Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30880
(800 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 115 5e-26
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 9e-14
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 65 5e-11
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 64 1e-10
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 61 9e-10
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 58 8e-09
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 58 8e-09
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 57 1e-08
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 8e-08
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 54 2e-07
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_59094| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_5372| Best HMM Match : ER_lumen_recept (HMM E-Value=2.5e-19) 42 6e-04
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 37 0.017
SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058) 36 0.038
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.038
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 34 0.12
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 34 0.15
SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 31 0.82
SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05) 31 1.1
SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19) 30 1.9
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 30 2.5
SB_45044| Best HMM Match : Thioredoxin (HMM E-Value=1.1) 28 7.7
SB_38688| Best HMM Match : TP901-1_ORF40 (HMM E-Value=1.7) 28 7.7
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 115 bits (276), Expect = 5e-26
Identities = 49/77 (63%), Positives = 62/77 (80%)
Frame = +1
Query: 262 LKTDDPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMR 441
LK +DPPV LAKVDCTE GK TC ++ VSGYPTLKIFR GE+S +Y+GPR+S+GI++YM+
Sbjct: 584 LKKNDPPVPLAKVDCTEAGKDTCSKYGVSGYPTLKIFRNGEMSKDYDGPRDSSGIIRYMK 643
Query: 442 AQVGPSSKELLTVADFE 492
Q GPSS E+ +V E
Sbjct: 644 KQAGPSSVEIKSVDHLE 660
Score = 65.3 bits (152), Expect = 5e-11
Identities = 27/53 (50%), Positives = 36/53 (67%)
Frame = +2
Query: 98 IIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 256
++++ DVLDL DS+F + ++ D LV F+APWCGHCKRL PEY AA
Sbjct: 529 LLFVGSTLSSDVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEYETAA 581
Score = 50.4 bits (115), Expect = 2e-06
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +1
Query: 298 VDCTEGGKSTCE-QFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKEL 471
+DC G++TC +F + +PTLK+FR G+ +Y GP+++ + Y+ Q+G K L
Sbjct: 434 MDCFGAGRATCYYRFGIHQWPTLKLFRYGQPWGDYTGPQDTASLESYIHDQLGDGKKRL 492
Score = 45.2 bits (102), Expect = 6e-05
Identities = 25/81 (30%), Positives = 42/81 (51%)
Frame = +3
Query: 540 ESDLKGEFLKTADKLREEVTFAHSSANEVLEKNRIQKQCGSCIVPSDSRTSLKTLPVAFD 719
+ DLK F++TA+++R+ +FAH+S +VLEK + Q P T L+ +A+
Sbjct: 678 DDDLKNAFMRTANEMRDSFSFAHASVTDVLEKYNYKNQI-VVFRPKHLHTKLEPSFIAYT 736
Query: 720 GDTEKVFTPKLSSKGTYHGLV 782
G + + K + HG V
Sbjct: 737 GSPDDFYIKKFIN-AKAHGRV 756
Score = 42.7 bits (96), Expect = 3e-04
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +2
Query: 188 LVMFYAPWCGHCKRLKPEY 244
L+ FYAPWCGHCK L+P+Y
Sbjct: 884 LIEFYAPWCGHCKSLEPKY 902
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 74.5 bits (175), Expect = 9e-14
Identities = 37/68 (54%), Positives = 46/68 (67%)
Frame = +1
Query: 262 LKTDDPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMR 441
+K +DPPV AK+D T ++F VSGYPTLKIFRKG EY GPRE +GIV+YM+
Sbjct: 107 MKLNDPPVPFAKMDATVAS-DIAQRFDVSGYPTLKIFRKG-TPYEYEGPREESGIVEYMK 164
