Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30887
         (726 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC132917-1|AAI32918.1|  579|Homo sapiens zinc finger protein 248...    31   5.6  
BC132915-1|AAI32916.1|  579|Homo sapiens zinc finger protein 248...    31   5.6  
AL135791-5|CAI12322.1|  579|Homo sapiens zinc finger protein 248...    31   5.6  
AJ491695-1|CAD36954.1|  579|Homo sapiens zinc finger protein 248...    31   5.6  
AJ245587-1|CAB52547.1|  345|Homo sapiens Kruppel-type zinc finge...    31   5.6  
M69008-1|AAA52754.1|  623|Homo sapiens alpha-1 type XIII collage...    30   7.3  

>BC132917-1|AAI32918.1|  579|Homo sapiens zinc finger protein 248
           protein.
          Length = 579

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
 Frame = +3

Query: 534 KSYSY----LNFSKTRHRYEIRRTFVSEKARRTGTCG 632
           KSY Y     NFSK  H  ++RR    EK    G CG
Sbjct: 350 KSYDYNENGSNFSKKSHLTQLRRAHTGEKTFECGECG 386


>BC132915-1|AAI32916.1|  579|Homo sapiens zinc finger protein 248
           protein.
          Length = 579

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
 Frame = +3

Query: 534 KSYSY----LNFSKTRHRYEIRRTFVSEKARRTGTCG 632
           KSY Y     NFSK  H  ++RR    EK    G CG
Sbjct: 350 KSYDYNENGSNFSKKSHLTQLRRAHTGEKTFECGECG 386


>AL135791-5|CAI12322.1|  579|Homo sapiens zinc finger protein 248
           protein.
          Length = 579

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
 Frame = +3

Query: 534 KSYSY----LNFSKTRHRYEIRRTFVSEKARRTGTCG 632
           KSY Y     NFSK  H  ++RR    EK    G CG
Sbjct: 350 KSYDYNENGSNFSKKSHLTQLRRAHTGEKTFECGECG 386


>AJ491695-1|CAD36954.1|  579|Homo sapiens zinc finger protein 248
           protein.
          Length = 579

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
 Frame = +3

Query: 534 KSYSY----LNFSKTRHRYEIRRTFVSEKARRTGTCG 632
           KSY Y     NFSK  H  ++RR    EK    G CG
Sbjct: 350 KSYDYNENGSNFSKKSHLTQLRRAHTGEKTFECGECG 386


>AJ245587-1|CAB52547.1|  345|Homo sapiens Kruppel-type zinc finger
           protein.
          Length = 345

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
 Frame = +3

Query: 534 KSYSY----LNFSKTRHRYEIRRTFVSEKARRTGTCG 632
           KSY Y     NFSK  H  ++RR    EK    G CG
Sbjct: 116 KSYDYNENGSNFSKKSHLTQLRRAHTGEKTFECGECG 152


>M69008-1|AAA52754.1|  623|Homo sapiens alpha-1 type XIII collagen
           protein.
          Length = 623

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = -3

Query: 523 SAGRDGIAGRKKARGENKKGKIEKHNKSINCVSYTFLTISLV 398
           +AG  G  G K ++GE  KG++  +N +IN      LT++L+
Sbjct: 329 AAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEILTLALM 370


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,140,338
Number of Sequences: 237096
Number of extensions: 1523380
Number of successful extensions: 2213
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2213
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)