Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30882
(698 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50553-1|AAB95637.1| 662|Homo sapiens helicase like protein 2 p... 71 5e-12
BC011819-1|AAH11819.1| 662|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 71 5e-12
AL391647-2|CAI41416.1| 662|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 71 5e-12
AF061337-1|AAC34298.1| 662|Homo sapiens DEAD box RNA helicase D... 71 5e-12
AF000983-1|AAC51830.1| 662|Homo sapiens dead box, X isoform pro... 71 5e-12
AF000982-1|AAC51829.1| 662|Homo sapiens dead box, X isoform pro... 71 5e-12
AB208983-1|BAD92220.1| 674|Homo sapiens DEAD/H (Asp-Glu-Ala-Asp... 71 5e-12
BC034942-1|AAH34942.1| 660|Homo sapiens DDX3Y protein protein. 69 2e-11
AF000985-1|AAC51832.1| 660|Homo sapiens dead box, Y isoform pro... 69 2e-11
AF000984-1|AAC51831.1| 660|Homo sapiens dead box, Y isoform pro... 69 2e-11
BC088362-1|AAH88362.1| 724|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 44 7e-04
BC047455-1|AAH47455.1| 690|Homo sapiens DDX4 protein protein. 44 7e-04
AY004154-1|AAF86585.1| 724|Homo sapiens DEAD box RNA helicase p... 44 7e-04
AL137462-1|CAB70750.1| 635|Homo sapiens hypothetical protein pr... 44 7e-04
AF262962-1|AAF72705.1| 724|Homo sapiens VASA protein protein. 44 7e-04
AK127581-1|BAC87042.1| 980|Homo sapiens protein ( Homo sapiens ... 31 5.2
AB018297-1|BAA34474.2| 1174|Homo sapiens KIAA0754 protein protein. 31 5.2
BC089447-1|AAH89447.1| 981|Homo sapiens proline-rich transmembr... 30 6.9
BC040508-1|AAH40508.1| 597|Homo sapiens PRRT3 protein protein. 30 6.9
AY507107-1|AAS87021.1| 1043|Homo sapiens NMDA receptor subunit 3... 30 6.9
>U50553-1|AAB95637.1| 662|Homo sapiens helicase like protein 2
protein.
Length = 662
Score = 70.5 bits (165), Expect = 5e-12
Identities = 35/61 (57%), Positives = 41/61 (67%)
Frame = +3
Query: 516 ERQELLLFGTGNTGINFSKYEDIPVEASGDRVPDCITSFEDVNLTELIAGQILSLARYDK 695
ER E LF GNTGINF KY+DIPVEA+G+ P I SF DV + E+I G I L RY +
Sbjct: 144 ERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNI-ELTRYTR 202
Query: 696 P 698
P
Sbjct: 203 P 203
Score = 43.6 bits (98), Expect = 7e-04
Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Frame = +3
Query: 108 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPPHLRRQ 227
MS+V +N GL+QQ AGLDL + S GRYIPPHLR +
Sbjct: 1 MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNR 46
>BC011819-1|AAH11819.1| 662|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 3, X-linked protein.
Length = 662
Score = 70.5 bits (165), Expect = 5e-12
Identities = 35/61 (57%), Positives = 41/61 (67%)
Frame = +3
Query: 516 ERQELLLFGTGNTGINFSKYEDIPVEASGDRVPDCITSFEDVNLTELIAGQILSLARYDK 695
ER E LF GNTGINF KY+DIPVEA+G+ P I SF DV + E+I G I L RY +
Sbjct: 144 ERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNI-ELTRYTR 202
Query: 696 P 698
P
Sbjct: 203 P 203
Score = 43.6 bits (98), Expect = 7e-04
Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Frame = +3
Query: 108 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPPHLRRQ 227
MS+V +N GL+QQ AGLDL + S GRYIPPHLR +
Sbjct: 1 MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNR 46
>AL391647-2|CAI41416.1| 662|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 3, X-linked protein.
Length = 662
Score = 70.5 bits (165), Expect = 5e-12
Identities = 35/61 (57%), Positives = 41/61 (67%)
Frame = +3
Query: 516 ERQELLLFGTGNTGINFSKYEDIPVEASGDRVPDCITSFEDVNLTELIAGQILSLARYDK 695
ER E LF GNTGINF KY+DIPVEA+G+ P I SF DV + E+I G I L RY +
Sbjct: 144 ERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNI-ELTRYTR 202
Query: 696 P 698
P
Sbjct: 203 P 203
Score = 43.6 bits (98), Expect = 7e-04
Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Frame = +3
Query: 108 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPPHLRRQ 227
MS+V +N GL+QQ AGLDL + S GRYIPPHLR +
Sbjct: 1 MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNR 46
>AF061337-1|AAC34298.1| 662|Homo sapiens DEAD box RNA helicase DDX3
protein.
