Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30883
(573 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF099915-3|AAC68766.1| 475|Caenorhabditis elegans Hypothetical ... 86 2e-17
U41557-9|AAA83309.1| 479|Caenorhabditis elegans Hypothetical pr... 75 4e-14
Z92807-2|CAD21652.1| 689|Caenorhabditis elegans Hypothetical pr... 31 0.77
Z92807-1|CAB07264.1| 747|Caenorhabditis elegans Hypothetical pr... 31 0.77
AB039949-1|BAC06512.1| 747|Caenorhabditis elegans kinesin protein. 31 0.77
AB017164-1|BAA32661.1| 689|Caenorhabditis elegans Kinesin like ... 31 0.77
Z83112-1|CAB05538.1| 742|Caenorhabditis elegans Hypothetical pr... 29 3.1
AF125964-3|ABA03110.1| 805|Caenorhabditis elegans Hypothetical ... 29 3.1
AF047655-2|ABD63245.1| 805|Caenorhabditis elegans Hypothetical ... 29 3.1
AF025465-10|AAB71023.1| 805|Caenorhabditis elegans Hypothetical... 29 3.1
AF016422-2|AAG24174.1| 805|Caenorhabditis elegans Hypothetical ... 29 3.1
AC024831-3|ABD63213.1| 805|Caenorhabditis elegans Hypothetical ... 29 3.1
Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z81097-5|CAB03168.1| 243|Caenorhabditis elegans Hypothetical pr... 27 9.5
AL110485-33|CAN86916.1| 360|Caenorhabditis elegans Hypothetical... 27 9.5
AL110485-32|CAB60360.1| 375|Caenorhabditis elegans Hypothetical... 27 9.5
>AF099915-3|AAC68766.1| 475|Caenorhabditis elegans Hypothetical
protein E02H9.5 protein.
Length = 475
Score = 85.8 bits (203), Expect = 2e-17
Identities = 34/65 (52%), Positives = 49/65 (75%)
Frame = +3
Query: 255 YLNALLDTIEEGSDIRGYTAWSMIDNFEWMQGYADKFGLYEVDFTSPERTRTPRKSAYIY 434
+L A+ ++EG ++ GYT W+++DNFEW G+ KFGL EVDF SP++TRT +KSAY Y
Sbjct: 403 HLEAVAKALDEGCNVIGYTVWTLMDNFEWDDGFELKFGLCEVDFESPDKTRTMKKSAYFY 462
Query: 435 KEIVR 449
KE ++
Sbjct: 463 KEFIK 467
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/60 (25%), Positives = 25/60 (41%)
Frame = +1
Query: 55 DLGVVMVPDXXXXXXXXXXLQEVPWGFYKLFKEIRNVYGNPTLYVTENGWSTDAGLIDDD 234
D G V V ++ P G K+ + ++ Y N +++TENG G +D
Sbjct: 330 DGGYVFVEGKWDKICGETWIRYAPDGLLKILRYVKEKYANTPVFITENGCMDIVGQDQED 389
>U41557-9|AAA83309.1| 479|Caenorhabditis elegans Hypothetical
protein C50F7.10 protein.
Length = 479
Score = 74.9 bits (176), Expect = 4e-14
Identities = 30/65 (46%), Positives = 45/65 (69%)
Frame = +3
Query: 255 YLNALLDTIEEGSDIRGYTAWSMIDNFEWMQGYADKFGLYEVDFTSPERTRTPRKSAYIY 434
+L A+ +EEG ++ GYT W+++DNFEW G+ KFG+ VDF SP++TRT + SA Y
Sbjct: 406 HLEAVAKALEEGCNVIGYTLWTLMDNFEWDDGFGVKFGICRVDFDSPDKTRTMKYSAKYY 465
Query: 435 KEIVR 449
+ +R
Sbjct: 466 QTFIR 470
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 124 PWGFYKLFKEIRNVYGNPTLYVTENG 201
P G + L K +R+ Y N +++TENG
Sbjct: 353 PDGLFGLLKYVRDKYNNIPVFITENG 378
>Z92807-2|CAD21652.1| 689|Caenorhabditis elegans Hypothetical
protein K11D9.1b protein.
