Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30882
(698 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 62 3e-10
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 48 6e-06
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 48 6e-06
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 48 6e-06
AC084152-4|AAR85899.1| 753|Caenorhabditis elegans Hypothetical ... 31 0.79
AC084152-3|AAK39314.2| 772|Caenorhabditis elegans Hypothetical ... 31 0.79
U80838-3|AAC71113.1| 453|Caenorhabditis elegans Abnormal cell l... 29 2.4
U80838-1|AAU05570.1| 597|Caenorhabditis elegans Abnormal cell l... 29 2.4
AF183400-1|AAF13188.1| 453|Caenorhabditis elegans LIN-42 protein. 29 2.4
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z83235-2|CAB05773.2| 265|Caenorhabditis elegans Hypothetical pr... 28 5.6
U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical pr... 28 5.6
U23484-16|AAK68297.1| 358|Caenorhabditis elegans Hypothetical p... 28 5.6
AF456248-1|AAL59606.1| 265|Caenorhabditis elegans secreted 2-im... 28 5.6
Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical p... 28 7.4
Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr... 28 7.4
AF003136-10|AAK21378.2| 1281|Caenorhabditis elegans High inciden... 28 7.4
Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z68751-7|CAA92977.2| 319|Caenorhabditis elegans Hypothetical pr... 27 9.8
U37430-4|AAB52675.1| 1616|Caenorhabditis elegans Vitellogenin st... 27 9.8
L16559-5|AAA27932.2| 365|Caenorhabditis elegans Hypothetical pr... 27 9.8
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 62.5 bits (145), Expect = 3e-10
Identities = 34/63 (53%), Positives = 41/63 (65%)
Frame = +3
Query: 510 RDERQELLLFGTGNTGINFSKYEDIPVEASGDRVPDCITSFEDVNLTELIAGQILSLARY 689
RDER E LF +GINF KYE+IPVEA+GD VP I+ F D++L E I I A Y
Sbjct: 128 RDERIEQELFSGQLSGINFDKYEEIPVEATGDDVPQPISLFSDLSLHEWIEENI-KTAGY 186
Query: 690 DKP 698
D+P
Sbjct: 187 DRP 189
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 48.0 bits (109), Expect = 6e-06
Identities = 25/61 (40%), Positives = 33/61 (54%)
Frame = +3
Query: 516 ERQELLLFGTGNTGINFSKYEDIPVEASGDRVPDCITSFEDVNLTELIAGQILSLARYDK 695
E E LF ++GINF KYE+IPVE SGD VP I F + + + + + Y K
Sbjct: 103 EYSESNLFHRTDSGINFDKYENIPVEVSGDSVPAAIEHFNEAGFGPAVMENV-NRSGYSK 161
Query: 696 P 698
P
Sbjct: 162 P 162
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 48.0 bits (109), Expect = 6e-06
Identities = 25/61 (40%), Positives = 33/61 (54%)
Frame = +3
Query: 516 ERQELLLFGTGNTGINFSKYEDIPVEASGDRVPDCITSFEDVNLTELIAGQILSLARYDK 695
E E LF ++GINF KYE+IPVE SGD VP I F + + + + + Y K
Sbjct: 87 EYSESNLFHRTDSGINFDKYENIPVEVSGDSVPAAIEHFNEAGFGPAVMENV-NRSGYSK 145
Query: 696 P 698
P
Sbjct: 146 P 146
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 48.0 bits (109), Expect = 6e-06
Identities = 25/61 (40%), Positives = 33/61 (54%)
Frame = +3
Query: 516 ERQELLLFGTGNTGINFSKYEDIPVEASGDRVPDCITSFEDVNLTELIAGQILSLARYDK 695
E E LF ++GINF KYE+IPVE SGD VP I F + + + + + Y K
Sbjct: 84 EYSESNLFHRTDSGINFDKYENIPVEVSGDSVPAAIEHFNEAGFGPAVMENV-NRSGYSK 142
Query: 696 P 698
P
Sbjct: 143 P 143
>AC084152-4|AAR85899.1| 753|Caenorhabditis elegans Hypothetical
protein Y102A11A.2b protein.
Length = 753
Score = 31.1 bits (67), Expect = 0.79
Identities = 25/88 (28%), Positives = 34/88 (38%), Gaps = 6/88 (6%)
Frame = +3
Query: 105 NMSNVTNQNGTGLEQQLAGLDLQPQAPKSTGRYI-----PPHLRRQLQATSDQGRTVDLR 269
N+ T+ +G L Q G + + + K R PHL RQL G TVD R
Sbjct: 17 NLQKSTSFSGAKLHYQYTGKEQKTSSSKDESRVHHSENRSPHLSRQLTVDYGGGSTVDQR 76
Query: 270 -MANQSVGMNPRNGMIVNANGTDAGLAT 350
+P + N N D G+ T
Sbjct: 77 SQLGTQATFSPGSSRKTNFNPYDPGVHT 104
>AC084152-3|AAK39314.2| 772|Caenorhabditis elegans Hypothetical
protein Y102A11A.2a protein.
