Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30889
(586 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 79 2e-15
SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23) 70 1e-12
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 68 7e-12
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 7e-12
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 66 2e-11
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 62 2e-10
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 62 3e-10
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 62 3e-10
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 61 6e-10
SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16) 60 1e-09
SB_35182| Best HMM Match : CUB (HMM E-Value=0) 60 2e-09
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 59 2e-09
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 58 4e-09
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 58 4e-09
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 5e-09
SB_26911| Best HMM Match : Trypsin (HMM E-Value=0) 58 7e-09
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 57 9e-09
SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 56 3e-08
SB_28864| Best HMM Match : Trypsin (HMM E-Value=1.4e-40) 55 5e-08
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 52 3e-07
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 52 5e-07
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 48 6e-06
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 47 1e-05
SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30) 47 1e-05
SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0) 46 2e-05
SB_44747| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_2871| Best HMM Match : TSP_C (HMM E-Value=8e-11) 46 2e-05
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 46 2e-05
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 45 5e-05
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 45 5e-05
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 44 7e-05
SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_27293| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45) 41 9e-04
SB_133| Best HMM Match : Sushi (HMM E-Value=5e-40) 40 0.001
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.002
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.002
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.008
SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.018
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.032
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.032
SB_53324| Best HMM Match : Trypsin (HMM E-Value=4.4e-08) 35 0.043
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.043
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.056
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_41386| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.17
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.52
SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.52
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.91
SB_12656| Best HMM Match : CS (HMM E-Value=0.0018) 30 1.6
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 29 3.7
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_24663| Best HMM Match : Exo_endo_phos (HMM E-Value=6.7e-05) 28 6.4
SB_51168| Best HMM Match : Extensin_2 (HMM E-Value=1.3) 28 6.4
SB_18643| Best HMM Match : Ion_trans (HMM E-Value=0) 28 6.4
SB_1703| Best HMM Match : Extensin_2 (HMM E-Value=0.26) 28 6.4
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 79.4 bits (187), Expect = 2e-15
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = +3
Query: 270 LHESFMCAGGQRGR-DPCTGDGGSPLVCPIPNQTNRYWQSGIVSWGIGCGEQGTPGVYVD 446
+++ +CAG + G+ D C GD G P VC P T+R+ G VSWG+GC +G PG+Y D
Sbjct: 608 INDKVICAGYEGGKIDSCKGDSGGPFVCKDPRVTSRFILHGAVSWGVGCARKGQPGIYTD 667
Query: 447 VSKIRAWIDEKVAENGFD 500
+ K WID + +N D
Sbjct: 668 IKKYLNWID-NIVKNCLD 684
>SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23)
Length = 136
Score = 70.1 bits (164), Expect = 1e-12
Identities = 36/94 (38%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Frame = +3
Query: 213 SRTRCASASPQDAAGRLFQLHESFMCAGGQRGR-DPCTGDGGSPLVCPIPNQTNRYWQSG 389
SR RC S+ P ++H+S +CAG +G D C GD G P+VC R++ G