Length = 689
Score = 30.7 bits (66), Expect = 0.77
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +3
Query: 393 PERTRTPRKSAYIYKEIVRTKSLDPDYEPEILLDGTQENRNCIYV 527
P++ P + + E++R DY P + DG ENR + V
Sbjct: 223 PQQDVQPSNGNFAFAEMIRNYRAQIDYRPLSMFDGVNENRISVCV 267
>Z92807-1|CAB07264.1| 747|Caenorhabditis elegans Hypothetical
protein K11D9.1a protein.
Length = 747
Score = 30.7 bits (66), Expect = 0.77
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +3
Query: 393 PERTRTPRKSAYIYKEIVRTKSLDPDYEPEILLDGTQENRNCIYV 527
P++ P + + E++R DY P + DG ENR + V
Sbjct: 281 PQQDVQPSNGNFAFAEMIRNYRAQIDYRPLSMFDGVNENRISVCV 325
>AB039949-1|BAC06512.1| 747|Caenorhabditis elegans kinesin protein.
Length = 747
Score = 30.7 bits (66), Expect = 0.77
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +3
Query: 393 PERTRTPRKSAYIYKEIVRTKSLDPDYEPEILLDGTQENRNCIYV 527
P++ P + + E++R DY P + DG ENR + V
Sbjct: 281 PQQDVQPSNGNFAFAEMIRNYRAQIDYRPLSMFDGVNENRISVCV 325
>AB017164-1|BAA32661.1| 689|Caenorhabditis elegans Kinesin like
protein (klp-7) protein.
Length = 689
Score = 30.7 bits (66), Expect = 0.77
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +3
Query: 393 PERTRTPRKSAYIYKEIVRTKSLDPDYEPEILLDGTQENRNCIYV 527
P++ P + + E++R DY P + DG ENR + V
Sbjct: 223 PQQDVQPSNGNFAFAEMIRNYRAQIDYRPLSMFDGVNENRISVCV 267
>Z83112-1|CAB05538.1| 742|Caenorhabditis elegans Hypothetical
protein K02B7.1 protein.
Length = 742
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 60 RSCYGARS*LAPIAVKLATGSTVGLL*IVQRDTECIRQPYSVR 188
+S +G R L V ++ S VG +V+R+ C+ P+S R
Sbjct: 696 KSSFGGRVTLTNTVVVVSADSIVGHAVVVKRNNNCVALPFSRR 738
>AF125964-3|ABA03110.1| 805|Caenorhabditis elegans Hypothetical
protein W03G1.4 protein.
Length = 805
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 60 RSCYGARS*LAPIAVKLATGSTVGLL*IVQRDTECIRQPYSVR 188
+S +G R L V ++ S VG +V+R+ C+ P+S R
Sbjct: 759 KSSFGGRVTLTNTVVVVSADSIVGHAVVVKRNNNCVALPFSRR 801
>AF047655-2|ABD63245.1| 805|Caenorhabditis elegans Hypothetical
protein C17B7.7 protein.
Length = 805
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 60 RSCYGARS*LAPIAVKLATGSTVGLL*IVQRDTECIRQPYSVR 188
+S +G R L V ++ S VG +V+R+ C+ P+S R
Sbjct: 759 KSSFGGRVTLTNTVVVVSADSIVGHAVVVKRNNNCVALPFSRR 801
>AF025465-10|AAB71023.1| 805|Caenorhabditis elegans Hypothetical
protein K02E7.3 protein.
Length = 805
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 60 RSCYGARS*LAPIAVKLATGSTVGLL*IVQRDTECIRQPYSVR 188
+S +G R L V ++ S VG +V+R+ C+ P+S R
Sbjct: 759 KSSFGGRVTLTNTVVVVSADSIVGHAVVVKRNNNCVALPFSRR 801
>AF016422-2|AAG24174.1| 805|Caenorhabditis elegans Hypothetical
protein R09E12.6 protein.