Length = 662
Score = 70.5 bits (165), Expect = 5e-12
Identities = 35/61 (57%), Positives = 41/61 (67%)
Frame = +3
Query: 516 ERQELLLFGTGNTGINFSKYEDIPVEASGDRVPDCITSFEDVNLTELIAGQILSLARYDK 695
ER E LF GNTGINF KY+DIPVEA+G+ P I SF DV + E+I G I L RY +
Sbjct: 144 ERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNI-ELTRYTR 202
Query: 696 P 698
P
Sbjct: 203 P 203
Score = 43.6 bits (98), Expect = 7e-04
Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Frame = +3
Query: 108 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPPHLRRQ 227
MS+V +N GL+QQ AGLDL + S GRYIPPHLR +
Sbjct: 1 MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNR 46
>AF000983-1|AAC51830.1| 662|Homo sapiens dead box, X isoform
protein.
Length = 662
Score = 70.5 bits (165), Expect = 5e-12
Identities = 35/61 (57%), Positives = 41/61 (67%)
Frame = +3
Query: 516 ERQELLLFGTGNTGINFSKYEDIPVEASGDRVPDCITSFEDVNLTELIAGQILSLARYDK 695
ER E LF GNTGINF KY+DIPVEA+G+ P I SF DV + E+I G I L RY +
Sbjct: 144 ERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNI-ELTRYTR 202
Query: 696 P 698
P
Sbjct: 203 P 203
Score = 43.6 bits (98), Expect = 7e-04
Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Frame = +3
Query: 108 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPPHLRRQ 227
MS+V +N GL+QQ AGLDL + S GRYIPPHLR +
Sbjct: 1 MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNR 46
>AF000982-1|AAC51829.1| 662|Homo sapiens dead box, X isoform
protein.
Length = 662
Score = 70.5 bits (165), Expect = 5e-12
Identities = 35/61 (57%), Positives = 41/61 (67%)
Frame = +3
Query: 516 ERQELLLFGTGNTGINFSKYEDIPVEASGDRVPDCITSFEDVNLTELIAGQILSLARYDK 695
ER E LF GNTGINF KY+DIPVEA+G+ P I SF DV + E+I G I L RY +
Sbjct: 144 ERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNI-ELTRYTR 202
Query: 696 P 698
P
Sbjct: 203 P 203
Score = 43.6 bits (98), Expect = 7e-04
Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Frame = +3
Query: 108 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPPHLRRQ 227
MS+V +N GL+QQ AGLDL + S GRYIPPHLR +
Sbjct: 1 MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNR 46
>AB208983-1|BAD92220.1| 674|Homo sapiens DEAD/H
(Asp-Glu-Ala-Asp/His) box polypeptide 3 variant protein.
Length = 674
Score = 70.5 bits (165), Expect = 5e-12
Identities = 35/61 (57%), Positives = 41/61 (67%)
Frame = +3
Query: 516 ERQELLLFGTGNTGINFSKYEDIPVEASGDRVPDCITSFEDVNLTELIAGQILSLARYDK 695
ER E LF GNTGINF KY+DIPVEA+G+ P I SF DV + E+I G I L RY +
Sbjct: 156 ERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNI-ELTRYTR 214
Query: 696 P 698
P
Sbjct: 215 P 215
Score = 45.2 bits (102), Expect = 2e-04
Identities = 24/48 (50%), Positives = 29/48 (60%), Gaps = 6/48 (12%)
Frame = +3
Query: 102 SNMSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPPHLRRQ 227
S MS+V +N GL+QQ AGLDL + S GRYIPPHLR +
Sbjct: 11 SGMSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNR 58
>BC034942-1|AAH34942.1| 660|Homo sapiens DDX3Y protein protein.
Length = 660
Score = 68.9 bits (161), Expect = 2e-11
Identities = 33/61 (54%), Positives = 41/61 (67%)
Frame = +3
Query: 516 ERQELLLFGTGNTGINFSKYEDIPVEASGDRVPDCITSFEDVNLTELIAGQILSLARYDK 695
ER E LF GNTGINF KY+DIPVEA+G P I +F D+++ E+I G I L RY +
Sbjct: 142 ERLEQELFSGGNTGINFEKYDDIPVEATGSNCPPHIENFSDIDMGEIIMGNI-ELTRYTR 200
Query: 696 P 698
P
Sbjct: 201 P 201
Score = 39.5 bits (88), Expect = 0.011
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Frame = +3
Query: 108 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPPHLRRQ 227
MS+V +N L+QQLA LDL + + S GRYIPPHLR +
Sbjct: 1 MSHVVVKNDPELDQQLANLDLNSEKQSGGASTASKGRYIPPHLRNR 46
>AF000985-1|AAC51832.1| 660|Homo sapiens dead box, Y isoform
protein.