Length = 772
Score = 31.1 bits (67), Expect = 0.79
Identities = 25/88 (28%), Positives = 34/88 (38%), Gaps = 6/88 (6%)
Frame = +3
Query: 105 NMSNVTNQNGTGLEQQLAGLDLQPQAPKSTGRYI-----PPHLRRQLQATSDQGRTVDLR 269
N+ T+ +G L Q G + + + K R PHL RQL G TVD R
Sbjct: 17 NLQKSTSFSGAKLHYQYTGKEQKTSSSKDESRVHHSENRSPHLSRQLTVDYGGGSTVDQR 76
Query: 270 -MANQSVGMNPRNGMIVNANGTDAGLAT 350
+P + N N D G+ T
Sbjct: 77 SQLGTQATFSPGSSRKTNFNPYDPGVHT 104
>U80838-3|AAC71113.1| 453|Caenorhabditis elegans Abnormal cell
lineage protein 42,isoform c protein.
Length = 453
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = -2
Query: 514 SRVTVLSNHSRLCEI*FGAHRQKASVNWNALQLLAPALSSGHSVVXWFII-LLTSHVARP 338
+RVT+ R CE+ +A + AL+ A +L + H + + +T H +
Sbjct: 119 ARVTMPDGALRACELLCEFETDRAKITVLALRS-AFSLQASHVSSNFHVFTFITKHSSTC 177
Query: 337 ASVPFAFTIIPFLGFIPT 284
A + IP+LG +PT
Sbjct: 178 ALTHIDYASIPYLGLLPT 195
>U80838-1|AAU05570.1| 597|Caenorhabditis elegans Abnormal cell
lineage protein 42,isoform b protein.
Length = 597
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = -2
Query: 514 SRVTVLSNHSRLCEI*FGAHRQKASVNWNALQLLAPALSSGHSVVXWFII-LLTSHVARP 338
+RVT+ R CE+ +A + AL+ A +L + H + + +T H +
Sbjct: 119 ARVTMPDGALRACELLCEFETDRAKITVLALRS-AFSLQASHVSSNFHVFTFITKHSSTC 177
Query: 337 ASVPFAFTIIPFLGFIPT 284
A + IP+LG +PT
Sbjct: 178 ALTHIDYASIPYLGLLPT 195
>AF183400-1|AAF13188.1| 453|Caenorhabditis elegans LIN-42 protein.
Length = 453
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = -2
Query: 514 SRVTVLSNHSRLCEI*FGAHRQKASVNWNALQLLAPALSSGHSVVXWFII-LLTSHVARP 338
+RVT+ R CE+ +A + AL+ A +L + H + + +T H +
Sbjct: 119 ARVTMPDGALRACELLCEFETDRAKITVLALRS-AFSLQASHVSSNFHVFTFITKHSSTC 177
Query: 337 ASVPFAFTIIPFLGFIPT 284
A + IP+LG +PT
Sbjct: 178 ALTHIDYASIPYLGLLPT 195
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 8/49 (16%)
Frame = +1
Query: 154 LLVW-TCSPRLLRVLVATYPRICVG-------NCRQPLIKVEQWISEWR 276
L VW TC R ++ Y R +G CR+ + +EQW+S+ R
Sbjct: 57 LRVWDTCGQENFRSIIRAYYRNALGALLVYDITCRKSFVHLEQWLSDLR 105
>Z83235-2|CAB05773.2| 265|Caenorhabditis elegans Hypothetical
protein K10C3.3 protein.
Length = 265
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 276 NQSVGMNPRNGMIVNANGTDAGLATCD 356
+QSV M ++ NAN TDAG +C+
Sbjct: 177 SQSVSMEGSTVIVTNANYTDAGTYSCE 203
>U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical
protein ZK354.3 protein.
Length = 312
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +1
Query: 379 APRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDE 486
AP+ + KE E + EE+ +DD ++ KD+
Sbjct: 63 APKGEEKKEEEKKEEEKKEEEKKADDEKKKTEEKDD 98
>U23484-16|AAK68297.1| 358|Caenorhabditis elegans Hypothetical
protein EEED8.15 protein.
Length = 358
Score = 28.3 bits (60), Expect = 5.6
Identities = 21/91 (23%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Frame = -1
Query: 449 EGQRELERSSALGSGSFQRSFRGALVHNPPHVARREARVGPVRVHD---HSISRIHSNAL 279
E Q+EL+R + + +G ++R + ++ + P R+ +++ L
Sbjct: 198 ERQKELQRYTPIATG-ICGAWRLSEINKYNETLKTRGVSFPNRLKTLAAYTVYNFDGTYL 256
Query: 278 VRHSEIHCSTLIRGCLQLPT-QMRGYVATST 189
H+++ C T GCL+L T ++ G + ST
Sbjct: 257 KSHNQVFCKTFNSGCLKLGTHEITGGIVVST 287
>AF456248-1|AAL59606.1| 265|Caenorhabditis elegans secreted
2-immunoglobulin-domainprotein ZIG-1 protein.
