Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30879
(565 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g44120.2 68415.m05488 60S ribosomal protein L7 (RPL7C) 133 7e-32
At2g44120.1 68415.m05487 60S ribosomal protein L7 (RPL7C) 133 7e-32
At2g01250.1 68415.m00037 60S ribosomal protein L7 (RPL7B) 133 7e-32
At3g13580.3 68416.m01710 60S ribosomal protein L7 (RPL7D) simila... 132 1e-31
At3g13580.2 68416.m01709 60S ribosomal protein L7 (RPL7D) simila... 132 1e-31
At3g13580.1 68416.m01708 60S ribosomal protein L7 (RPL7D) simila... 132 1e-31
At1g80750.1 68414.m09474 60S ribosomal protein L7 (RPL7A) simila... 84 7e-17
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 30 1.2
At4g38240.2 68417.m05401 alpha-1,3-mannosyl-glycoprotein beta-1,... 29 1.6
At4g38240.1 68417.m05400 alpha-1,3-mannosyl-glycoprotein beta-1,... 29 1.6
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 29 1.6
At5g50320.1 68418.m06232 radical SAM domain-containing protein /... 29 2.1
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 29 2.1
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 29 2.1
At1g71170.1 68414.m08212 6-phosphogluconate dehydrogenase NAD-bi... 28 3.7
At5g13990.1 68418.m01636 exocyst subunit EXO70 family protein co... 28 5.0
At1g11820.1 68414.m01358 glycosyl hydrolase family 17 protein si... 28 5.0
At5g06740.1 68418.m00762 lectin protein kinase family protein co... 27 6.5
At3g59970.3 68416.m06695 methylenetetrahydrofolate reductase 1 (... 27 6.5
At1g26540.1 68414.m03234 agenet domain-containing protein contai... 27 6.5
At1g24650.1 68414.m03102 leucine-rich repeat family protein / pr... 27 8.7
>At2g44120.2 68415.m05488 60S ribosomal protein L7 (RPL7C)
Length = 247
Score = 133 bits (322), Expect = 7e-32
Identities = 61/95 (64%), Positives = 71/95 (74%)
Frame = +1
Query: 226 GIPQLKECPWLVYKRGFAKLSGQRIPITSNSIVEKRLHKHNIICVEDLIHEIFTVGEKFK 405
G P LK L+YKRG+ KL+ QRI +T NSIV++ L KH IICVEDLIHEI TVG FK
Sbjct: 142 GYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGKHGIICVEDLIHEIMTVGPHFK 201
Query: 406 YASNFLWPFKLNNPTGGWRKKTIHYVDGGDFGNRE 510
A+NFLWPF+L P GG +KK HYV+GGD GNRE
Sbjct: 202 EANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRE 236
Score = 76.6 bits (180), Expect = 1e-14
Identities = 33/48 (68%), Positives = 42/48 (87%)
Frame = +2
Query: 110 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLKSVR 253
+ +K+LQL RLRQI NGVF+++NKATVNMLR EPY+ +GYPNLKSV+
Sbjct: 103 KTKKILQLLRLRQIFNGVFLKVNKATVNMLRRVEPYVTYGYPNLKSVK 150
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/44 (54%), Positives = 31/44 (70%)
Frame = +3
Query: 6 IRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCL 137
IRL R+A+ +G +YV EAKL F+IRIRGIN + PK+ K L
Sbjct: 68 IRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLL 111
>At2g44120.1 68415.m05487 60S ribosomal protein L7 (RPL7C)
Length = 242
Score = 133 bits (322), Expect = 7e-32
Identities = 61/95 (64%), Positives = 71/95 (74%)
Frame = +1
Query: 226 GIPQLKECPWLVYKRGFAKLSGQRIPITSNSIVEKRLHKHNIICVEDLIHEIFTVGEKFK 405
G P LK L+YKRG+ KL+ QRI +T NSIV++ L KH IICVEDLIHEI TVG FK