Query: 442 AQVGPSSK 465
Q P+ K
Sbjct: 165 KQSDPNWK 172
Score = 74.5 bits (175), Expect = 9e-14
Identities = 37/79 (46%), Positives = 53/79 (67%)
Frame = +1
Query: 262 LKTDDPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMR 441
L+ DPP+ LA VD T + +++ V GYPTLK+FRKG+ ++EY G R+ GI YMR
Sbjct: 222 LQKHDPPIPLAIVDATIESE-LAQKYEVQGYPTLKVFRKGK-ATEYKGQRDQYGIASYMR 279
Query: 442 AQVGPSSKELLTVADFEAF 498
+QVGPSS+ L ++ + F
Sbjct: 280 SQVGPSSRILSSLKAVQDF 298
Score = 60.1 bits (139), Expect = 2e-09
Identities = 25/45 (55%), Positives = 31/45 (68%)
Frame = +2
Query: 122 EEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 256
E+DV L +F V+ +++ LV FYAPWCGHCK L PEYA AA
Sbjct: 60 EDDVSVLNSKNFDRVIEENNIILVEFYAPWCGHCKSLAPEYAKAA 104
Score = 54.4 bits (125), Expect = 1e-07
Identities = 22/41 (53%), Positives = 29/41 (70%)
Frame = +2
Query: 134 LDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 256
L LT +F+ V+++ LV F+APWCGHCK+L PEY AA
Sbjct: 179 LTLTKENFTEVVNRESLMLVEFFAPWCGHCKQLAPEYEKAA 219
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 65.3 bits (152), Expect = 5e-11
Identities = 27/53 (50%), Positives = 36/53 (67%)
Frame = +2
Query: 98 IIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 256
++++ DVLDL DS+F + ++ D LV F+APWCGHCKRL PEY AA
Sbjct: 4 LLFVGSTLSSDVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEYETAA 56
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 64.5 bits (150), Expect = 1e-10
Identities = 32/62 (51%), Positives = 40/62 (64%), Gaps = 4/62 (6%)
Frame = +2
Query: 83 VLLLGIIYLCKAAE----EDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAV 250
VLLL ++ L + E EDVL LT+ +F ++ + LV FYAPWCGHCK L PEYA
Sbjct: 6 VLLLALVSLAYSEEIKEEEDVLVLTEKNFDEAVAANKHVLVEFYAPWCGHCKALAPEYAK 65
Query: 251 AA 256
AA
Sbjct: 66 AA 67
Score = 61.7 bits (143), Expect = 7e-10
Identities = 34/84 (40%), Positives = 49/84 (58%)
Frame = +1
Query: 256 GLLKTDDPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKY 435
G LK++ + LAKVD T K E+F V GYPT+K F+ G+ SEY G R + IV +
Sbjct: 68 GQLKSEKSEIKLAKVDATAETKLG-EKFQVQGYPTIKFFKDGK-PSEYAGGRTAPEIVSW 125
Query: 436 MRAQVGPSSKELLTVADFEAFTSK 507
+ + GP +K+L T + F +K
Sbjct: 126 LNKKTGPPAKDLATADAMKDFITK 149
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +2
Query: 140 LTDSDFSAVLSQHD-TALVMFYAPWCGHCKRLKP 238
L +F V D V FYAPWCGHCK+L P
Sbjct: 389 LCGKNFDEVARNKDKNVFVEFYAPWCGHCKQLAP 422
Score = 33.5 bits (73), Expect = 0.20
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +1
Query: 271 DDPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRA 444
D + +AK+D T + E V +PT+K F K + +YNG R + VK++ +
Sbjct: 433 DHADIVVAKMDSTA---NEVEGVKVHSFPTIKYFPKEGEAVDYNGGRTLDDFVKFLES 487
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 61.3 bits (142), Expect = 9e-10
Identities = 27/46 (58%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
Frame = +2
Query: 122 EEDVLDLTDSDFSA-VLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 256
+EDV++LTD++F VL+ D LV F+APWCGHC+RL PE+A AA
Sbjct: 78 KEDVVELTDTNFEKEVLNSKDLWLVEFFAPWCGHCQRLAPEWAKAA 123
Score = 33.9 bits (74), Expect = 0.15
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Frame = +1
Query: 325 TCEQFSVSGYPTLKIFRKGELSS----EYNGPRESNGIVKY 435
T ++ V GYPT+K+F G +S +Y G R ++ I++Y
Sbjct: 143 TASRYQVQGYPTIKVFAAGIKNSHSVEDYQGGRTASDIIQY 183
Score = 32.7 bits (71), Expect = 0.36
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +1
Query: 337 FSVSGYPTLKIFRKGELS-SEYNGPRESNGIV 429
+++ G+PT+KIF + S +YNG R + GIV
Sbjct: 11 YNIRGFPTIKIFGANKNSPQDYNGQRTAQGIV 42
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 58.0 bits (134), Expect = 8e-09
