4.8
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 20 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 172
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AF152484-1|AAD43745.1| 803|Homo sapiens protocadherin alpha 6
short form protein protein.
Length = 803
Score = 31.1 bits (67), Expect = 4.8
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 20 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 172
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AF152481-1|AAD43742.1| 824|Homo sapiens protocadherin alpha 3
short form protein protein.
Length = 824
Score = 31.1 bits (67), Expect = 4.8
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 20 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 172
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LMPRVGGIGGAV 577
>AF152315-1|AAD43709.1| 937|Homo sapiens protocadherin alpha 7
protein.
Length = 937
Score = 31.1 bits (67), Expect = 4.8
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 20 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 172
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AF152314-1|AAD43708.1| 950|Homo sapiens protocadherin alpha 6
protein.
Length = 950
Score = 31.1 bits (67), Expect = 4.8
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 20 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 172
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AF152311-1|AAD43705.1| 950|Homo sapiens protocadherin alpha 3
protein.
Length = 950
Score = 31.1 bits (67), Expect = 4.8
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 20 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 172
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LMPRVGGIGGAV 577
>AC005609-11|AAC34323.1| 824|Homo sapiens KIAA0345-like 11 protein.
Length = 824
Score = 31.1 bits (67), Expect = 4.8
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 20 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 172
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LMPRVGGIGGAV 577
>AC005609-8|AAC34320.1| 803|Homo sapiens KIAA0345-like 8 protein.
Length = 803
Score = 31.1 bits (67), Expect = 4.8
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 20 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 172
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AC005609-7|AAC34319.1| 789|Homo sapiens KIAA0345-like 7 protein.
Length = 789
Score = 31.1 bits (67), Expect = 4.8
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 20 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 172
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AB209205-1|BAD92442.1| 430|Homo sapiens protocadherin alpha 6
isoform 2 precursor variant protein.
Length = 430
Score = 31.1 bits (67), Expect = 4.8
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 20 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 172
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 178 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 226
>U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoid
antigen 2/type XVII collagen protein.
Length = 1497
Score = 30.7 bits (66), Expect = 6.4
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 488 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 369
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein.
Length = 1532
Score = 30.7 bits (66), Expect = 6.4
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 488 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 369
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 276 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 315
>BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein.
Length = 393
Score = 30.7 bits (66), Expect = 6.4
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 488 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 369
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alpha 1
protein.
Length = 417
Score = 30.7 bits (66), Expect = 6.4
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 488 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 369
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1497
Score = 30.7 bits (66), Expect = 6.4
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 488 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 369
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1415
Score = 30.7 bits (66), Expect = 6.4
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 488 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 369
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,272,611
Number of Sequences: 237096
Number of extensions: 3322064
Number of successful extensions: 15311
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 14852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15310
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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