Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30883
         (573 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069733-1|AAL39878.1|  541|Drosophila melanogaster LP05116p pro...   101   7e-22
AE014296-2793|AAF49418.2|  541|Drosophila melanogaster CG9701-PA...   101   7e-22
AE013599-2066|AAM70973.1|  599|Drosophila melanogaster CG30468-P...    29   4.5  

>AY069733-1|AAL39878.1|  541|Drosophila melanogaster LP05116p
           protein.
          Length = 541

 Score =  101 bits (242), Expect = 7e-22
 Identities = 38/77 (49%), Positives = 62/77 (80%)
 Frame = +3

Query: 255 YLNALLDTIEEGSDIRGYTAWSMIDNFEWMQGYADKFGLYEVDFTSPERTRTPRKSAYIY 434
           YL+A+LD +E+G++I GY AWS++D++EW  G+++KFGLY VDF SP+RTRTP+ SA ++
Sbjct: 426 YLSAVLDAMEDGANISGYIAWSLMDSYEWKAGFSEKFGLYHVDFNSPQRTRTPKISARVF 485

Query: 435 KEIVRTKSLDPDYEPEI 485
            ++ +T ++D  Y P++
Sbjct: 486 AQLCKTNTIDWSYRPKL 502



 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 29/76 (38%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
 Frame = +1

Query: 25  GMYGVPSYLDDLGVVMVPDXXXXXXXXXX-LQEVPWGFYKLFKEIRNVYGNPTLYVTENG 201
           G + VPS+  D+GVV   +           L+  P G Y L   I   Y  P + VTENG
Sbjct: 348 GKFPVPSFNHDMGVVESQEGVDWPGSGSVWLKVYPKGMYNLLMWIHREYNAPEIIVTENG 407

Query: 202 WSTDAGLIDDDRVRYY 249
            S   GL D  RV YY
Sbjct: 408 VSDRGGLEDYARVDYY 423


>AE014296-2793|AAF49418.2|  541|Drosophila melanogaster CG9701-PA
           protein.
          Length = 541

 Score =  101 bits (242), Expect = 7e-22
 Identities = 38/77 (49%), Positives = 62/77 (80%)
 Frame = +3

Query: 255 YLNALLDTIEEGSDIRGYTAWSMIDNFEWMQGYADKFGLYEVDFTSPERTRTPRKSAYIY 434
           YL+A+LD +E+G++I GY AWS++D++EW  G+++KFGLY VDF SP+RTRTP+ SA ++
Sbjct: 426 YLSAVLDAMEDGANISGYIAWSLMDSYEWKAGFSEKFGLYHVDFNSPQRTRTPKISARVF 485

Query: 435 KEIVRTKSLDPDYEPEI 485
            ++ +T ++D  Y P++
Sbjct: 486 AQLCKTNTIDWSYRPKL 502



 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 29/76 (38%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
 Frame = +1

Query: 25  GMYGVPSYLDDLGVVMVPDXXXXXXXXXX-LQEVPWGFYKLFKEIRNVYGNPTLYVTENG 201
           G + VPS+  D+GVV   +           L+  P G Y L   I   Y  P + VTENG
Sbjct: 348 GKFPVPSFNHDMGVVESQEGVDWPGSGSVWLKVYPKGMYNLLMWIHREYNAPEIIVTENG 407

Query: 202 WSTDAGLIDDDRVRYY 249
            S   GL D  RV YY
Sbjct: 408 VSDRGGLEDYARVDYY 423


>AE013599-2066|AAM70973.1|  599|Drosophila melanogaster CG30468-PA
           protein.
          Length = 599

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -2

Query: 569 FLSQNFMFPKQYSRYVNTISIFLC 498
           FL+Q F FP+QY+R +  I + +C
Sbjct: 348 FLAQPFPFPRQYNRKLKLIFMLVC 371


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,541,489
Number of Sequences: 53049
Number of extensions: 634465
Number of successful extensions: 1997
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1995
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2255362491
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)