Length = 660
Score = 68.9 bits (161), Expect = 2e-11
Identities = 33/61 (54%), Positives = 41/61 (67%)
Frame = +3
Query: 516 ERQELLLFGTGNTGINFSKYEDIPVEASGDRVPDCITSFEDVNLTELIAGQILSLARYDK 695
ER E LF GNTGINF KY+DIPVEA+G P I +F D+++ E+I G I L RY +
Sbjct: 142 ERLEQELFSGGNTGINFEKYDDIPVEATGSNCPPHIENFSDIDMGEIIMGNI-ELTRYTR 200
Query: 696 P 698
P
Sbjct: 201 P 201
Score = 39.5 bits (88), Expect = 0.011
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Frame = +3
Query: 108 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPPHLRRQ 227
MS+V +N L+QQLA LDL + + S GRYIPPHLR +
Sbjct: 1 MSHVVVKNDPELDQQLANLDLNSEKQSGGASTASKGRYIPPHLRNK 46
>AF000984-1|AAC51831.1| 660|Homo sapiens dead box, Y isoform
protein.
Length = 660
Score = 68.9 bits (161), Expect = 2e-11
Identities = 33/61 (54%), Positives = 41/61 (67%)
Frame = +3
Query: 516 ERQELLLFGTGNTGINFSKYEDIPVEASGDRVPDCITSFEDVNLTELIAGQILSLARYDK 695
ER E LF GNTGINF KY+DIPVEA+G P I +F D+++ E+I G I L RY +
Sbjct: 142 ERLEQELFSGGNTGINFEKYDDIPVEATGSNCPPHIENFSDIDMGEIIMGNI-ELTRYTR 200
Query: 696 P 698
P
Sbjct: 201 P 201
Score = 39.5 bits (88), Expect = 0.011
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Frame = +3
Query: 108 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPPHLRRQ 227
MS+V +N L+QQLA LDL + + S GRYIPPHLR +
Sbjct: 1 MSHVVVKNDPELDQQLANLDLNSEKQSGGASTASKGRYIPPHLRNK 46
>BC088362-1|AAH88362.1| 724|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 4 protein.
Length = 724
Score = 43.6 bits (98), Expect = 7e-04
Identities = 23/54 (42%), Positives = 30/54 (55%)
Frame = +3
Query: 534 LFGTGNTGINFSKYEDIPVEASGDRVPDCITSFEDVNLTELIAGQILSLARYDK 695
+F TGINF KY+ I VE SG P I +FE+ NL + + I + A Y K
Sbjct: 258 IFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNI-AKAGYTK 310
>BC047455-1|AAH47455.1| 690|Homo sapiens DDX4 protein protein.
Length = 690
Score = 43.6 bits (98), Expect = 7e-04
Identities = 23/54 (42%), Positives = 30/54 (55%)
Frame = +3
Query: 534 LFGTGNTGINFSKYEDIPVEASGDRVPDCITSFEDVNLTELIAGQILSLARYDK 695
+F TGINF KY+ I VE SG P I +FE+ NL + + I + A Y K
Sbjct: 224 IFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNI-AKAGYTK 276
>AY004154-1|AAF86585.1| 724|Homo sapiens DEAD box RNA helicase
protein.
Length = 724
Score = 43.6 bits (98), Expect = 7e-04
Identities = 23/54 (42%), Positives = 30/54 (55%)
Frame = +3
Query: 534 LFGTGNTGINFSKYEDIPVEASGDRVPDCITSFEDVNLTELIAGQILSLARYDK 695
+F TGINF KY+ I VE SG P I +FE+ NL + + I + A Y K
Sbjct: 258 IFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNI-AKAGYTK 310
>AL137462-1|CAB70750.1| 635|Homo sapiens hypothetical protein
protein.
Length = 635
Score = 43.6 bits (98), Expect = 7e-04
Identities = 23/54 (42%), Positives = 30/54 (55%)
Frame = +3
Query: 534 LFGTGNTGINFSKYEDIPVEASGDRVPDCITSFEDVNLTELIAGQILSLARYDK 695
+F TGINF KY+ I VE SG P I +FE+ NL + + I + A Y K
Sbjct: 169 IFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNI-AKAGYTK 221
>AF262962-1|AAF72705.1| 724|Homo sapiens VASA protein protein.