Sbjct: 137 GYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGKHGIICVEDLIHEIMTVGPHFK 196
Query: 406 YASNFLWPFKLNNPTGGWRKKTIHYVDGGDFGNRE 510
A+NFLWPF+L P GG +KK HYV+GGD GNRE
Sbjct: 197 EANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRE 231
Score = 76.6 bits (180), Expect = 1e-14
Identities = 33/48 (68%), Positives = 42/48 (87%)
Frame = +2
Query: 110 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLKSVR 253
+ +K+LQL RLRQI NGVF+++NKATVNMLR EPY+ +GYPNLKSV+
Sbjct: 98 KTKKILQLLRLRQIFNGVFLKVNKATVNMLRRVEPYVTYGYPNLKSVK 145
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/44 (54%), Positives = 31/44 (70%)
Frame = +3
Query: 6 IRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCL 137
IRL R+A+ +G +YV EAKL F+IRIRGIN + PK+ K L
Sbjct: 63 IRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLL 106
>At2g01250.1 68415.m00037 60S ribosomal protein L7 (RPL7B)
Length = 242
Score = 133 bits (322), Expect = 7e-32
Identities = 61/95 (64%), Positives = 70/95 (73%)
Frame = +1
Query: 226 GIPQLKECPWLVYKRGFAKLSGQRIPITSNSIVEKRLHKHNIICVEDLIHEIFTVGEKFK 405
G P LK L+YKRG+ KL+ QRI +T NSIVE+ L KH IIC EDLIHEI TVG FK
Sbjct: 137 GFPNLKSVKELIYKRGYGKLNHQRIALTDNSIVEQALGKHGIICTEDLIHEILTVGPHFK 196
Query: 406 YASNFLWPFKLNNPTGGWRKKTIHYVDGGDFGNRE 510
A+NFLWPF+L P GG +KK HYV+GGD GNRE
Sbjct: 197 EANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRE 231
Score = 73.7 bits (173), Expect = 8e-14
Identities = 31/48 (64%), Positives = 42/48 (87%)
Frame = +2
Query: 110 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLKSVR 253
+ +K+LQL RLRQI NGVF+++NKAT+NMLR EPY+ +G+PNLKSV+
Sbjct: 98 KTKKILQLLRLRQIFNGVFLKVNKATMNMLRRVEPYVTYGFPNLKSVK 145
Score = 50.4 bits (115), Expect = 8e-07
Identities = 23/44 (52%), Positives = 30/44 (68%)
Frame = +3
Query: 6 IRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCL 137
I L R+A+ +G +YV EAKL F+IRIRGIN + PK+ K L
Sbjct: 63 ISLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLL 106
>At3g13580.3 68416.m01710 60S ribosomal protein L7 (RPL7D) similar
to 60S ribosomal protein L7 GB:AAD14525 GI:4262232 from
[Arabidopsis thaliana]
Length = 244
Score = 132 bits (320), Expect = 1e-31
Identities = 61/95 (64%), Positives = 70/95 (73%)
Frame = +1
Query: 226 GIPQLKECPWLVYKRGFAKLSGQRIPITSNSIVEKRLHKHNIICVEDLIHEIFTVGEKFK 405
G P LK L+YKRGF KL+ QR +T NSIV++ L KH IICVEDLIHEI TVG FK
Sbjct: 139 GYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGIICVEDLIHEIMTVGPHFK 198
Query: 406 YASNFLWPFKLNNPTGGWRKKTIHYVDGGDFGNRE 510
A+NFLWPF+L P GG +KK HYV+GGD GNRE
Sbjct: 199 EANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRE 233
Score = 76.2 bits (179), Expect = 1e-14
Identities = 32/48 (66%), Positives = 42/48 (87%)
Frame = +2
Query: 110 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLKSVR 253
+ +K+LQL RLRQI NGVF+++NKAT+NMLR EPY+ +GYPNLKSV+
Sbjct: 100 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVTYGYPNLKSVK 147
Score = 51.2 bits (117), Expect = 5e-07
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = +3
Query: 6 IRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCL 137
