Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30896
(359 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL359257-2|CAI39759.1| 4640|Homo sapiens AC001226.5 protein. 30 2.5
AL159158-1|CAI16842.1| 4640|Homo sapiens AC001226.5 protein. 30 2.5
AL159154-1|CAH73736.1| 4640|Homo sapiens AC001226.5 protein. 30 2.5
AF075587-1|AAC39928.1| 4641|Homo sapiens protein associated with... 30 2.5
S75768-1|AAD14188.1| 595|Homo sapiens CD30 antigen protein. 28 7.6
M83554-1|AAA51947.1| 595|Homo sapiens CD30 antigen protein. 28 7.6
BC107778-1|AAI07779.1| 803|Homo sapiens KIAA0406 protein protein. 28 7.6
BC013755-1|AAH13755.1| 1089|Homo sapiens KIAA0406 protein. 28 7.6
BC013121-1|AAH13121.1| 1089|Homo sapiens KIAA0406 protein. 28 7.6
AY498860-1|AAR32099.1| 595|Homo sapiens tumor necrosis factor r... 28 7.6
AL357835-1|CAH73719.1| 595|Homo sapiens tumor necrosis factor r... 28 7.6
AL109823-1|CAI19022.1| 1089|Homo sapiens KIAA0406 protein. 28 7.6
AJ289159-1|CAC16652.1| 595|Homo sapiens cytokine receptor CD30 ... 28 7.6
AB007866-1|BAA23702.2| 1095|Homo sapiens KIAA0406 protein protein. 28 7.6
>AL359257-2|CAI39759.1| 4640|Homo sapiens AC001226.5 protein.
Length = 4640
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 22 KYAFEYKVEDP-HTGDNKYQHETRDGDVVKGVYSLHEADGTIRTVK 156
+Y E V+D H GD+ + H ++VKG Y+ ++ I ++
Sbjct: 1733 EYELEVLVDDSEHAGDSTHSHRWTSLELVKGTYTTDDSPSDIAEIR 1778
>AL159158-1|CAI16842.1| 4640|Homo sapiens AC001226.5 protein.
Length = 4640
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 22 KYAFEYKVEDP-HTGDNKYQHETRDGDVVKGVYSLHEADGTIRTVK 156
+Y E V+D H GD+ + H ++VKG Y+ ++ I ++
Sbjct: 1733 EYELEVLVDDSEHAGDSTHSHRWTSLELVKGTYTTDDSPSDIAEIR 1778
>AL159154-1|CAH73736.1| 4640|Homo sapiens AC001226.5 protein.
Length = 4640
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 22 KYAFEYKVEDP-HTGDNKYQHETRDGDVVKGVYSLHEADGTIRTVK 156
+Y E V+D H GD+ + H ++VKG Y+ ++ I ++
Sbjct: 1733 EYELEVLVDDSEHAGDSTHSHRWTSLELVKGTYTTDDSPSDIAEIR 1778
>AF075587-1|AAC39928.1| 4641|Homo sapiens protein associated with Myc
protein.
Length = 4641
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 22 KYAFEYKVEDP-HTGDNKYQHETRDGDVVKGVYSLHEADGTIRTVK 156
+Y E V+D H GD+ + H ++VKG Y+ ++ I ++
Sbjct: 1733 EYELEVLVDDSEHAGDSTHSHRWTSLELVKGTYTTDDSPSDIAEIR 1778
>S75768-1|AAD14188.1| 595|Homo sapiens CD30 antigen protein.
Length = 595
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -2
Query: 133 RPRADCTHPSPRHRHGSRAGTCCRRCEDPLLCTRK 29
RP D H +P H + CC RC L T++
Sbjct: 23 RPFEDTCHGNPSHYYDKAVRRCCYRCPMGLFPTQQ 57
>M83554-1|AAA51947.1| 595|Homo sapiens CD30 antigen protein.
Length = 595
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -2
Query: 133 RPRADCTHPSPRHRHGSRAGTCCRRCEDPLLCTRK 29
RP D H +P H + CC RC L T++
Sbjct: 23 RPFEDTCHGNPSHYYDKAVRRCCYRCPMGLFPTQQ 57
>BC107778-1|AAI07779.1| 803|Homo sapiens KIAA0406 protein protein.