Identities = 28/50 (56%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Frame = +2
Query: 116 AAEED---VLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 256
+AEED V L SDF L+ + LVMFYAPWCGHCK KP+Y AA
Sbjct: 141 SAEEDSSLVKQLDGSDFWGYLNNTEHVLVMFYAPWCGHCKNAKPKYEKAA 190
Score = 54.4 bits (125), Expect = 1e-07
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = +2
Query: 122 EEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 256
+ V+ LTD + H+ LVM++APWCGHC +KP Y AA
Sbjct: 49 DSKVVFLTDESHDEFIKSHENVLVMYFAPWCGHCNEMKPNYYKAA 93
Score = 49.2 bits (112), Expect = 4e-06
Identities = 23/64 (35%), Positives = 36/64 (56%)
Frame = +1
Query: 271 DDPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQV 450
D P AK+DCT+ G C++ V+GYPTL+ + G+ EY+G R + ++ +M
Sbjct: 195 DQPNRVFAKLDCTKFG-DVCDKEEVNGYPTLRYYLYGKFVVEYDGDRVTEDLISFMEEPP 253
Query: 451 GPSS 462
P S
Sbjct: 254 LPLS 257
Score = 35.9 bits (79), Expect = 0.038
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +1
Query: 286 ALAKVDCTEGGKSTCEQFSVSGYPT 360
ALA VDCTE K+TC Q + GYPT
Sbjct: 19 ALAAVDCTES-KNTCNQRDIKGYPT 42
Score = 34.7 bits (76), Expect = 0.088
Identities = 18/60 (30%), Positives = 35/60 (58%)
Frame = +1
Query: 259 LLKTDDPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYM 438
+L +D LA VDCT+ K ++ +++GYPT+K++ K +++ E + +VK +
Sbjct: 95 VLHDEDANCNLAAVDCTKH-KDVAKKVALAGYPTVKLY-KASNTAKAASAEEDSSLVKQL 152
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 58.0 bits (134), Expect = 8e-09
Identities = 23/43 (53%), Positives = 31/43 (72%)
Frame = +2
Query: 128 DVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 256
+V+ L D F ++++ + LVMFYAPWCGHCK +KPEY AA
Sbjct: 83 EVVHLRDDMFDDFVAKNPSVLVMFYAPWCGHCKAMKPEYVDAA 125
Score = 54.8 bits (126), Expect = 8e-08
Identities = 22/43 (51%), Positives = 29/43 (67%)
Frame = +2
Query: 128 DVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 256
+V L+D+ F + + + LVMFYAPWCGHCK+ KPE AA
Sbjct: 196 EVYHLSDTTFKSFVKKKKHVLVMFYAPWCGHCKKAKPELMSAA 238
Score = 34.7 bits (76), Expect = 0.088
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +2
Query: 188 LVMFYAPWCGHCKRLKPEYAVAA 256
+++ Y CG+CKR KPE+A AA
Sbjct: 3 VIVLYIAGCGYCKRFKPEFAAAA 25
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 128 DVLDLTDSDFSAVLSQHDTALVMFYAP 208
+V LT F L D+ LVMFYAP
Sbjct: 335 NVQHLTQDTFDEALKTFDSILVMFYAP 361
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 57.2 bits (132), Expect = 1e-08
Identities = 26/59 (44%), Positives = 36/59 (61%)
Frame = +2
Query: 68 GSLKFVLLLGIIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEY 244
G++ F L L + + + V+DLT +F V++ ALV FYAPWCGHCK+L P Y
Sbjct: 4 GTVLFKLFL-LFSISSLTQGKVIDLTKDNFDEVVNGEKFALVEFYAPWCGHCKQLAPTY 61
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +1
Query: 268 TDDPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELS-SEYNGPRESNGIVKYMRA 444
T V +AKVD +G + +F V G+PT+K F KG + EYNG R+ N +K++
Sbjct: 69 TQSSDVIIAKVDA-DGDRDLGSRFDVKGFPTIKYFPKGSTTPEEYNGGRDINDFIKFIEE 127
Query: 445 QVG 453
+ G
Sbjct: 128 KTG 130
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 54.8 bits (126), Expect = 8e-08
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +2
Query: 71 SLKFVLLLGIIYLCKAAEED-VLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYA 247
++ FV+ L +I A +E+ + +LTD DF L + LV FYAPWC C L+P+Y
Sbjct: 3 AIAFVVALCVIAPSYARKENPIFELTDQDFDNFLKDKEVMLVDFYAPWCSDCDNLRPKYE 62
Query: 248 VAA 256
AA
Sbjct: 63 KAA 65
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 53.6 bits (123), Expect = 2e-07
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +2