Sbjct: 53 SRARCDSSYPN-------KIHDSMICAGIDKGGIDACQGDSGGPMVC---ENGGRFYIHG 102
Query: 390 IVSWGIGCGEQGTPGVYVDVSKIRAWIDEKVAEN 491
SWG GC G GVY V + WI +++A+N
Sbjct: 103 ATSWGYGCAAPGLYGVYAKVKYLLPWIKDEMAKN 136
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 67.7 bits (158), Expect = 7e-12
Identities = 35/87 (40%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +3
Query: 210 LSRTRCASASPQDAAGRLFQLHESFMCAG-GQRGRDPCTGDGGSPLVCPIPNQTNRYWQS 386
+SR RC A P ++H+S +CAG Q G D C GD G P+VC R++
Sbjct: 851 VSRARCEKAYPG-------KIHDSMLCAGLDQGGIDTCQGDSGGPMVC---ESRGRFYIH 900
Query: 387 GIVSWGIGCGEQGTPGVYVDVSKIRAW 467
G SWG GC + G GVY V + AW
Sbjct: 901 GATSWGYGCAQPGKFGVYAHVKNLVAW 927
Score = 46.8 bits (106), Expect = 1e-05
Identities = 34/94 (36%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
Frame = +3
Query: 210 LSRTRCASASPQDAAGRLFQLHESFMCAGGQRGR-DPCTGDGGSPLVCPIPNQTNRYWQS 386
LS+ C Q AG Q+ +S +CAG C GD G P VC P+ RY
Sbjct: 208 LSQDACKKKVQQ--AGFGIQITDSMVCAGVPGSVVSGCHGDSGGPYVCIQPD--GRYVLQ 263
Query: 387 GIVSWGIG-CGEQGTPGVYVDVSKIRAWIDEKVA 485
G VSWG G C V+ V+ R WID ++
Sbjct: 264 GDVSWGSGRCDSSQMFTVFGRVAHFRNWIDRHMS 297
Score = 35.1 bits (77), Expect = 0.043
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +2
Query: 89 LPPPMDSPAAKTKCLATGWGKDKFGKEGRHRGIMKKIEVPVVENQVCQR 235
LP + +P T+C TGWG+ G G I+++ VPVV C++
Sbjct: 812 LPDAVPAPTDGTRCWITGWGRLASG--GTAPDILQQASVPVVSRARCEK 858
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +2
Query: 122 TKCLATGWGKDKFGKEGRHRGIMKKIEVPVVENQVCQRESARRGW 256
+KC TGWGK + H I+++ +P + C+++ + G+
Sbjct: 180 SKCFITGWGKIRHPGGSHH--ILQQAMMPPLSQDACKKKVQQAGF 222
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 67.7 bits (158), Expect = 7e-12
Identities = 36/83 (43%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = +3
Query: 231 SASPQDAAGRLFQLHESFMCAG-GQRGRDPCTGDGGSPLVCPIPNQTNRYWQ-SGIVSWG 404
S S D ++HES +CAG Q G D C GD G PLVC TN W G+ SWG
Sbjct: 183 SKSRCDTGNYTGKIHESMLCAGLEQGGVDSCQGDSGGPLVC---EDTNGRWHLEGVTSWG 239
Query: 405 IGCGEQGTPGVYVDVSKIRAWID 473
GC GVY V +R WI+
Sbjct: 240 YGCAAPRMYGVYASVRYLRDWIN 262
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 66.1 bits (154), Expect = 2e-11
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Frame = +3
Query: 270 LHESFMCAGGQRG-RDPCTGDGGSPLVCPIPNQTNRYWQSGIVSWGIGCGEQGTPGVYVD 446
+HE+ +CAG +RG +D C D G PL C + RY+ G+VSWG C GVY
Sbjct: 203 IHETALCAGYERGLKDSCEFDSGGPLAC---QKGGRYYAVGLVSWGDECARAHKFGVYSR 259
Query: 447 VSKIRAWIDEKVAENGFDTK 506
++K+ W+ K+AE TK
Sbjct: 260 MAKLTPWMVSKIAEKEMATK 279
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 62.5 bits (145), Expect = 2e-10
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Frame = +3
Query: 210 LSRTRCASASPQDAAGRLFQLHESFMCAGGQRGR-DPCTGDGGSPLVCPIPNQTNRYWQS 386
+S+++C +A P ++H+S +CAG G D C GD G PLVC R+
Sbjct: 446 VSQSKCNTAYPN-------KIHDSMLCAGLDAGGIDACQGDSGGPLVC---EYKGRWHIE 495
Query: 387 GIVSWGIGCGEQGTPGVYVDVSKIRAWIDEKVAEN 491
G SWG GC GVY V ++AW+ + N
Sbjct: 496 GATSWGYGCASPNQYGVYAHVRYLKAWVQGIMGNN 530
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 62.1 bits (144), Expect = 3e-10
Identities = 30/69 (43%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +3
Query: 270 LHESFMCAG-GQRGRDPCTGDGGSPLVCPIPNQTNRYWQSGIVSWGIGCGEQGTPGVYVD 446
+++ + CAG Q GRD C GD G PLVC N +Y G+VSWG GC GVY+D
Sbjct: 159 INDRYFCAGFPQGGRDSCGGDSGGPLVCS--NADGQYVLRGVVSWGEGCARPKKYGVYLD 216
Query: 447 VSKIRAWID 473
V + +I+
Sbjct: 217 VRRTLPFIE 225
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/70 (30%), Positives = 31/70 (44%)
Frame = +2
Query: 44 LSRPLI*LPTWASPXLPPPMDSPAAKTKCLATGWGKDKFGKEGRHRGIMKKIEVPVVENQ 223
L RP + S LP + TKC TGWGK G + ++ ++EV +V +
Sbjct: 90 LKRPAVFHKRVHSVCLPSVTANLTTGTKCFVTGWGKTAEGSP--YSPVLNELEVDIVSKE 147
Query: 224 VCQRESARRG 253
VC + G
Sbjct: 148 VCNANDSYNG 157
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = +2
Query: 44 LSRPLI*LPTWASPXLPPPMDSPAAKTKCLATGWGKDKFGKEGRHRGIMKKIEVPVVENQ 223
L RP + S LP SP C TGWG+ EG + ++++ +V +V
Sbjct: 354 LKRPAVFYKRVHSVCLPEKSWSPPDGAGCYVTGWGRTA-ENEG-YSDVLREAQVRLVSRD 411
Query: 224 VC 229
C
Sbjct: 412 TC 413
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 62.1 bits (144), Expect = 3e-10
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +3
Query: 210 LSRTRCASASPQDAAGRLFQLHESFMCAGGQRGR-DPCTGDGGSPLVCPIPNQTNRYWQS 386
