Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30893
         (669 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469165-1|AAL68692.1|  226|Anopheles gambiae amylase protein.         25   2.2  
L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.     24   5.0  

>AF469165-1|AAL68692.1|  226|Anopheles gambiae amylase protein.
          Length = 226

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 29  KTGWITIHQWDVLVIMLVFWNLV 97
           + GW+  H+W V+  M+ F N V
Sbjct: 112 QNGWVCEHRWPVVRRMVSFRNFV 134


>L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.
          Length = 511

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 3/27 (11%)
 Frame = +2

Query: 23  PKKT---GWITIHQWDVLVIMLVFWNL 94
           P KT   GW+  H+W  +  M+ F NL
Sbjct: 380 PDKTCGGGWVCEHRWRQMYSMIHFRNL 406


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 710,820
Number of Sequences: 2352
Number of extensions: 13906
Number of successful extensions: 17
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)