Query: 122 EEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEY 244
E +L+L DS+F + +H LV FYAPWC HCK++ P+Y
Sbjct: 133 EPTLLELDDSNFEPAVQKHKFVLVDFYAPWCFHCKKMAPDY 173
Score = 48.8 bits (111), Expect = 5e-06
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +2
Query: 119 AEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 256
A VL+L D +F+ + +++ LV FYAPWC C+RL P + AA
Sbjct: 49 ASPAVLNLNDQNFNETIKKNEYVLVDFYAPWCSDCQRLSPLFDTAA 94
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +1
Query: 250 SRGLLKTDDPPVALAKVDCTEGG---KSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESN 420
++ LL V LAKVDC+ K TC++++V PT+ +F G+ E+ G +
Sbjct: 177 AKELLILSHNSVRLAKVDCSANNMATKKTCKKYNVKFLPTIYLFHDGKFVEEFEGNNRNK 236
Query: 421 GIVK 432
+K
Sbjct: 237 KSIK 240
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 53.2 bits (122), Expect = 2e-07
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +1
Query: 292 AKVDCTEG-GKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKE 468
AKVDCT+ K C+ F + GYP++K+F+ G+ + +Y G R +V YM + +S++
Sbjct: 75 AKVDCTDPRSKVLCDNFKIEGYPSVKLFKFGKYAGDYIGQRTDAALVNYMESVTSTASQQ 134
Score = 45.6 bits (103), Expect = 5e-05
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +2
Query: 131 VLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 256
V DL +F ++ + D LV FYAPWC HC+ L P+ AA
Sbjct: 22 VYDLNAQNFDQMIREKDIMLVDFYAPWCHHCQELLPQLEGAA 63
>SB_59094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 50.4 bits (115), Expect = 2e-06
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +1
Query: 298 VDCTEGGKSTCE-QFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKEL 471
+DC G++TC +F + +PTLK+FR G+ +Y GP+++ + Y+ Q+G K L
Sbjct: 237 MDCFGAGRATCYYRFGIHQWPTLKLFRYGQPWGDYTGPQDTASLESYIHDQLGDGKKRL 295
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 41.9 bits (94), Expect = 6e-04
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +2
Query: 155 FSAVLSQHDTALVMFYAPWCGHCKRLKPEY 244
F+ VL+ D +V FYAPWCG C R P+Y
Sbjct: 444 FTDVLASEDAWVVDFYAPWCGPCMRFAPKY 473
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 101 IYLCKAAEEDVLDLTDSDF-SAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 256
++ ++ +V L DF S+V S V F+APWC C RL PEY AA
Sbjct: 276 LFAKESVSSNVHALGPEDFPSSVTSPSRPFFVDFFAPWCPPCMRLLPEYRKAA 328
Score = 31.5 bits (68), Expect = 0.82
Identities = 15/81 (18%), Positives = 36/81 (44%)
Frame = +1
Query: 280 PVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPS 459
PV VDCT + C Q+++ YPT ++ + ++ G + I++++ + +
Sbjct: 335 PVGFGTVDCTVHSQ-LCHQYNIRSYPTTILYNNSQ-PHQFIGHHNALDIIEFVEVEYPEA 392
Query: 460 SKELLTVADFEAFTSKVK*WL 522
+ D ++ + W+
Sbjct: 393 FRSAAFTGDIRVPCAQQEDWV 413
>SB_5372| Best HMM Match : ER_lumen_recept (HMM E-Value=2.5e-19)
Length = 229
Score = 41.9 bits (94), Expect = 6e-04
Identities = 19/50 (38%), Positives = 32/50 (64%)
Frame = +1
Query: 283 VALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVK 432
V LA+V+C + C+ +++ YPT+K+FRKG Y GP +++ +VK
Sbjct: 10 VRLARVNCFDW-TDVCQDNNITVYPTIKLFRKGADELIYGGPLDADHLVK 58
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 37.1 bits (82), Expect = 0.017
Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Frame = +2
Query: 131 VLDLTDSDFSAVLSQHDTALVM--FYAPWCGHCKRLKPEYA 247
VL+L DS F+A L+ T LV+ F A WCG CK + P Y+
Sbjct: 11 VLEL-DSQFTAELTNAGTKLVVADFTASWCGPCKSIAPVYS 50
>SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058)
Length = 664
Score = 35.9 bits (79), Expect = 0.038
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Frame = +2
Query: 155 FSAVLSQ--HDTAL--VMFYAPWCGHCKRLKPEYAVAAA 259
F+ VLS H++ L V FYAPWCG +R E+ +AA+
