Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30891
         (692 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   1.8  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    23   1.8  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   5.5  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   7.2  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 242 NDPEERHPWNQVPVCSFI 295
           N P  RHP +++P C  I
Sbjct: 376 NLPTHRHPQDEIPYCGKI 393


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 7/27 (25%), Positives = 16/27 (59%)
 Frame = +3

Query: 15  FIFEILYLITKTN*FCNDFTMAKYILL 95
           ++F++ YL  + +  CN+    K +L+
Sbjct: 202 YVFDLFYLSKRASDLCNEANKTKILLV 228


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 253 GKAPLEPSSGMFVH*YIPN 309
           GKA + PS+ +++H   PN
Sbjct: 99  GKAEVPPSNPIYIHPESPN 117


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +3

Query: 531 NKPGQGPWRGLFGIGKPLSSLRGETKNSLNR 623
           N P   PW     +G+   +  GETK    R
Sbjct: 196 NPPQIYPWMKRVHLGQSTVNANGETKRQRTR 226


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,101
Number of Sequences: 336
Number of extensions: 3663
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)