I+L R+A+ +G +YV EAKL F+IRIRGIN + PK+ K L
Sbjct: 65 IQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLL 108
>At3g13580.2 68416.m01709 60S ribosomal protein L7 (RPL7D) similar
to 60S ribosomal protein L7 GB:AAD14525 GI:4262232 from
[Arabidopsis thaliana]
Length = 244
Score = 132 bits (320), Expect = 1e-31
Identities = 61/95 (64%), Positives = 70/95 (73%)
Frame = +1
Query: 226 GIPQLKECPWLVYKRGFAKLSGQRIPITSNSIVEKRLHKHNIICVEDLIHEIFTVGEKFK 405
G P LK L+YKRGF KL+ QR +T NSIV++ L KH IICVEDLIHEI TVG FK
Sbjct: 139 GYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGIICVEDLIHEIMTVGPHFK 198
Query: 406 YASNFLWPFKLNNPTGGWRKKTIHYVDGGDFGNRE 510
A+NFLWPF+L P GG +KK HYV+GGD GNRE
Sbjct: 199 EANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRE 233
Score = 76.2 bits (179), Expect = 1e-14
Identities = 32/48 (66%), Positives = 42/48 (87%)
Frame = +2
Query: 110 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLKSVR 253
+ +K+LQL RLRQI NGVF+++NKAT+NMLR EPY+ +GYPNLKSV+
Sbjct: 100 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVTYGYPNLKSVK 147
Score = 51.2 bits (117), Expect = 5e-07
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = +3
Query: 6 IRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCL 137
I+L R+A+ +G +YV EAKL F+IRIRGIN + PK+ K L
Sbjct: 65 IQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLL 108
>At3g13580.1 68416.m01708 60S ribosomal protein L7 (RPL7D) similar
to 60S ribosomal protein L7 GB:AAD14525 GI:4262232 from
[Arabidopsis thaliana]
Length = 244
Score = 132 bits (320), Expect = 1e-31
Identities = 61/95 (64%), Positives = 70/95 (73%)
Frame = +1
Query: 226 GIPQLKECPWLVYKRGFAKLSGQRIPITSNSIVEKRLHKHNIICVEDLIHEIFTVGEKFK 405
G P LK L+YKRGF KL+ QR +T NSIV++ L KH IICVEDLIHEI TVG FK
Sbjct: 139 GYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGIICVEDLIHEIMTVGPHFK 198
Query: 406 YASNFLWPFKLNNPTGGWRKKTIHYVDGGDFGNRE 510
A+NFLWPF+L P GG +KK HYV+GGD GNRE
Sbjct: 199 EANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRE 233
Score = 76.2 bits (179), Expect = 1e-14
Identities = 32/48 (66%), Positives = 42/48 (87%)
Frame = +2
Query: 110 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLKSVR 253
+ +K+LQL RLRQI NGVF+++NKAT+NMLR EPY+ +GYPNLKSV+
Sbjct: 100 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVTYGYPNLKSVK 147
Score = 51.2 bits (117), Expect = 5e-07
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = +3
Query: 6 IRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCL 137
I+L R+A+ +G +YV EAKL F+IRIRGIN + PK+ K L
Sbjct: 65 IQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLL 108
>At1g80750.1 68414.m09474 60S ribosomal protein L7 (RPL7A) similar
to ribosomal protein L7 GB:AAA03081 GI:307388 from [Homo
sapiens]
Length = 247
Score = 83.8 bits (198), Expect = 7e-17
Identities = 41/99 (41%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Frame = +1
Query: 226 GIPQLKECPWLVYKRGFAKLSGQRIPITSNSIVEKRLHKHNIICVEDLIHEIFTVGEKFK 405
G P K L+YK+G + G +P+T N+I+E+ L +H I+ +EDL++EI VG+ F+
Sbjct: 141 GYPNDKSVKDLIYKKGCTIIEGNPVPLTDNNIIEQALGEHKILGIEDLVNEIARVGDHFR 200