+S+++C +A P ++H+S +CAG G D C GD G PLVC R+
Sbjct: 102 VSQSKCNTAYPN-------KIHDSMLCAGLDAGGIDACQGDSGGPLVC---EYNGRWHIE 151
Query: 387 GIVSWGIGCGEQGTPGVYVDVSKIRAWI 470
G SWG GC GVY V ++AW+
Sbjct: 152 GATSWGYGCASPNQYGVYAHVRYLKAWV 179
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 61.3 bits (142), Expect = 6e-10
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +3
Query: 264 FQLHESFMCAG-GQRGRDPCTGDGGSPLVCPIPNQTNRYWQSGIVSWGIGCGEQGTPGVY 440
+++ CAG G G D C GD G PLVC + + ++ G +SWG+GC G GVY
Sbjct: 274 YKVSSRMRCAGYGAGGIDACQGDSGGPLVC---KEGDVWYLMGAISWGVGCARGGRYGVY 330
Query: 441 VDVSKIRAWIDEKV 482
D+ ++ W+ +
Sbjct: 331 ADMMDLKYWVQSTI 344
>SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16)
Length = 91
Score = 60.5 bits (140), Expect = 1e-09
Identities = 29/59 (49%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +3
Query: 267 QLHESFMCAG-GQRGRDPCTGDGGSPLVCPIPNQTNRYWQSGIVSWGIGCGEQGTPGVY 440
+LHES +CAG G D C GD G P+VC + N G+VSWGIGC G GVY
Sbjct: 34 RLHESMVCAGRASGGIDSCQGDSGGPMVCEYNGKFNL---EGVVSWGIGCARPGKYGVY 89
>SB_35182| Best HMM Match : CUB (HMM E-Value=0)
Length = 963
Score = 59.7 bits (138), Expect = 2e-09
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +3
Query: 210 LSRTRCASASPQDAAGRLFQLHESFMCAG-GQRGRDPCTGDGGSPLVCPIPNQTNRYWQS 386
+SR +C S Q + G ++ E+ +CAG Q G D C GD G P VC P ++
Sbjct: 374 VSRDQC---SHQQSYGD--RITENMLCAGMRQGGVDSCQGDSGGPFVCTNPENPRQWTLV 428
Query: 387 GIVSWGIGCGEQGTPGVYVDVSKIRAWID 473
G+ SWG GC G+Y +V + WI+
Sbjct: 429 GVTSWGKGCARALKYGIYANVRRYLHWIN 457
Score = 30.7 bits (66), Expect = 0.91
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
Frame = +2
Query: 74 WASPXLPPPMDSPAAK-----TKCLATGWGKDKFGKEGRHRGIMKKIEVPVVENQVCQRE 238
W S L P D A TKC +GWG + G G ++ + +VP+V C +
Sbjct: 324 WTSKRLTQPEDGSADDEFKPGTKCTISGWGALQEG-AGSTSKVLMQAKVPLVSRDQCSHQ 382
Query: 239 SA 244
+
Sbjct: 383 QS 384
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +3
Query: 267 QLHESFMCAGGQRGR-DPCTGDGGSPLVCPIPNQTNRYWQSGIVSWGIGCGEQGTPGVYV 443
++ +CAG G D C GD G PLVC NQ ++ +G+ SWG GC G GVY
Sbjct: 794 KISADMICAGNPEGGVDTCQGDSGGPLVCQHGNQ---WFLTGVTSWGHGCAFAGKYGVYA 850
Query: 444 DVSKIRAWI 470
V +++ W+
Sbjct: 851 GVQQLKQWV 859
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 59.3 bits (137), Expect = 2e-09
Identities = 30/94 (31%), Positives = 45/94 (47%)
Frame = +3
Query: 210 LSRTRCASASPQDAAGRLFQLHESFMCAGGQRGRDPCTGDGGSPLVCPIPNQTNRYWQSG 389
LS C +AA + + +CA G D C GD G PLVC N++ G
Sbjct: 368 LSYAECTKNGSYEAAA----VSSTMLCAQVP-GIDTCQGDSGGPLVC---ENNNKWTLVG 419
Query: 390 IVSWGIGCGEQGTPGVYVDVSKIRAWIDEKVAEN 491
+ SWG GC PG+Y +++++ W+ +A N
Sbjct: 420 VTSWGYGCAHPDYPGIYAKLTELKDWVFHHMATN 453
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 58.4 bits (135), Expect = 4e-09
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +3
Query: 270 LHESFMCAGGQRGR-DPCTGDGGSPLVCPIPNQTNRYWQSGIVSWGIGCGEQGTPGVYVD 446
+HE +CAG + G PC D G PL C ++ ++ GIVS+G+GCG GVY +
Sbjct: 207 IHERALCAGPREGGCGPCQFDSGGPLAC---SEGGLWYMYGIVSYGVGCGVANKFGVYSN 263
Query: 447 VSKIRAWIDEKVAENGFDTKANQPK 521
+ ++ W+ + ++ + + NQ K
Sbjct: 264 MYELTDWVRDTISRHEPNLAQNQNK 288
Score = 32.3 bits (70), Expect = 0.30
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 98 PMDSPA-AKTKCLATGWGKDKFGKEGRHRGIMKKIEVPVVENQVCQRESARRG 253
P D+P K C GWG+ FG G +++++V +V ++C ++ G
Sbjct: 155 PRDTPRDLKRDCYVAGWGRRSFG--GEQSLALREVQVHMVPRELCNSANSYGG 205
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 58.4 bits (135), Expect = 4e-09
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +3
Query: 270 LHESFMCAG-GQRGRDPCTGDGGSPLVCPIPNQTNRYWQSGIVSWGIGCGEQGTPGVYVD 446
+HE FMCAG Q G+D C GD G PL C ++ + +G++SWG C GVY D
Sbjct: 156 IHEQFMCAGYNQGGQDGCLGDSGGPLSCQ--TESGDWVLTGLMSWGEKCALPDKYGVYTD 213
Query: 447 VSKIRAWID 473
V ++ +I+
Sbjct: 214 VRRMLPFIE 222
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/70 (30%), Positives = 31/70 (44%)
Frame = +2
Query: 44 LSRPLI*LPTWASPXLPPPMDSPAAKTKCLATGWGKDKFGKEGRHRGIMKKIEVPVVENQ 223
L RP + S LP + TKC TGWGK G + ++ ++EV +V +
Sbjct: 467 LKRPAVFHKRVHSVCLPSVTANLTTGTKCFVTGWGKTAEGSP--YSPVLNELEVDIVSKE 524
Query: 224 VCQRESARRG 253
VC + G
Sbjct: 525 VCNANDSYNG 534
Score = 37.9 bits (84), Expect = 0.006
Identities = 21/70 (30%), Positives = 31/70 (44%)
Frame = +2