Length = 803
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = -1
Query: 194 TSALNPECLSAAYLTVLMVPSASCRLYTPFTTSPSRVSCWYLLSPV*GSSTLYSKAY 24
T L+ C+ L + S LY+P + P+ VS L+ + G STL AY
Sbjct: 79 TFVLSSTCVKEQELLQELFSELSACLYSPSSQKPAAVSEELKLAVIQGLSTLMHSAY 135
>BC013755-1|AAH13755.1| 1089|Homo sapiens KIAA0406 protein.
Length = 1089
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = -1
Query: 194 TSALNPECLSAAYLTVLMVPSASCRLYTPFTTSPSRVSCWYLLSPV*GSSTLYSKAY 24
T L+ C+ L + S LY+P + P+ VS L+ + G STL AY
Sbjct: 79 TFVLSSTCVKEQELLQELFSELSACLYSPSSQKPAAVSEELKLAVIQGLSTLMHSAY 135
>BC013121-1|AAH13121.1| 1089|Homo sapiens KIAA0406 protein.
Length = 1089
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = -1
Query: 194 TSALNPECLSAAYLTVLMVPSASCRLYTPFTTSPSRVSCWYLLSPV*GSSTLYSKAY 24
T L+ C+ L + S LY+P + P+ VS L+ + G STL AY
Sbjct: 79 TFVLSSTCVKEQELLQELFSELSACLYSPSSQKPAAVSEELKLAVIQGLSTLMHSAY 135
>AY498860-1|AAR32099.1| 595|Homo sapiens tumor necrosis factor
receptor superfamily, member 8 protein.
Length = 595
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -2
Query: 133 RPRADCTHPSPRHRHGSRAGTCCRRCEDPLLCTRK 29
RP D H +P H + CC RC L T++
Sbjct: 23 RPFEDTCHGNPSHYYDKAVRRCCYRCPMGLFPTQQ 57
>AL357835-1|CAH73719.1| 595|Homo sapiens tumor necrosis factor
receptor superfamily, member 8 protein.
Length = 595
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -2
Query: 133 RPRADCTHPSPRHRHGSRAGTCCRRCEDPLLCTRK 29
RP D H +P H + CC RC L T++
Sbjct: 23 RPFEDTCHGNPSHYYDKAVRRCCYRCPMGLFPTQQ 57
>AL109823-1|CAI19022.1| 1089|Homo sapiens KIAA0406 protein.
Length = 1089
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = -1
Query: 194 TSALNPECLSAAYLTVLMVPSASCRLYTPFTTSPSRVSCWYLLSPV*GSSTLYSKAY 24
T L+ C+ L + S LY+P + P+ VS L+ + G STL AY
Sbjct: 79 TFVLSSTCVKEQELLQELFSELSACLYSPSSQKPAAVSEELKLAVIQGLSTLMHSAY 135
>AJ289159-1|CAC16652.1| 595|Homo sapiens cytokine receptor CD30
protein.
Length = 595
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -2
Query: 133 RPRADCTHPSPRHRHGSRAGTCCRRCEDPLLCTRK 29
RP D H +P H + CC RC L T++
Sbjct: 23 RPFEDTCHGNPSHYYDKAVRRCCYRCPMGLFPTQQ 57
>AB007866-1|BAA23702.2| 1095|Homo sapiens KIAA0406 protein protein.
Length = 1095
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = -1
Query: 194 TSALNPECLSAAYLTVLMVPSASCRLYTPFTTSPSRVSCWYLLSPV*GSSTLYSKAY 24
T L+ C+ L + S LY+P + P+ VS L+ + G STL AY
Sbjct: 85 TFVLSSTCVKEQELLQELFSELSACLYSPSSQKPAAVSEELKLAVIQGLSTLMHSAY 141
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,182,065
Number of Sequences: 237096
Number of extensions: 926102
Number of successful extensions: 2219
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2219
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2190862868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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