Query: 406 YASNFLWPFKLNNPTGG--WRKKTIHYVDGGDFGNRETR 516
FL P KLN P RKK + + +GGD GNRE +
Sbjct: 201 EVMRFLGPLKLNKPVADVLHRKKQV-FSEGGDTGNREDK 238
Score = 39.1 bits (87), Expect = 0.002
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +2
Query: 110 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLKSVR 253
+ +++L +L+ + GVF + + L +PY+ +GYPN KSV+
Sbjct: 102 KTKRILNNLQLKSVFTGVFAKATDSLFQKLLKVQPYVTYGYPNDKSVK 149
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +3
Query: 6 IRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCL 137
IR+ ++ + + P ++ L F+IRI+G N + PK+ + N L
Sbjct: 67 IRMKQRVKRPKSSPPPVKSDLVFIIRIQGKNDMHPKTKRILNNL 110
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 WD-40
repeats (PF00400) (2 weak)
Length = 1108
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -3
Query: 434 LKGHRKLLAYLNFSPTVKISWMRSSTQIMLCLWSLFSTMLLEVIGIRCPLSLA 276
LKGH+K + L FS + I + S +C WS+ + + + I+ P A
Sbjct: 900 LKGHQKRITGLAFSTALNI-LVSSGADAQICFWSIDTWEKRKSVAIQMPAGKA 951
>At4g38240.2 68417.m05401 alpha-1,3-mannosyl-glycoprotein
beta-1,2-N-acetylglucosaminyltransferase, putative
similar to N-acetylglucosaminyltransferase I from
Arabidopsis thaliana [gi:5139335]; contains AT-AC
non-consensus splice sites at intron 13
Length = 444
Score = 29.5 bits (63), Expect = 1.6
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 403 KYASNFLWPFKLNNPTGGWRKKTIHYVDGGDF 498
++ S +L P KLN+ T W+ K + Y+ G++
Sbjct: 321 QFFSQYLEPIKLNDVTVDWKAKDLGYLTEGNY 352
>At4g38240.1 68417.m05400 alpha-1,3-mannosyl-glycoprotein
beta-1,2-N-acetylglucosaminyltransferase, putative
similar to N-acetylglucosaminyltransferase I from
Arabidopsis thaliana [gi:5139335]; contains AT-AC
non-consensus splice sites at intron 13
Length = 444
Score = 29.5 bits (63), Expect = 1.6
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 403 KYASNFLWPFKLNNPTGGWRKKTIHYVDGGDF 498
++ S +L P KLN+ T W+ K + Y+ G++
Sbjct: 321 QFFSQYLEPIKLNDVTVDWKAKDLGYLTEGNY 352
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -3
Query: 464 LRQPPVGLFNLKGHRKLLAYLNFSPTVKISWMRSSTQIMLCLWSL 330
LR P + L + GH K ++Y+ F + + + SST L LW L
Sbjct: 690 LRNPKIPLCTMIGHSKTVSYVKFVDSSTL--VSSSTDNTLKLWDL 732
>At5g50320.1 68418.m06232 radical SAM domain-containing protein /
GCN5-related N-acetyltransferase (GNAT) family protein
contains Pfam profiles PF00583: acetyltransferase, GNAT
family, PF04055: Radical SAM superfamily
Length = 565
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/24 (54%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Frame = -3
Query: 548 YLNHPPEKIVDLVSR-LPKSPPST 480
Y N+PPE++VD+V+R L PP T
Sbjct: 355 YRNYPPEQLVDIVARILSMVPPWT 378
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -3
Query: 464 LRQPPVGLFNLKGHRKLLAYLNFSPTVKISWMRSSTQIMLCLWSL 330
LR P + L + GH K ++Y+ F + + + SST L LW L
Sbjct: 648 LRNPKLPLCTMIGHHKTVSYVRFVDSSTL--VSSSTDNTLKLWDL 690
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -3
Query: 464 LRQPPVGLFNLKGHRKLLAYLNFSPTVKISWMRSSTQIMLCLWSL 330
LR P + L + GH K ++Y+ F + + + SST L LW L
Sbjct: 648 LRNPKLPLCTMIGHHKTVSYVRFVDSSTL--VSSSTDNTLKLWDL 690