Query: 44 LSRPLI*LPTWASPXLPPPMDSPAAKTKCLATGWGKDKFGKEGRHRGIMKKIEVPVVENQ 223
L RP + S LP + TKC TGWGK G + ++ ++EV +V +
Sbjct: 350 LKRPAVFHKCVYSVCLPSVTANLTTGTKCYVTGWGKTAEGSP--YSLVLNEVEVDIVSKE 407
Query: 224 VCQRESARRG 253
VC + G
Sbjct: 408 VCNANDSYNG 417
Score = 31.1 bits (67), Expect = 0.69
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 110 PAAKTKCLATGWGKDKFGKEGRHRGIMKKIEVPVVENQVCQRESARRG 253
PA K C TGWG+ G +K+++VP+V VC ++ G
Sbjct: 109 PAGKM-CYLTGWGETVLDS-GVFSPTLKQLKVPLVNKSVCNSNNSYSG 154
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = +2
Query: 44 LSRPLI*LPTWASPXLPPPMDSPAAKTKCLATGWGKDKFGKEGRHRGIMKKIEVPVVENQ 223
L RP + S LP SP C TGWG+ EG + ++++ +V +V
Sbjct: 639 LKRPAVFYKRVHSVCLPEKSWSPPDGAGCYVTGWGRTA-ENEG-YSDVLREAQVRLVSRD 696
Query: 224 VC 229
C
Sbjct: 697 TC 698
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 58.0 bits (134), Expect = 5e-09
Identities = 24/59 (40%), Positives = 33/59 (55%)
Frame = +3
Query: 306 GRDPCTGDGGSPLVCPIPNQTNRYWQSGIVSWGIGCGEQGTPGVYVDVSKIRAWIDEKV 482
G D C GD G P+VC R++ G+VSWG GC +G GVY V ++ WI+ +
Sbjct: 273 GIDSCQGDSGGPMVC---ENNGRFYLDGVVSWGHGCAGRGKFGVYAKVRYVKEWIESYI 328
>SB_26911| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 349
Score = 57.6 bits (133), Expect = 7e-09
Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Frame = +3
Query: 210 LSRTRCASASPQDAAGRLFQLHESFMCAGGQRGR-DPCTGDGGSPLVCPIPNQTNRYWQS 386
+SR+RC A P ++ S +CAG +G D C D G PLV R++
Sbjct: 265 VSRSRCDKAYPG-------KIDSSMLCAGLDKGGIDACQRDSGGPLVS---KTGERFYIH 314
Query: 387 GIVSWGIGCGEQGTPGVYVDVSKIRAWIDEKVAEN 491
G SWG GC G GVY V + W+ +A+N
Sbjct: 315 GATSWGYGCARSGKFGVYAHVKNLIGWVTSGMAKN 349
Score = 27.5 bits (58), Expect = 8.5
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +2
Query: 98 PMDSPAAK--TKCLATGWGKDKFGKEGRHRGIMKKIEVPVVENQVCQR 235
P + PA T C TGWG G G ++++ VP+V C +
Sbjct: 227 PFNGPAPSDCTHCWITGWGHLASG--GDTPDLLQQASVPIVSRSRCDK 272
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 57.2 bits (132), Expect = 9e-09
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Frame = +3
Query: 264 FQLHESFMCAG--GQRGRDPCTGDGGSPLVCPIPNQTNRYWQSGIVSWG-IGCGEQGTPG 434
+++ E+ +CAG G+ G++ C GD G P VC N ++ G+VSWG C
Sbjct: 204 WRVTETMLCAGDAGKTGKNGCNGDSGGPFVC--RNTAGQWVLQGVVSWGDPECSSANHFS 261
Query: 435 VYVDVSKIRAWIDEKVAEN 491
V+ VS +R WID+ +A N
Sbjct: 262 VFARVSVLRHWIDKVIARN 280
>SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 56.8 bits (131), Expect = 1e-08
Identities = 28/67 (41%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +3
Query: 288 CAG-GQRGRDPCTGDGGSPLVCPIPNQTNRYWQS-GIVSWGIGCGEQGTPGVYVDVSKIR 461
CAG G+ G D C GD G V + + W S GIVSWG GCG +G G Y V
Sbjct: 218 CAGEGKGGNDTCRGDSGGSFVREVRREGKYRWVSAGIVSWGEGCGIKGKYGFYTRVESYL 277
Query: 462 AWIDEKV 482
+WI+ +
Sbjct: 278 SWINSTI 284
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 55.6 bits (128), Expect = 3e-08
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +3
Query: 270 LHESFMCAG-GQRGRDPCTGDGGSPLVCPIPNQTNRYWQSGIVSWGIGCGEQGTPGVYVD 446
+H +CAG Q G D C D G PL C I + R++ +G+VSWG C GVY +
Sbjct: 215 IHVRALCAGFDQGGVDACQFDSGGPLSCSIGS---RFYLTGVVSWGHECARPKKYGVYAN 271
Query: 447 VSKIRAWIDEKVA 485
+ ++ +W+ + +A
Sbjct: 272 MMRMTSWVRDTIA 284
>SB_28864| Best HMM Match : Trypsin (HMM E-Value=1.4e-40)
Length = 230
Score = 54.8 bits (126), Expect = 5e-08
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +3
Query: 285 MCAGGQRGR-DPCTGDGGSPLVCPIPNQTNRYWQSGIVSWGIGCGEQGTPGVYVDVSKIR 461
+CAG +RG D C D G PL C + R++ +G+VS+G CG G+Y D++ +
Sbjct: 159 LCAGFERGGVDACQYDSGGPLAC---EERGRWYLTGVVSYGHECGNPHKYGLYADMATLN 215
Query: 462 AWIDEKVAEN 491
W++ + E+
Sbjct: 216 TWVENIIQEH 225
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 52.0 bits (119), Expect = 3e-07
Identities = 32/103 (31%), Positives = 40/103 (38%), Gaps = 5/103 (4%)
Frame = +3
Query: 201 RCRLSRTRCASASPQDAAGRL----FQLHESFMCAGGQRGRDPCTGDGGSPLVCPIPNQT 368
R ++ R P D R F +F G+ G D C GD G V +
Sbjct: 244 RAKVLRHSAFEIQPNDVCDRSTRHNFNATVTFCAGDGKGGNDTCHGDSGGSFVREFRREG 303
Query: 369 NRYWQS-GIVSWGIGCGEQGTPGVYVDVSKIRAWIDEKVAENG 494
W S GIVSWG GCG++ G Y V WI + G
Sbjct: 304 KYRWVSAGIVSWGEGCGQKDKYGFYTRVEPYVHWIIKTAIPKG 346
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 51.6 bits (118), Expect = 5e-07
Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Frame = +3
