Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30876
         (737 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.        24   4.3  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   5.6  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   9.8  

>DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.
          Length = 418

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +3

Query: 138 QLPFTRVSLGSALRRCLQR*LVFVAANNTITLKLVSSSELLNQKVNALSQ 287
           +LP   ++  S+LR CLQ+  V     +   L L+S       KV+ + Q
Sbjct: 308 ELPRFTMTYSSSLRECLQQLGVSRVFTDQAELPLISRGRTTPLKVSTILQ 357


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = +1

Query: 358  PTNLTTVTSLGSLEFAVPKTALQCSKFVLLYPI---LFVTASVFT 483
            P N+T V +  ++     +   + SKFV+  P+   L    S+FT
Sbjct: 1163 PANVTMVRASNTISLVTVRHVNETSKFVVFRPVDSFLLKMTSLFT 1207


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 122  PPATAATTIYKSIPGQRPTSMSPAI 196
            PP TA  + +KS PG R +   PA+
Sbjct: 1207 PPGTAPNSFHKSSPG-RGSWPGPAV 1230


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 705,831
Number of Sequences: 2352
Number of extensions: 14398
Number of successful extensions: 32
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)