Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30891
(692 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY898804-1|AAX51890.1| 388|Homo sapiens XL protein. 33 1.3
AL132655-7|CAM28315.1| 720|Homo sapiens GNAS complex locus prot... 33 1.3
AL132655-6|CAI43073.2| 1037|Homo sapiens GNAS complex locus prot... 33 1.3
AL132655-5|CAI43074.2| 1023|Homo sapiens GNAS complex locus prot... 33 1.3
AL121917-8|CAI42566.2| 1037|Homo sapiens GNAS complex locus prot... 33 1.3
AL121917-7|CAI42567.2| 1023|Homo sapiens GNAS complex locus prot... 33 1.3
AL109840-9|CAI42932.2| 1037|Homo sapiens GNAS complex locus prot... 33 1.3
AL109840-8|CAI42933.2| 1023|Homo sapiens GNAS complex locus prot... 33 1.3
AJ251760-2|CAB83215.1| 388|Homo sapiens XLalphas protein protein. 33 1.3
AJ224868-1|CAA12165.1| 441|Homo sapiens GNAS1 protein. 33 1.3
AJ224867-1|CAA12164.1| 188|Homo sapiens GNSA1 protein. 33 1.3
>AY898804-1|AAX51890.1| 388|Homo sapiens XL protein.
Length = 388
Score = 32.7 bits (71), Expect = 1.3
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -3
Query: 420 HQRLSRKRRPVRNTLRTFILLVIWNKFERIEKRN*KAIRNI 298
H+R R+R+P RN LR F++ F R E KA R++
Sbjct: 293 HRRNRRRRKPQRNLLRNFLVQAFGGCFGRSESPQPKASRSL 333
>AL132655-7|CAM28315.1| 720|Homo sapiens GNAS complex locus
protein.
Length = 720
Score = 32.7 bits (71), Expect = 1.3
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -3
Query: 420 HQRLSRKRRPVRNTLRTFILLVIWNKFERIEKRN*KAIRNI 298
H+R R+R+P RN LR F++ F R E KA R++
Sbjct: 594 HRRNRRRRKPQRNLLRNFLVQAFGGCFGRSESPQPKASRSL 634
>AL132655-6|CAI43073.2| 1037|Homo sapiens GNAS complex locus
protein.
Length = 1037
Score = 32.7 bits (71), Expect = 1.3
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -3
Query: 420 HQRLSRKRRPVRNTLRTFILLVIWNKFERIEKRN*KAIRNI 298
H+R R+R+P RN LR F++ F R E KA R++
Sbjct: 594 HRRNRRRRKPQRNLLRNFLVQAFGGCFGRSESPQPKASRSL 634
>AL132655-5|CAI43074.2| 1023|Homo sapiens GNAS complex locus
protein.
Length = 1023
Score = 32.7 bits (71), Expect = 1.3
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -3
Query: 420 HQRLSRKRRPVRNTLRTFILLVIWNKFERIEKRN*KAIRNI 298
H+R R+R+P RN LR F++ F R E KA R++
Sbjct: 594 HRRNRRRRKPQRNLLRNFLVQAFGGCFGRSESPQPKASRSL 634
>AL121917-8|CAI42566.2| 1037|Homo sapiens GNAS complex locus
protein.
Length = 1037
Score = 32.7 bits (71), Expect = 1.3
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -3
Query: 420 HQRLSRKRRPVRNTLRTFILLVIWNKFERIEKRN*KAIRNI 298
H+R R+R+P RN LR F++ F R E KA R++
Sbjct: 594 HRRNRRRRKPQRNLLRNFLVQAFGGCFGRSESPQPKASRSL 634
>AL121917-7|CAI42567.2| 1023|Homo sapiens GNAS complex locus
protein.
Length = 1023
Score = 32.7 bits (71), Expect = 1.3
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -3
Query: 420 HQRLSRKRRPVRNTLRTFILLVIWNKFERIEKRN*KAIRNI 298
H+R R+R+P RN LR F++ F R E KA R++
Sbjct: 594 HRRNRRRRKPQRNLLRNFLVQAFGGCFGRSESPQPKASRSL 634
>AL109840-9|CAI42932.2| 1037|Homo sapiens GNAS complex locus
protein.
Length = 1037
Score = 32.7 bits (71), Expect = 1.3
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -3
Query: 420 HQRLSRKRRPVRNTLRTFILLVIWNKFERIEKRN*KAIRNI 298
H+R R+R+P RN LR F++ F R E KA R++
Sbjct: 594 HRRNRRRRKPQRNLLRNFLVQAFGGCFGRSESPQPKASRSL 634
>AL109840-8|CAI42933.2| 1023|Homo sapiens GNAS complex locus
protein.
Length = 1023
Score = 32.7 bits (71), Expect = 1.3
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -3
Query: 420 HQRLSRKRRPVRNTLRTFILLVIWNKFERIEKRN*KAIRNI 298
H+R R+R+P RN LR F++ F R E KA R++
Sbjct: 594 HRRNRRRRKPQRNLLRNFLVQAFGGCFGRSESPQPKASRSL 634
>AJ251760-2|CAB83215.1| 388|Homo sapiens XLalphas protein protein.
Length = 388
Score = 32.7 bits (71), Expect = 1.3
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -3
Query: 420 HQRLSRKRRPVRNTLRTFILLVIWNKFERIEKRN*KAIRNI 298
H+R R+R+P RN LR F++ F R E KA R++
Sbjct: 293 HRRNRRRRKPQRNLLRNFLVQAFGGCFGRSESPQPKASRSL 333
>AJ224868-1|CAA12165.1| 441|Homo sapiens GNAS1 protein.
Length = 441
Score = 32.7 bits (71), Expect = 1.3
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -3
Query: 420 HQRLSRKRRPVRNTLRTFILLVIWNKFERIEKRN*KAIRNI 298
H+R R+R+P RN LR F++ F R E KA R++
Sbjct: 293 HRRNRRRRKPQRNLLRNFLVQAFGGCFGRSESPQPKASRSL 333
>AJ224867-1|CAA12164.1| 188|Homo sapiens GNSA1 protein.
Length = 188
Score = 32.7 bits (71), Expect = 1.3
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -3
Query: 420 HQRLSRKRRPVRNTLRTFILLVIWNKFERIEKRN*KAIRNI 298
H+R R+R+P RN LR F++ F R E KA R++
Sbjct: 30 HRRNRRRRKPQRNLLRNFLVQAFGGCFGRSESPQPKASRSL 70
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,058,437
Number of Sequences: 237096
Number of extensions: 2462736
Number of successful extensions: 6705
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6705
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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