Query: 288 CAGGQRG-RDPCTGDGGSPLVCPIPNQTNRYWQS-GIVSWGIGCGEQGTPGVYVDV 449
CAG G RD C GD GSP+V +T+ W + G+ SWG GC ++G GVY D+
Sbjct: 902 CAGDVMGERDACKGDSGSPIVV---KRTDGSWSAVGLSSWGEGCAQKGKFGVYADL 954
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 48.0 bits (109), Expect = 6e-06
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Frame = +3
Query: 264 FQLHESFMCAG-GQRGRDPCTGDGGSPLVCPIPNQTNRYWQSGIVSWG--IGCGEQGTPG 434
+ + + CAG G+D C GD G V + +++ G+VSWG +GCG G
Sbjct: 285 YSVTPNMFCAGQASGGKDICQGDSGGGFVL-YDSAKQKWFLGGVVSWGSSLGCGLPNKYG 343
Query: 435 VYVDVSKIRAWI 470
VYV V++ WI
Sbjct: 344 VYVRVTQFLGWI 355
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 48.0 bits (109), Expect = 6e-06
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 318 CTGDGGSPLVCPIPNQTNRYWQSGIVSWGI-GCGEQGTPGVYVDVSKIRAWIDEKVA 485
C GD G PLVC R+ G+ SW GC + G GVY DV + WI + V+
Sbjct: 1970 CKGDSGGPLVC---ESKGRWVLMGVTSWSYNGCADSGYAGVYADVVYFKDWIRQTVS 2023
Score = 31.5 bits (68), Expect = 0.52
Identities = 11/47 (23%), Positives = 25/47 (53%)
Frame = +2
Query: 98 PMDSPAAKTKCLATGWGKDKFGKEGRHRGIMKKIEVPVVENQVCQRE 238
P + A T C +GWG + G+ ++++ +P+V+ + C+ +
Sbjct: 1902 PQAALLAGTPCYVSGWG--RIGESSPGSNVLQEASIPLVDQRACEEQ 1946
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 46.8 bits (106), Expect = 1e-05
Identities = 28/69 (40%), Positives = 34/69 (49%)
Frame = +3
Query: 279 SFMCAGGQRGRDPCTGDGGSPLVCPIPNQTNRYWQSGIVSWGIGCGEQGTPGVYVDVSKI 458
S +CAGG GR C GD G PLVC N+ R+ GIVSWG V+ V
Sbjct: 574 SMVCAGGP-GRGGCQGDSGGPLVC---NEAGRWVLRGIVSWGSRECSTEFYTVFTRVINY 629
Query: 459 RAWIDEKVA 485
WI+ +A
Sbjct: 630 MPWIETILA 638
>SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30)
Length = 249
Score = 46.8 bits (106), Expect = 1e-05
Identities = 28/69 (40%), Positives = 34/69 (49%)
Frame = +3
Query: 279 SFMCAGGQRGRDPCTGDGGSPLVCPIPNQTNRYWQSGIVSWGIGCGEQGTPGVYVDVSKI 458
S +CAGG GR C GD G PLVC N+ R+ GIVSWG V+ V
Sbjct: 114 SMVCAGGP-GRGGCQGDSGGPLVC---NEAGRWVLRGIVSWGSRECSTEFYTVFTRVINY 169
Query: 459 RAWIDEKVA 485
WI+ +A
Sbjct: 170 MPWIETILA 178
>SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 921
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Frame = +3
Query: 285 MCAGGQRGRDPCTGDGGSPLVCPIPNQTN----RYWQSGIVSWGI-----GCGEQGTPGV 437
+CAG C D GSPL+ P+P+ N R+ GI+SWG+ GC +
Sbjct: 841 LCAGFLTSDVTCISDSGSPLMFPVPHAQNPNVKRWILGGILSWGLNTLTPGCHSDYSHSA 900
Query: 438 YVDVSKIRAWI 470
YVD+ WI
Sbjct: 901 YVDIGSYLKWI 911
>SB_44747| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 46.4 bits (105), Expect = 2e-05
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +3
Query: 252 AGRLFQLHESFMCAGGQRGRDPCTGDGGSPLVCPIPNQTNRYWQSGIVSWGIGCGEQGTP 431
AG Q++ + +C+ G C+ DGGSPLV N +N G+ SWG C
Sbjct: 206 AGYKGQVYANMICSDGLA----CSVDGGSPLVA---NDSNMLMLLGVFSWGRSCALDMKQ 258
Query: 432 GVYVDVSK-IRAWIDEKVAENGFDTKANQPK 521
VY ++ I AW+++ +A G T A + +
Sbjct: 259 AVYTSITHGILAWLNKLIAIKGQGTCAKRSR 289
>SB_2871| Best HMM Match : TSP_C (HMM E-Value=8e-11)
Length = 326
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +3
Query: 285 MCAGGQRG-RDPCTGDGGSPLVCPIPNQTNRYWQSGIVSWGIG-CGEQGTPGVYVDVSKI 458
+CAG + C GD G P VC P+ RY G VSWG G C + V+ V+
Sbjct: 2 LCAGVENSILSSCHGDSGGPYVCVQPD--GRYVLQGDVSWGSGKCDAKQMFTVFGRVAHF 59
Query: 459 RAWIDEKVAENGFD 500
R WID +A+ ++
Sbjct: 60 RNWIDHHMADQVYE 73
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +3
Query: 288 CAGGQR-GRDPCTGDGGSPLVCPIPNQTNRYWQSGIVSWGIGCGEQGTPGVYVDVSKIRA 464
CAG + + C+GD G PLVC + R++ G+ SWG C Q P V+ DV
Sbjct: 469 CAGTEGVAKAVCSGDSGGPLVC---ERGGRWFLMGLSSWGWVC-PQARPKVFSDVLAAMD 524
Query: 465 WIDEKVAENG 494
WI EK G
Sbjct: 525 WIREKTRYYG 534
Score = 31.5 bits (68), Expect = 0.52
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +2
Query: 44 LSRPLI*LPTWASPXLPPPMDSPAAKTKCLATGWGKDKFGKEGRHRGIMKKIEVPVVENQ 223
L+RPL + P P D PA T C TGWG + + ++++ +P+V +
Sbjct: 394 LTRPLN-FTQYVQPVCLPDSDFPAG-TLCYVTGWGSTNY-RGSPSPNYLQEVGLPLVNHS 450
Query: 224 VC 229
C
Sbjct: 451 QC 452
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +3
Query: 288 CAGGQR-GRDPCTGDGGSPLVCPIPNQTNRYWQSGIVSWGIGCGEQGTPGVYVDVSKIRA 464
CAG + + C+GD G PLVC + R++ G+ SWG C Q P V+ DV
Sbjct: 718 CAGTEGVAKAVCSGDSGGPLVC---ERGGRWFLMGLSSWGWVC-PQARPKVFSDVLAAMD 773
Query: 465 WIDEKVAENG 494
WI EK G
Sbjct: 774 WIREKTRYYG 783