Length = 805
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 60 RSCYGARS*LAPIAVKLATGSTVGLL*IVQRDTECIRQPYSVR 188
+S +G R L V ++ S VG +V+R+ C+ P+S R
Sbjct: 759 KSSFGGRVTLTNTVVVVSADSIVGHAVVVKRNNNCVALPFSRR 801
>AC024831-3|ABD63213.1| 805|Caenorhabditis elegans Hypothetical
protein Y55F3C.6 protein.
Length = 805
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 60 RSCYGARS*LAPIAVKLATGSTVGLL*IVQRDTECIRQPYSVR 188
+S +G R L V ++ S VG +V+R+ C+ P+S R
Sbjct: 759 KSSFGGRVTLTNTVVVVSADSIVGHAVVVKRNNNCVALPFSRR 801
>Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical
protein F40F11.2b protein.
Length = 1607
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +3
Query: 375 EVDFTSPERTRTPRKSAYIYKEIVRTKSLDPDYEPEILLDGTQE 506
E +F S + R PR S ++Y+E +P+ EPE D E
Sbjct: 839 EYEFDSYDENR-PRGSPFVYEEPESESESEPEAEPEPKKDNFAE 881
>Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical
protein F40F11.2a protein.
Length = 1593
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +3
Query: 375 EVDFTSPERTRTPRKSAYIYKEIVRTKSLDPDYEPEILLDGTQE 506
E +F S + R PR S ++Y+E +P+ EPE D E
Sbjct: 825 EYEFDSYDENR-PRGSPFVYEEPESESESEPEAEPEPKKDNFAE 867
>Z81097-5|CAB03168.1| 243|Caenorhabditis elegans Hypothetical
protein K07A1.7 protein.
Length = 243
Score = 27.1 bits (57), Expect = 9.5
Identities = 26/74 (35%), Positives = 32/74 (43%)
Frame = -3
Query: 412 GVRVRSGLVKSTS*RPNLSA*PCIHSKLSIIDQAVYPLISLPSSIVSKSAFKYSYNIALG 233
G VR L+KS NL A PC+ K + YPLI I S F I+L
Sbjct: 84 GDDVRLCLLKSLG-AHNLRAIPCVQCKDELKVYDKYPLIDGVFYISPVSQFGPKTEISLD 142
Query: 232 HRRSDQRQWTSRSL 191
RR +Q +R L
Sbjct: 143 GRRFYLQQLCARCL 156
>AL110485-33|CAN86916.1| 360|Caenorhabditis elegans Hypothetical
protein Y46G5A.18b protein.
Length = 360
Score = 27.1 bits (57), Expect = 9.5
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +1
Query: 223 IDDDRVRYYRNI*MRSWTLLKRAAISGGTRPGL*STTLNGCRV-TPTNSASTKLTSQARN 399
ID D V RN+ MR W ++ A I T L +G + TP +A KL + N
Sbjct: 74 IDTDGVNVKRNMGMRKWRRVEHARIM-LTFTDLDDICEDGSDIATPPTTAFDKLFADREN 132
Query: 400 VRVLQE 417
+++ E
Sbjct: 133 MKLWNE 138
>AL110485-32|CAB60360.1| 375|Caenorhabditis elegans Hypothetical
protein Y46G5A.18a protein.
Length = 375
Score = 27.1 bits (57), Expect = 9.5
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +1
Query: 223 IDDDRVRYYRNI*MRSWTLLKRAAISGGTRPGL*STTLNGCRV-TPTNSASTKLTSQARN 399
ID D V RN+ MR W ++ A I T L +G + TP +A KL + N
Sbjct: 74 IDTDGVNVKRNMGMRKWRRVEHARIM-LTFTDLDDICEDGSDIATPPTTAFDKLFADREN 132
Query: 400 VRVLQE 417
+++ E
Sbjct: 133 MKLWNE 138
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,634,053
Number of Sequences: 27780
Number of extensions: 325903
Number of successful extensions: 746
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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