Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30896
         (359 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       27   0.058
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   2.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   2.9  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   3.8  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    20   6.7  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    20   8.8  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          20   8.8  

>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 27.1 bits (57), Expect = 0.058
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +1

Query: 37  YKVEDPHTGDNKYQHETRDGDVVKGVYSLHEADGTIRTVKYAAD 168
           Y VE  +    + +  T DG +V     +   DG++R V+Y AD
Sbjct: 195 YVVEGRNYRKYRVEERTSDGFIVGEYGVVSHDDGSLRGVRYTAD 238


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 6/28 (21%), Positives = 16/28 (57%)
 Frame = -1

Query: 155 LTVLMVPSASCRLYTPFTTSPSRVSCWY 72
           + +L+  +    L  P+  +P+R+ C++
Sbjct: 1   MKLLLAVATIITLLQPYDATPARIVCYF 28


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
 Frame = -1

Query: 206 PSRCTSALNPE--CLSAAYLTVLMVPSASCRLYTPFTTSPS 90
           P+   +AL P      AAYL    V +A+ + +    TSPS
Sbjct: 130 PAAAAAALLPPQTAAMAAYLNAAAVAAAAQQSHRLMMTSPS 170


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 6/10 (60%), Positives = 6/10 (60%)
 Frame = -2

Query: 139 YHRPRADCTH 110
           YH P  DC H
Sbjct: 351 YHTPEPDCIH 360


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -1

Query: 113 TPFTTSPSRVSCWYLLS 63
           TP T     ++CW L S
Sbjct: 312 TPTTVMSPTINCWSLTS 328


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 6/20 (30%), Positives = 11/20 (55%)
 Frame = +1

Query: 19  PKYAFEYKVEDPHTGDNKYQ 78
           P++ F Y+    ++  N YQ
Sbjct: 209 PQFNFNYQYNQAYSNYNNYQ 228


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 6/20 (30%), Positives = 11/20 (55%)
 Frame = +1

Query: 19  PKYAFEYKVEDPHTGDNKYQ 78
           P++ F Y+    ++  N YQ
Sbjct: 229 PQFNFNYQYNQAYSNYNNYQ 248


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,449
Number of Sequences: 336
Number of extensions: 1659
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7299165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)