Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30875
         (714 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    23   3.3  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    22   4.3  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    22   5.7  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   7.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.5  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   7.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.9  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   9.9  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   9.9  

>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = -3

Query: 622 QHPSAGHGESTPRKPQHFTCPTTTTSNQ 539
           Q PS+      PR P+    P T  S Q
Sbjct: 283 QSPSSTSSSPEPRSPESLFKPVTVISRQ 310


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 601 GESTPRKPQHFTCPTTTTSN 542
           G STP  P+H+    T  +N
Sbjct: 100 GSSTPESPEHYYNQKTLQAN 119


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 12/43 (27%), Positives = 18/43 (41%)
 Frame = -3

Query: 694 SLGLVVHPFSLFFQGSRLEETNQPQHPSAGHGESTPRKPQHFT 566
           SLGL      ++FQ  R +E  Q +       + +P    H T
Sbjct: 192 SLGLSERQVKIWFQNRRAKERKQVKKREEVTQKDSPMNMGHLT 234


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 466 SNHRNVDI*SFSNGLMVLCRVQYNQETRFT 377
           S  RN++  SF   L++LC +       FT
Sbjct: 268 SKSRNIEGVSFGTNLVILCALWITTLLLFT 297


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = +2

Query: 587 WCAFPVTSAGMLWLICFF 640
           +CAF + +  +L+L+C +
Sbjct: 150 YCAFIIFTVHLLFLLCIY 167


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 227 YDSTSSQNKFFPG 189
           +DS S QN  FPG
Sbjct: 740 FDSRSRQNSSFPG 752


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -2

Query: 650 FTVRRNKSTTTSQRWSRGKHTTKASTLHVPNNHH 549
           F  RR K+   SQR +  +     +  +  N+HH
Sbjct: 291 FQNRRMKNKKNSQRQAAQQQNNNNAATNNQNHHH 324


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = +2

Query: 455  PVIALCNTDSPLRFVDIASHATPSLPTLLV*CGGCW 562
            P  A C+  S +  VDI + A P+  T  V     W
Sbjct: 1323 PEKATCDGTSNVNVVDIVTTAKPAQSTTSVSTTTSW 1358


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -3

Query: 106 PRWVVAASILVTSSSLRASTSNPPDIV 26
           P+W  A   L  SSS + S    P IV
Sbjct: 79  PQWPFAWGSLXRSSSPQTSAPTGPPIV 105


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/21 (38%), Positives = 9/21 (42%)
 Frame = +2

Query: 71  CHQNACCNHPSWGRKC*LPDG 133
           CH N  C     G +C  P G
Sbjct: 269 CHNNGTCLDKVGGFECKCPPG 289


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,572
Number of Sequences: 336
Number of extensions: 4881
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)