Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30888
(479 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 25 0.42
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 25 0.42
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 24 0.97
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 24 0.97
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 22 3.0
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 22 3.0
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 22 3.0
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 3.9
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 22 3.9
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 22 3.9
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 21 5.2
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 21 5.2
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 21 6.9
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 21 6.9
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 21 9.1
AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor p... 21 9.1
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 21 9.1
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 21 9.1
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 25.0 bits (52), Expect = 0.42
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 131 DSYNSARRPVCEICWQFVYILPVLYLH 211
D Y+ PVC +C+ +Y ++YLH
Sbjct: 405 DKYSRIVFPVCFVCFNLMYW--IIYLH 429
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 25.0 bits (52), Expect = 0.42
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 131 DSYNSARRPVCEICWQFVYILPVLYLH 211
D Y+ PVC +C+ +Y ++YLH
Sbjct: 405 DKYSRIVFPVCFVCFNLMYW--IIYLH 429
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 23.8 bits (49), Expect = 0.97
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 299 YGPYANVGPFTEKELSIHYKNNS-PFLTVTRVE 394
Y P+ GP TEK ++ +NS PF+ T +E
Sbjct: 293 YNPFTPFGPVTEK---VNNDSNSLPFIDRTPIE 322
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 23.8 bits (49), Expect = 0.97
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 299 YGPYANVGPFTEKELSIHYKNNS-PFLTVTRVE 394
Y P+ GP TEK ++ +NS PF+ T +E
Sbjct: 293 YNPFTPFGPVTEK---VNNDSNSLPFIDRTPIE 322
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.2 bits (45), Expect = 3.0
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +2
Query: 128 SDSYNSARRPVCEICWQFVYILPVLYLHTKNQCNSKYKD 244
S S N RP + + I + L K C+S YKD
Sbjct: 464 SGSTNFNERPAVAVVSKSSSINKLEDLRNKKSCHSGYKD 502
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.2 bits (45), Expect = 3.0
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +2
Query: 128 SDSYNSARRPVCEICWQFVYILPVLYLHTKNQCNSKYKD 244
S S N RP + + I + L K C+S YKD
Sbjct: 464 SGSTNFNERPAVAVVSKSSSINKLEDLRNKKSCHSGYKD 502
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.2 bits (45), Expect = 3.0
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +2
Query: 128 SDSYNSARRPVCEICWQFVYILPVLYLHTKNQCNSKYKD 244
S S N RP + + I + L K C+S YKD
Sbjct: 464 SGSTNFNERPAVAVVSKSSSINKLEDLRNKKSCHSGYKD 502
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.8 bits (44), Expect = 3.9
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 419 GNIAIEEVIEIEHTGAKLKG 478
GNI + +VIE+ T K G
Sbjct: 10 GNIHMSDVIEVIETDTKYNG 29
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.8 bits (44), Expect = 3.9
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 419 GNIAIEEVIEIEHTGAKLKG 478
GNI + +VIE+ T K G
Sbjct: 10 GNIHMSDVIEVIETDTKYNG 29
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.8 bits (44), Expect = 3.9
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +2
Query: 131 DSYNSARRPVCEICWQFVY 187
D Y+ PVC +C+ +Y
Sbjct: 343 DKYSRIVFPVCFVCFNLMY 361
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 21.4 bits (43), Expect = 5.2
Identities = 7/19 (36%), Positives = 10/19 (52%)
Frame = +3
Query: 150 EDQFVKYVGNLYTYSPYYT 206
+D F + N + Y P YT
Sbjct: 223 DDSFHRLTSNTFDYDPRYT 241
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 21.4 bits (43), Expect = 5.2
Identities = 6/17 (35%), Positives = 10/17 (58%)
Frame = -1
Query: 467 WLLYAQFQLPLQWQYYP 417
W++Y +Q +WQ P
Sbjct: 488 WVIYVTYQEEFKWQDSP 504
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.0 bits (42), Expect = 6.9
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 230 NYTGFLCGGIVRGVCIQIANIFHKL 156
NY FL GIV G C + F+++
Sbjct: 406 NYL-FLAVGIVGGACSDVEQNFYEV 429
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.0 bits (42), Expect = 6.9
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -2
Query: 409 YFYQSFDASNSQKW*IVFVVNAE 341
YFY + SNS ++F N E
Sbjct: 142 YFYSKSNGSNSSNSDVLFKQNKE 164
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 20.6 bits (41), Expect = 9.1
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 479 DL*AWLLYAQFQLPLQWQYYP 417
DL +L F+L + WQ YP
Sbjct: 79 DLLFLILGLPFELSVFWQQYP 99
>AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor
protein.
Length = 139
Score = 20.6 bits (41), Expect = 9.1
Identities = 5/12 (41%), Positives = 9/12 (75%)
Frame = +2
Query: 92 CRNCVHQSFTTI 127
CRNC+H + ++
Sbjct: 35 CRNCIHPTVFSV 46
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 20.6 bits (41), Expect = 9.1
Identities = 5/12 (41%), Positives = 9/12 (75%)
Frame = +2
Query: 92 CRNCVHQSFTTI 127
CRNC+H + ++
Sbjct: 483 CRNCIHPTVFSV 494
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 20.6 bits (41), Expect = 9.1
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = -2
Query: 355 VVNAELLFSERPNI 314
++ A ++FSERPN+
Sbjct: 478 LLTAIVIFSERPNL 491
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,055
Number of Sequences: 438
Number of extensions: 3454
Number of successful extensions: 18
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13051674
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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