Length = 724
Score = 43.6 bits (98), Expect = 7e-04
Identities = 23/54 (42%), Positives = 30/54 (55%)
Frame = +3
Query: 534 LFGTGNTGINFSKYEDIPVEASGDRVPDCITSFEDVNLTELIAGQILSLARYDK 695
+F TGINF KY+ I VE SG P I +FE+ NL + + I + A Y K
Sbjct: 258 IFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNI-AKAGYTK 310
>AK127581-1|BAC87042.1| 980|Homo sapiens protein ( Homo sapiens
cDNA FLJ45676 fis, clone DFNES2011221. ).
Length = 980
Score = 30.7 bits (66), Expect = 5.2
Identities = 18/84 (21%), Positives = 36/84 (42%)
Frame = +3
Query: 105 NMSNVTNQNGTGLEQQLAGLDLQPQAPKSTGRYIPPHLRRQLQATSDQGRTVDLRMANQS 284
++ V +++G E L+ QAP R P + + LQ S + + L + +
Sbjct: 574 SVEKVCDEDGEAKELDYQATLLEDQAPAHFHRNFPEQVFQDLQRKSPESEILSLHLLVEE 633
Query: 285 VGMNPRNGMIVNANGTDAGLATCD 356
+ +NP VN + +A+ +
Sbjct: 634 LRLNPDGVETVNDTKPELNVASSE 657
>AB018297-1|BAA34474.2| 1174|Homo sapiens KIAA0754 protein protein.
Length = 1174
Score = 30.7 bits (66), Expect = 5.2
Identities = 18/84 (21%), Positives = 36/84 (42%)
Frame = +3
Query: 105 NMSNVTNQNGTGLEQQLAGLDLQPQAPKSTGRYIPPHLRRQLQATSDQGRTVDLRMANQS 284
++ V +++G E L+ QAP R P + + LQ S + + L + +
Sbjct: 457 SVEKVCDEDGEAKELDYQATLLEDQAPAHFHRNFPEQVFQDLQRKSPESEILSLHLLVEE 516
Query: 285 VGMNPRNGMIVNANGTDAGLATCD 356
+ +NP VN + +A+ +
Sbjct: 517 LRLNPDGVETVNDTKPELNVASSE 540
>BC089447-1|AAH89447.1| 981|Homo sapiens proline-rich transmembrane
protein 3 protein.
Length = 981
Score = 30.3 bits (65), Expect = 6.9
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = +3
Query: 123 NQNGTGLEQQLAGLDLQPQAPKSTGRYIPPHLRRQLQATSDQGRTVDLR-MANQSVG--M 293
++NG G L+ LDL+P +P + R I L R+ + LR +A+ G +
Sbjct: 789 SRNGVGPAPSLSELDLRPPSPINLSRSIDAALFREHLVRDSVFQRCGLRGLASPPPGGAL 848
Query: 294 NPRNGMIVNANGTDAG 341
PR G A DAG
Sbjct: 849 RPRRGSHPKAELDDAG 864
>BC040508-1|AAH40508.1| 597|Homo sapiens PRRT3 protein protein.
Length = 597
Score = 30.3 bits (65), Expect = 6.9
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = +3
Query: 123 NQNGTGLEQQLAGLDLQPQAPKSTGRYIPPHLRRQLQATSDQGRTVDLR-MANQSVG--M 293
++NG G L+ LDL+P +P + R I L R+ + LR +A+ G +
Sbjct: 405 SRNGVGPAPSLSELDLRPPSPINLSRSIDATLFREHLVRDSVFQRCGLRGLASPPPGGAL 464
Query: 294 NPRNGMIVNANGTDAG 341
PR G A DAG
Sbjct: 465 RPRRGSHPKAELDDAG 480
>AY507107-1|AAS87021.1| 1043|Homo sapiens NMDA receptor subunit 3B
protein.
Length = 1043
Score = 30.3 bits (65), Expect = 6.9
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = +3
Query: 165 DLQPQAPKSTGRYIPPHLRRQLQATSDQGRTVDLRMANQS 284
DLQP P+S GR+ L R L TS QGRT + +A S
Sbjct: 325 DLQPAGPESPGRF----LARFLANTSFQGRTGPVWVAGSS 360
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,622,296
Number of Sequences: 237096
Number of extensions: 2437043
Number of successful extensions: 6564
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 6099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6547
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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