Score = 31.5 bits (68), Expect = 0.52
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +2
Query: 44 LSRPLI*LPTWASPXLPPPMDSPAAKTKCLATGWGKDKFGKEGRHRGIMKKIEVPVVENQ 223
L+RPL + P P D PA T C TGWG + + ++++ +P+V +
Sbjct: 643 LTRPLN-FTQYVQPVCLPDSDFPAG-TLCYVTGWGSTNY-RGSPSPNYLQEVGLPLVNHS 699
Query: 224 VC 229
C
Sbjct: 700 QC 701
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 44.8 bits (101), Expect = 5e-05
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
Frame = +3
Query: 279 SFMCAGGQRGR--DPCTGDGGSPLVC--PIP---NQTNRYWQSGIVSWGIGCGEQGTPGV 437
+ CAG + D C GD G P P+P +R+ G++SWG GCG+ G GV
Sbjct: 291 NMFCAGFENSSRGDACQGDSGGPFSVDNPLPATPKGQHRHVLLGVISWGDGCGKFGKYGV 350
Query: 438 YVDVSKIRAWI 470
Y + WI
Sbjct: 351 YTRLFNFIDWI 361
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/42 (47%), Positives = 24/42 (57%)
Frame = +3
Query: 279 SFMCAGGQRGRDPCTGDGGSPLVCPIPNQTNRYWQSGIVSWG 404
S +CAGGQR C GD G P VC N+ ++ G VSWG
Sbjct: 135 SMICAGGQRAAGGCQGDSGGPFVC---NEGGKWVLRGAVSWG 173
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 44.4 bits (100), Expect = 7e-05
Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 276 ESFMCAGGQRGRDPCTGDGGSPLVCPIPNQTNRYWQSGIVSWGIG-CGEQGTPGVYVDVS 452
+S +CAGG G C GD G P VC N+ R+ G VSWG CG V+ VS
Sbjct: 241 KSMICAGGM-GMGGCQGDSGGPFVC---NEGGRWVLRGAVSWGQPMCGTDHYT-VFARVS 295
Query: 453 KIRAWIDEKVAENGFDTKANQ 515
WI++ + +G TK Q
Sbjct: 296 SFIDWINDMM--SGGITKQQQ 314
>SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +3
Query: 276 ESFMCAGGQRGRDPCTGDGGSPLVCPIPNQTNRYWQSGIVSW-GIGCGEQGTPGVYVDVS 452
E+ MC GG G C GD G PLVC + ++ G+ SW VY VS
Sbjct: 107 ETMMCVGGA-GSSACNGDSGGPLVC---EEGGKWVLRGVASWVATSQCPVNNYSVYARVS 162
Query: 453 KIRAWIDEKVA 485
WI +K+A
Sbjct: 163 SDVDWIQDKIA 173
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +2
Query: 44 LSRPLI*LPTWASPXLPPPMDSPAAKTKCLATGWGKDKFGKEGRHRGIMKKIEVPVVENQ 223
L+RPL ++ LP D KC TGWG+ + + + + VP+V++
Sbjct: 35 LARPLAVDKKVSTACLPQQGDRANPGLKCYITGWGRYHSTITNPAKSLRQSL-VPLVDHV 93
Query: 224 VCQR 235
C+R
Sbjct: 94 TCKR 97
>SB_27293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 372
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Frame = +3
Query: 276 ESFMCAGGQRGRDP---CTGDGGSPLVCPIPNQTNRYWQSGIVSWGIG-CGEQGTPGVYV 443
+S +CAG + C GD G PL+C ++ +++ G+ SWG C + V+
Sbjct: 286 KSMLCAGYNDNKTQTSGCIGDSGGPLMCKAGDRWSKWVLHGVTSWGDSTCDGRAAYSVFT 345
Query: 444 DVSKIRAWIDEKVA 485
VS WI +A
Sbjct: 346 KVSNFVQWIYRTMA 359
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +2
Query: 122 TKCLATGWGKDKFGKEGRHRGIMKKIEVPVVENQVCQRESARR---GWE 259
TKC TGWGK G + + + + +PVV C ++ + GW+
Sbjct: 239 TKCYMTGWGKRNHGDADMSKKLQEAV-MPVVAFTECDLRNSHKQNVGWK 286
>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
Length = 234
Score = 40.7 bits (91), Expect = 9e-04
Identities = 25/67 (37%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +3
Query: 285 MCAGGQR--GRDPCTGDGGSPLVCPIPNQTNRYWQSGIVSWGIGCGEQGTPGVYVDVSKI 458
+CAG + C GD G PLVC Q Y G+VS+G G E + VY VS
Sbjct: 114 LCAGEAKPNAAGACQGDSGGPLVCERNGQWTLY---GVVSFGAGNCEVTSYTVYTKVSNY 170
Query: 459 RAWIDEK 479
WI ++
Sbjct: 171 LDWITKR 177
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +2
Query: 89 LPPPMDSPAAKTKCLATGWGKDKFGKEGRHRGIMKKIEVPVVENQVCQRE 238
LP P D P +KC TGWG+ + G I+++ +P+ ++ C+R+
Sbjct: 55 LPSPGDVPPVGSKCWLTGWGR-QVDSSGPLPDILQQARIPIASHEDCKRK 103
>SB_133| Best HMM Match : Sushi (HMM E-Value=5e-40)
Length = 607
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 288 CAGGQRGR-DPCTGDGGSPLVCPIPNQTNRYWQSGIVSWGIGCGEQGTPGVYVDVSK 455
CAG +R PC GD GSP+V P +T R+ G+ W GC + Y VSK
Sbjct: 327 CAGFRRKPLAPCFGDVGSPMVIQSP-RTGRWVIVGLFGWSEGCAQPRKYAYYTRVSK 382
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/66 (39%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +3
Query: 279 SFMCAGGQRGRDPCTGDGGSPLVCPIPNQTNRYWQSGIVSWGIGCGEQG-TPGVYVDVSK 455
S +CAGG G C GD G PL C + N+ R+ G+ SW G T VY VS
Sbjct: 457 SMICAGGA-GSSACNGDSGGPLQC-LENE--RWVLRGVASWVTAETCPGNTFSVYARVSS 512
Query: 456 IRAWID 473
WI+
Sbjct: 513 YSNWIE 518
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +3
Query: 279 SFMCAGGQRGRDPCTGDGGSPLVCPIPNQTNRYWQSGIVSWGIGCGEQGTPG-VYVDVSK 455
+ +CAGG G C+GD G PLVC ++ + G VSWG PG ++V ++
Sbjct: 482 TMICAGGS-GSSACSGDSGGPLVC---HEGGTWVLRGAVSWGT---SHSCPGRMFVAYAR 534
Query: 456 IRAWID 473
I + ID
