Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30873
         (774 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    24   1.8  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   5.5  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   5.5  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    22   7.3  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    22   7.3  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   9.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   9.6  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 496 GVQPVQGRYQLPATHRGARRRLGQG 570
           GVQ VQG   +P   +G ++  GQG
Sbjct: 864 GVQGVQGVQGVPGLLQGVQQVFGQG 888


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = +3

Query: 678 VHWVTSGEGMGGRENFFRKPVKD 746
           + W   GE MGG      K V D
Sbjct: 616 IRWSYPGEEMGGSSGVLAKKVAD 638


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 408 MLYRGDVVPKDVNAAIAT 461
           M+Y G  V  D+NA IAT
Sbjct: 319 MMYLGTPVMPDLNALIAT 336


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = +1

Query: 721 ISSESPLRTLACPSEGL 771
           I+S+SPL + ACP +GL
Sbjct: 53  INSKSPLLSCACP-DGL 68


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = +1

Query: 721 ISSESPLRTLACPSEGL 771
           I+S+SPL + ACP +GL
Sbjct: 53  INSKSPLLSCACP-DGL 68


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +2

Query: 215 SPSSRLTWCLTPVSLPT 265
           +P+ ++TW L   +LPT
Sbjct: 448 NPTPQVTWALDGFALPT 464


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +2

Query: 215 SPSSRLTWCLTPVSLPT 265
           +P+ ++TW L   +LPT
Sbjct: 448 NPTPQVTWALDGFALPT 464


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,619
Number of Sequences: 438
Number of extensions: 5048
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)