Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30894
         (701 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A...    79   1e-16
AY545988-1|AAS99341.1|  423|Anopheles gambiae carboxypeptidase B...    60   7e-11
AJ627286-1|CAF28572.1|  423|Anopheles gambiae carboxypeptidase B...    60   7e-11

>AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A
           protein.
          Length = 433

 Score = 79.4 bits (187), Expect = 1e-16
 Identities = 40/87 (45%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
 Frame = +2

Query: 2   NPDGYEYTRNSRNNRLWRKTRSKHAN-CYGVDGNRNYGFKWAVSGVSYNPCNKETYAGPE 178
           NPDGY YT   + NRLWRKTR  +   CYG D NRN+ F WA  G S N C+ +TY G E
Sbjct: 228 NPDGYAYT--FQVNRLWRKTRKAYGPFCYGADPNRNWDFHWAEQGTSNNACS-DTYHGSE 284

Query: 179 PFSEPETQIVRNIMMENAKRMKLYVSF 259
            FSE ET+ +   + +   ++  Y++F
Sbjct: 285 AFSEVETRSLAAFVEKLRGKLGAYIAF 311



 Score = 29.5 bits (63), Expect = 0.11
 Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
 Frame = +1

Query: 259 HSYGQYLVYPWGYTGDFLPKEWKKLDSLARAVSDAIQRVGGQPFKVMSA-GKWYPXXXXX 435
           HSY Q L++P+G TG       + L+ +A A   ++ +  G  +K  +     YP     
Sbjct: 312 HSYSQLLLFPYGDTGAHCGNH-QDLNEIAEATVKSLAKRYGTQYKYGNVIDAIYPASGSS 370

Query: 436 XXXXXXXXXVPYSYTMEL 489
                    V  +YT EL
Sbjct: 371 VDWSYGAQDVKIAYTYEL 388


>AY545988-1|AAS99341.1|  423|Anopheles gambiae carboxypeptidase B
           precursor protein.
          Length = 423

 Score = 60.1 bits (139), Expect = 7e-11
 Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
 Frame = +2

Query: 2   NPDGYEYTRNSRNNRLWRKTRSK-HANCYGVDGNRNYGFKWAVSGVSYNPCNKETYAGPE 178
           NPDGY YT     NRLWRK RS  +  CYGVD NRN+ F+W     + + C    +AG  
Sbjct: 227 NPDGYVYTHEQ--NRLWRKNRSPGNVLCYGVDLNRNFPFQW---DRTTSECT-NNFAGHA 280

Query: 179 PFSEPETQIVRNIMMENAKRMKLYVS 256
             SE ET+ +  +M +    +++Y++
Sbjct: 281 ASSENETKALIGLMDQYKAAIRMYLA 306



 Score = 50.4 bits (115), Expect = 5e-08
 Identities = 26/81 (32%), Positives = 38/81 (46%)
 Frame = +1

Query: 256 IHSYGQYLVYPWGYTGDFLPKEWKKLDSLARAVSDAIQRVGGQPFKVMSAGKWYPXXXXX 435
           +H+YG+ +++PWGY     P E   L  L     DA+   GG  ++V ++          
Sbjct: 307 VHTYGEMILWPWGYDFLHAPNE-DDLQRLGERARDALVAAGGPEYEVGNSADILYTASGA 365

Query: 436 XXXXXXXXXVPYSYTMELTDG 498
                    VPYSYT+ELT G
Sbjct: 366 TDDYAYSLGVPYSYTLELTGG 386


>AJ627286-1|CAF28572.1|  423|Anopheles gambiae carboxypeptidase B
           protein.
          Length = 423

 Score = 60.1 bits (139), Expect = 7e-11
 Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
 Frame = +2

Query: 2   NPDGYEYTRNSRNNRLWRKTRSK-HANCYGVDGNRNYGFKWAVSGVSYNPCNKETYAGPE 178
           NPDGY YT     NRLWRK RS  +  CYGVD NRN+ F+W     + + C    +AG  
Sbjct: 227 NPDGYVYTHEQ--NRLWRKNRSPGNVLCYGVDLNRNFPFQW---DRTTSECT-NNFAGHA 280

Query: 179 PFSEPETQIVRNIMMENAKRMKLYVS 256
             SE ET+ +  +M +    +++Y++
Sbjct: 281 ASSENETKALIGLMDQYKAAIRMYLA 306



 Score = 50.4 bits (115), Expect = 5e-08
 Identities = 26/81 (32%), Positives = 38/81 (46%)
 Frame = +1

Query: 256 IHSYGQYLVYPWGYTGDFLPKEWKKLDSLARAVSDAIQRVGGQPFKVMSAGKWYPXXXXX 435
           +H+YG+ +++PWGY     P E   L  L     DA+   GG  ++V ++          
Sbjct: 307 VHTYGEMILWPWGYDFLHAPNE-DDLQRLGERARDALVAAGGPEYEVGNSADILYTASGA 365

Query: 436 XXXXXXXXXVPYSYTMELTDG 498
                    VPYSYT+ELT G
Sbjct: 366 TDDYAYSLGVPYSYTLELTGG 386


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 742,713
Number of Sequences: 2352
Number of extensions: 15458
Number of successful extensions: 45
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)