Length = 265
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 276 NQSVGMNPRNGMIVNANGTDAGLATCD 356
+QSV M ++ NAN TDAG +C+
Sbjct: 177 SQSVSMEGSTVIVTNANYTDAGTYSCE 203
>Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical
protein K08E7.5c protein.
Length = 896
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -2
Query: 175 GCKSRPASCCSRPVPFWLVTL 113
GC+ +P +CC+ P P L T+
Sbjct: 637 GCQPQPQNCCAPPAPCCLPTI 657
>Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical
protein K08E7.5d protein.
Length = 541
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -2
Query: 175 GCKSRPASCCSRPVPFWLVTL 113
GC+ +P +CC+ P P L T+
Sbjct: 282 GCQPQPQNCCAPPAPCCLPTI 302
>Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical
protein K08E7.5b protein.
Length = 493
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -2
Query: 175 GCKSRPASCCSRPVPFWLVTL 113
GC+ +P +CC+ P P L T+
Sbjct: 234 GCQPQPQNCCAPPAPCCLPTI 254
>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical protein
K08E7.5a protein.
Length = 1221
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -2
Query: 175 GCKSRPASCCSRPVPFWLVTL 113
GC+ +P +CC+ P P L T+
Sbjct: 962 GCQPQPQNCCAPPAPCCLPTI 982
>AF003136-10|AAK21378.2| 1281|Caenorhabditis elegans High incidence
of males (increasedx chromosome loss) protein 1, isoform
a protein.
Length = 1281
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = -1
Query: 509 SNGTVQSFSSLRDLVRRTSSEGQRELERSSALGSGSFQRSFRGALVHNPPHVARREARVG 330
S+ V+ + L+D +R S+ QREL + + G + S L H R +A+ G
Sbjct: 378 SDEQVREYGQLKDQAQRESAMVQRELLMAEQVFEGD-KSSLNHELRRQKEHQERVKAKEG 436
Query: 329 PVR 321
VR
Sbjct: 437 DVR 439
>Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical
protein F40F11.2b protein.
Length = 1607
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 63 FLEQSSQKNVPLGSNMSNVTNQNGTGLEQQLAGLDLQPQAPKSTGRYIPPHLRRQLQATS 242
++ Q N P G++ S + +Q G + Q + QP PK+T + PP + QA
Sbjct: 170 YMPQIDHMN-PSGNSSSQINHQQGMIVPQ----VQQQPAKPKTTKKRPPPKKKTAAQAPD 224
Query: 243 DQG 251
G
Sbjct: 225 TVG 227
>Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical
protein F40F11.2a protein.
Length = 1593
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 63 FLEQSSQKNVPLGSNMSNVTNQNGTGLEQQLAGLDLQPQAPKSTGRYIPPHLRRQLQATS 242
++ Q N P G++ S + +Q G + Q + QP PK+T + PP + QA
Sbjct: 156 YMPQIDHMN-PSGNSSSQINHQQGMIVPQ----VQQQPAKPKTTKKRPPPKKKTAAQAPD 210
Query: 243 DQG 251
G
Sbjct: 211 TVG 213
>Z68751-7|CAA92977.2| 319|Caenorhabditis elegans Hypothetical
protein T05E11.6 protein.
Length = 319
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +3
Query: 513 DERQELLLFGTGNTGINFSKYEDIPVEASGDRVPDCITSFEDVNLTEL--IAGQILSLAR 686
D + +L++ TG+ G +F K++D + D T FED E+ IA S +
Sbjct: 144 DHQSNVLIYLTGHGGDSFMKFQDSEELTNVDLAYAIQTMFEDNRYHEMLVIADSCRSASM 203
Query: 687 YD 692
Y+
Sbjct: 204 YE 205
>U37430-4|AAB52675.1| 1616|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 1 protein.
Length = 1616
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -1
Query: 347 REARVGPVRVHDHSISRIHS 288
+EAR G V++ DH IS +HS
Sbjct: 1587 KEARQGTVQLDDHKISFVHS 1606
>L16559-5|AAA27932.2| 365|Caenorhabditis elegans Hypothetical
protein C06E1.7 protein.
Length = 365
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -2
Query: 112 LILLPSGTFFWELCSKNI*NTVYNEFCTNTNSQNHKK 2
LI PS TF W L + VY + +TN N+KK
Sbjct: 301 LITAPSSTFGWWLGYLSKGQAVYYQDIRSTNDVNYKK 337
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,810,443
Number of Sequences: 27780
Number of extensions: 367026
Number of successful extensions: 1254
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1254
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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