Sbjct: 441 FAKVLSSFLHNSPLNFVFFYAPWCGQSRRAVEEFNIAAS 479
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 35.9 bits (79), Expect = 0.038
Identities = 13/34 (38%), Positives = 25/34 (73%), Gaps = 2/34 (5%)
Frame = +2
Query: 149 SDFSAVLSQHDTALVM--FYAPWCGHCKRLKPEY 244
++F++V++ LV+ FYA WCG C+++KP++
Sbjct: 19 AEFNSVINNTKDKLVVIDFYAEWCGPCRQIKPKF 52
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 34.3 bits (75), Expect = 0.12
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 143 TDSDFSAVLSQHDTALVMFYAPWCGHCKRLKP 238
TDS V++ L++FY PWCG C P
Sbjct: 524 TDSFDDIVINNDQDVLLVFYTPWCGMCINFAP 555
>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
Length = 186
Score = 33.9 bits (74), Expect = 0.15
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +1
Query: 283 VALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRES 417
+ +AKVDCT + C + ++ YPT+K++ G++ Y G R +
Sbjct: 19 LTIAKVDCTSD-VNLCVKQNIRAYPTMKLYYDGDI-KRYTGRRNA 61
Score = 33.5 bits (73), Expect = 0.20
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +1
Query: 343 VSGYPTLKIFRKGELSSEYNGPRESNGIVKYM 438
++GYPTL +F+ G EY+G R+ + + +++
Sbjct: 146 INGYPTLMLFKDGVQKKEYSGNRDLDSLYRFI 177
Score = 31.9 bits (69), Expect = 0.62
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2
Query: 191 VMFYAPWCGHCKRLKP 238
V FYAPWC HC +L P
Sbjct: 111 VKFYAPWCIHCIKLAP 126
>SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 33.5 bits (73), Expect = 0.20
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +1
Query: 343 VSGYPTLKIFRKGELSSEYNGPRESNGIVKYM 438
++GYPTL +F+ G EY+G R+ + + +++
Sbjct: 1 INGYPTLMLFKDGVQKKEYSGNRDLDSLYRFI 32
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 31.5 bits (68), Expect = 0.82
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 152 DFSAVLSQHDTALVMFYAPWCGHCKRLKPEY 244
+F L ++ A + F A WCG C+ + P++
Sbjct: 3 EFDKFLKDNEVAAIDFTATWCGPCRMIGPKF 33
>SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05)
Length = 215
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +2
Query: 143 TDSDFSAVLSQHDT--ALVMFYAPWCGHCKRL 232
T +DF +LS A+V F+APW HC ++
Sbjct: 8 TVTDFDRILSSSSNVLAVVHFFAPWAPHCNQM 39
>SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19)
Length = 335
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/58 (22%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +2
Query: 62 MFGSLKFVLLLGIIYLCKAAE-EDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 232
+F + F+L+ I+ + + +++ T+ + + + FYAPW HC+R+
Sbjct: 4 LFITNTFLLISLTIFTSTSVHCKKIVEFTNENVDEYVDGSKFVFIFFYAPWDDHCQRI 61
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +2
Query: 146 DSDFSAVLSQHDTALVM--FYAPWCGHCKRLKPEY 244
DS FS + + + LV+ F A WCG CK + P +
Sbjct: 16 DSFFSVEIERAGSRLVVIDFTATWCGPCKSIAPVF 50
>SB_45044| Best HMM Match : Thioredoxin (HMM E-Value=1.1)
Length = 213
Score = 28.3 bits (60), Expect = 7.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 188 LVMFYAPWCGHCKRLKPEYA 247
+++ WCG CK L+P++A
Sbjct: 1 MILITKNWCGACKALRPKFA 20
>SB_38688| Best HMM Match : TP901-1_ORF40 (HMM E-Value=1.7)
Length = 576
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 131 VLDLTDSDFSAVLSQHDTALVMFYAPWCGHCK 226
+ D+ D+ S SQ ++++ +AP C CK
Sbjct: 344 IRDVNDTQLSGTTSQDQYSVLLVHAPCCNACK 375
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,103,059
Number of Sequences: 59808
Number of extensions: 520364
Number of successful extensions: 1679
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1672
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2215746665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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