Sbjct: 535 ISSHID 540
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +2
Query: 89 LPPPMDSPAAKTKCLATGWGKDKFGKEGRHRGIMKKIEVPVVENQVCQR 235
LP D + T C TGWG ++G G ++++ +PVV ++ C+R
Sbjct: 399 LPGLYDQVTSGTMCYVTGWGMTEYGNAGAR--LLQQARIPVVSSEECER 445
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 37.5 bits (83), Expect = 0.008
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +3
Query: 279 SFMCAG--GQRGRDPCTGDGGSPLVCPIPNQTNRYWQSGIVSWGIGCGEQGTPGVYVDVS 452
S +C G + C GD G PLVC + R+ G S+G C + VY V+
Sbjct: 489 SHICVGFNTENAASSCQGDSGGPLVC---EEEGRWVLHGATSFGKSCSPKHY-SVYTRVN 544
Query: 453 KIRAWIDEKVAE 488
WI +++ E
Sbjct: 545 SYMKWIFDRIGE 556
Score = 32.7 bits (71), Expect = 0.23
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +3
Query: 234 ASPQDAAGRLFQLHES-FMCAGGQRG--RDPCTGDGGSPLVCPIPNQTNRYWQSGIVSWG 404
AS D + + + + +CAG R C GD G PLVC R++ G VS+G
Sbjct: 231 ASHNDCKNKYYGVSSTAHLCAGEARSGASGGCNGDSGGPLVC---EDNGRWYLHGAVSYG 287
>SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 36.3 bits (80), Expect = 0.018
Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +3
Query: 270 LHESFMCAGGQRGRDPCTGDGGSPLVCPIPNQTNRYW-QSGIVSWGIGCGEQGTPGVYVD 446
L +S +CAGG G C GD G PL C + N +W G+ SW PG Y
Sbjct: 129 LDKSMVCAGGA-GSSICHGDSGGPLQC----EENGHWVLRGVASW---VARMHCPGEYYS 180
Query: 447 V 449
V
Sbjct: 181 V 181
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 35.5 bits (78), Expect = 0.032
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 243 QDAAGRLFQLHE-SFMCAGGQRGRDPCTGDGGSPLVC 350
Q GRL + S +CAGGQ G+ C GD G P VC
Sbjct: 187 QRTNGRLVPVDSRSMICAGGQ-GKGGCQGDSGGPFVC 222
Score = 34.7 bits (76), Expect = 0.056
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +2
Query: 89 LPPPMDSPAAKTKCLATGWGKDKFGKEGRHRGIMKKIEVPVVENQVCQRESAR 247
LP A +C TGWG+ G G GI+++ +PV + CQR + R
Sbjct: 142 LPSSGSRAQAGARCYITGWGRTVGG--GSAAGILQQAMLPVAGDSDCQRTNGR 192
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 35.5 bits (78), Expect = 0.032
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +3
Query: 318 CTGDGGSPLVCPIPNQTNRYWQ-SGIVSWGI-GCGE-QGTPGVYVDVSKIRAWI 470
C GD G P VC +N+ W G+VSWG C Q VY V++ WI
Sbjct: 1515 CFGDSGGPFVC---QGSNKRWNIQGVVSWGTRTCSSGQNEYTVYARVAQFVPWI 1565
>SB_53324| Best HMM Match : Trypsin (HMM E-Value=4.4e-08)
Length = 182
Score = 35.1 bits (77), Expect = 0.043
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = +3
Query: 267 QLHESFMCAGGQRG-RDPCTGDGGSPLVCPIPNQTNRYWQSGIVSWGIGCGEQGTPG-VY 440
++H S +C R PC D G PL C +++ G+VS G C ++
Sbjct: 106 KMHPSMLCGYEARNDTGPCVKDRGGPLSC---ESQGKWYLKGLVSTGTDCYSNMPKNLIF 162
Query: 441 VDVSKIRAWIDEKVAENGFD 500
+S + W+ ++V N D
Sbjct: 163 TKISFLMGWV-KQVINNDHD 181
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 35.1 bits (77), Expect = 0.043
Identities = 24/67 (35%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +3
Query: 288 CAGGQR--GRDPCTGDGGSPLVCPIPNQTNRYWQSGIVSWGIGCGEQGTPGVYVDVSKIR 461
CAG R C GD G PLVC Q+ + G VS+G V+ VS
Sbjct: 662 CAGEARVGAAGGCNGDSGGPLVC---EQSGVWVLHGAVSYGARWCPTDYYTVFTRVSSYV 718
Query: 462 AWIDEKV 482
AWI+ K+
Sbjct: 719 AWINGKI 725
Score = 30.7 bits (66), Expect = 0.91
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Frame = +3
Query: 285 MCAGGQRG--RDPCTGDGGSPLVCPIPNQTNRYWQSGIVSWGIGCGEQGTPGVYVDVSKI 458
+CAG R C GD G PLVC ++ G VS+G+ V+ V+
Sbjct: 934 LCAGEARSDAAGGCNGDSGGPLVC---EDNGSWFLHGAVSYGMKYCPTTHYTVFARVASY 990
Query: 459 RAWI 470
WI
Sbjct: 991 TDWI 994
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 34.7 bits (76), Expect = 0.056
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 246 DAAGRLFQLHESFMCAGGQRGR-DPCTGDGGSPLVC 350
D A ++ +CAG G D C GDGGSPL+C
Sbjct: 1393 DCAAAQSRVTAQMLCAGPAAGESDNCFGDGGSPLMC 1428
>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +3
Query: 267 QLHESFMCAG-GQRGRDPCTGDGGSPL 344
Q+HES +CAG G D C GD G P+
Sbjct: 488 QIHESMLCAGLDAGGVDACQGDSGGPM 514
>SB_41386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 33.1 bits (72), Expect = 0.17
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = -3
Query: 263 QPPSRVLRTRAGTPGSRQPAPRSFS*CPGVSLPSRTCPCPSR 138
+PPSR+L RA TPG R P F+ C P R P P R
Sbjct: 146 RPPSRLLTKRAWTPGRRTP----FA-CRRAPTPGRRTPTPGR 182
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 128 CLATGWGKDKFGKEGRHRGIMKKIEVPVVENQVCQRE 238
C ATGWG G ++K+ +PVV Q CQ +
