Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30894
         (701 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.79 
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   5.6  
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    21   9.7  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   9.7  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   9.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 11/52 (21%), Positives = 22/52 (42%)
 Frame = +2

Query: 143  NPCNKETYAGPEPFSEPETQIVRNIMMENAKRMKLYVSFTLTVSTWFTPGVT 298
            NP  ++    PEP +    Q+   +    +    ++  +T   STW++   T
Sbjct: 997  NPSREDCTKPPEPVTPAPPQVTTGVDTGASSTEHMHPDWTTKPSTWWSSTTT 1048


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = -1

Query: 77  WHVSILFYATNDCFYCFLCIH 15
           WH   L +  N C + + C H
Sbjct: 130 WHRYTLSFIENYCQFLYNCFH 150


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 502 IARRSIPLCRSKELRQLQ 449
           + R S P C  +E++Q+Q
Sbjct: 72  VLRGSCPQCTPQEMKQIQ 89


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 605 SGIRRFPGVSFFED 646
           SG++  PGV  FED
Sbjct: 290 SGLKAPPGVEHFED 303


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +1

Query: 547 FYEGFQSNGESNSGKK 594
           F +GF+ NG+S++ +K
Sbjct: 196 FAKGFRENGKSSAKRK 211


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,579
Number of Sequences: 336
Number of extensions: 3794
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)