>At1g71170.1 68414.m08212 6-phosphogluconate dehydrogenase
NAD-binding domain-containing protein contains Pfam
profile: PF03446 NAD binding domain of
6-phosphogluconate
Length = 299
Score = 28.3 bits (60), Expect = 3.7
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 481 VDGGDFGNRETRSTIFSGG 537
V GGD G RE + TIF+GG
Sbjct: 133 VSGGDAGAREGKLTIFAGG 151
>At5g13990.1 68418.m01636 exocyst subunit EXO70 family protein
contains Pfam domain PF03081: Exo70 exocyst complex
subunit;
Length = 695
Score = 27.9 bits (59), Expect = 5.0
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -2
Query: 459 PTTSWIVQFEGPQEITRVLELFSNSEDLMDEVLNTDNVV-FMEPLLNNA 316
P T W ++ P+E++ +LE LM +LNT + + E L+N+A
Sbjct: 136 PKTVW---YQDPEEVSSLLEAVDRVSKLMGLLLNTKSCLDHHESLINHA 181
>At1g11820.1 68414.m01358 glycosyl hydrolase family 17 protein
similar to elicitor inducible chitinase Nt-SubE76
GI:11071974 from [Nicotiana tabacum]
Length = 511
Score = 27.9 bits (59), Expect = 5.0
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = -2
Query: 483 DIMNGLLAPTTSWIVQFEGPQEITRVLELFSNSEDLMDEVLNTDNVVFMEPLLNN--AVG 310
D+ N LL+PT +V+F Q++ V L+ +L+ + T V + N A+G
Sbjct: 51 DVSN-LLSPTE--LVKFLQAQKVNHV-RLYDADPELLKALAKTKVRVIISVPNNQLLAIG 106
Query: 309 SDWYTLSTQLGESTFVY*PRTL 244
S T ++ +G + Y P TL
Sbjct: 107 SSNSTAASWIGRNVVAYYPETL 128
>At5g06740.1 68418.m00762 lectin protein kinase family protein
contains Legume lectins beta-chain signature,
PROSITE:PS00307 and Serine/Threonine protein kinases
active-site signature, PROSITE:PS00108
Length = 652
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 65 IGICHPNPWYQPSFTEVRKVL 127
+ CHPNP +PS V KVL
Sbjct: 586 LACCHPNPNQRPSMKTVLKVL 606
>At3g59970.3 68416.m06695 methylenetetrahydrofolate reductase 1
(MTHFR1) identical to methylenetetrahydrofolate
reductase MTHFR1 [Arabidopsis thaliana] GI:5911425
Length = 592
Score = 27.5 bits (58), Expect = 6.5
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 65 IGICHPNPWYQPSFTEVRKVLQLFRLRQINNGVFVRLN-KATVNMLRIAEPYIAWGYP 235
IG +PW + + + +L +IN+ F+ +N + +VN + P I WG P
Sbjct: 403 IGNLKSSPWSELDGLQPETKIINEQLGKINSNGFLTINSQPSVNAAKSDSPAIGWGGP 460
>At1g26540.1 68414.m03234 agenet domain-containing protein contains
Pfam PF05641: Agenet domain
Length = 695
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -1
Query: 142 QSKQLQNFTDF-GETWLIPRIRMTNANLASPGT 47
+ KQL+ + G TW+ P I +N ++ SPGT
Sbjct: 126 ERKQLRTHLIWTGGTWIQPEIEESNKSMFSPGT 158
>At1g24650.1 68414.m03102 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 886
Score = 27.1 bits (57), Expect = 8.7
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 370 IHEIFTVGEKFKYASNFLWPFKLNNPTGGW 459
++ + ++ E F Y NF +K N+P GW
Sbjct: 327 VNTLLSIVEAFGYPVNFAEKWKGNDPCSGW 356
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,574,576
Number of Sequences: 28952
Number of extensions: 301700
Number of successful extensions: 837
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1082538160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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