Sbjct: 479 CYATGWGLTVGGDWKSQSDVLKQTPLPVVNRQECQTD 515
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 31.5 bits (68), Expect = 0.52
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 98 PMDSPAAK-TKCLATGWGKDKFGKEGRHRGIMKKIEVPVVENQVCQR 235
P SP T+C +GWG+ G G ++ + +VP+V Q C +
Sbjct: 362 PRSSPLPDGTRCWISGWGRLSSG--GASPNVLMQAQVPLVSGQTCSQ 406
>SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 31.5 bits (68), Expect = 0.52
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = -1
Query: 466 HARILLTSTYTPGVPCSPQPMPQDTIPDC-QYRFV*FGMGHTS--GDPPSPVQGSRPRCP 296
H + +++ P P P P P +P C Q + V H S G PP+P+ P
Sbjct: 125 HEQHVVSHVMHPAPPPPPPPPPAPCMPPCHQTQVVHSVQLHASPPGPPPAPMPAPPPMVV 184
Query: 295 PAH 287
P+H
Sbjct: 185 PSH 187
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 30.7 bits (66), Expect = 0.91
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Frame = +3
Query: 285 MCAGGQRG--RDPCTGDGGSPLVCPIPNQTNRYWQSGIVSWGIGCGEQGTPGVYVDVSKI 458
+CAG R C GD G PLVC ++ G VS+G+ V+ V+
Sbjct: 604 LCAGEARSDAAGGCNGDSGGPLVC---EDNGSWFLHGAVSYGLRNCPTTHYTVFARVASY 660
Query: 459 RAWI 470
WI
Sbjct: 661 TDWI 664
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +3
Query: 318 CTGDGGSPLVCPIPNQTNRYWQSGIVSWGIGCGEQGTPGVYVDVSKIRAWI 470
C GD G PLVC ++ G VS+G+ V+ V+ WI
Sbjct: 283 CNGDSGGPLVC---EDNGSWFLHGAVSYGLRNCPTTHYTVFARVASYTDWI 330
>SB_12656| Best HMM Match : CS (HMM E-Value=0.0018)
Length = 277
Score = 29.9 bits (64), Expect = 1.6
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = -1
Query: 496 NPFSATFSSIHARILLTSTYT-PGVPCSPQPMPQDTIPDCQYRFV*FGMGHTSGDPPSPV 320
+PF S + A + S Y P P P P+P +IP +Y F + H S P + +
Sbjct: 153 SPFPLHPSPLPATSIPPSRYIHPPFPLHPSPLPATSIPPSRYIHPPFPL-HPSPLPATSI 211
Query: 319 QGSRPRCPP 293
SR PP
Sbjct: 212 PPSRYIHPP 220
Score = 28.3 bits (60), Expect = 4.9
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = -1
Query: 505 FVSNPFSATFSSIHARILLTSTYT-PGVPCSPQPMPQDTIPDCQYRFV*FGMGHTSGDP- 332
++ PF S + A + S Y P P P P+P +IP +Y + F + H S P
Sbjct: 99 YIHLPFPLHPSPLPATSIPPSRYIHPPSPLHPSPLPATSIPPSRYIHLPFPI-HPSPFPL 157
Query: 331 -PSPV 320
PSP+
Sbjct: 158 HPSPL 162
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/67 (23%), Positives = 29/67 (43%)
Frame = +2
Query: 44 LSRPLI*LPTWASPXLPPPMDSPAAKTKCLATGWGKDKFGKEGRHRGIMKKIEVPVVENQ 223
LSRP + + LP T C TGWGK ++ +++ ++P+V +
Sbjct: 144 LSRPAVINEFVRTVCLPAQGSRALEGTMCFITGWGKTNITED--KSVTLREAQLPIVGQK 201
Query: 224 VCQRESA 244
C ++
Sbjct: 202 ECNNSNS 208
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +3
Query: 258 RLFQLHESFMCAG--GQRGRDPCTGDGGSPLVC 350
R +++ +S +CAG G C GD G P VC
Sbjct: 218 RTWEVTDSMVCAGDAGITKTSGCYGDSGGPFVC 250
>SB_24663| Best HMM Match : Exo_endo_phos (HMM E-Value=6.7e-05)
Length = 666
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = -1
Query: 559 IYLLKTKRYVIQILGWLAFVSNPFSATFSSIHARILLTSTYTP 431
+ L+ K+YV +L W A F S H ++ + Y P
Sbjct: 61 VALIVAKKYVNTLLEWEPISDRLLRARFDSKHCKLTIIQCYAP 103
>SB_51168| Best HMM Match : Extensin_2 (HMM E-Value=1.3)
Length = 288
Score = 27.9 bits (59), Expect = 6.4
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 65 LPTWASPXLPPPMDSPAAKT 124
+PTW +P PP+DS A++
Sbjct: 62 IPTWTAPQQDPPVDSARARS 81
>SB_18643| Best HMM Match : Ion_trans (HMM E-Value=0)
Length = 1885
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -1
Query: 457 ILLTSTYTPGVPCSPQPMPQDT 392
I+L T TP C P PQDT
Sbjct: 1419 IMLACTDTPNAKCDPNAYPQDT 1440
>SB_1703| Best HMM Match : Extensin_2 (HMM E-Value=0.26)
Length = 307
Score = 27.9 bits (59), Expect = 6.4
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 65 LPTWASPXLPPPMDSPAAKT 124
+PTW +P PP+DS A++
Sbjct: 62 IPTWTAPQQDPPVDSARARS 81
Score = 27.9 bits (59), Expect = 6.4
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 65 LPTWASPXLPPPMDSPAAKT 124
+PTW +P PP+DS A++
Sbjct: 165 IPTWTAPQQDPPVDSARARS 184
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,850,182
Number of Sequences: 59808
Number of extensions: 452141
Number of successful extensions: 1612
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 1364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1570
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1410146228
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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