Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30871
(729 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC57A10.02 |cdr2||GIN4 family protein kinase Cdr2|Schizosaccha... 30 0.29
SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces pom... 28 1.6
SPBC337.03 |||conserved eukaryotic protein|Schizosaccharomyces p... 27 2.1
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 27 2.7
SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces... 27 3.6
SPCC1739.10 |mug33||conserved fungal protein|Schizosaccharomyces... 26 6.3
SPAC1751.01c |gti1||gluconate transporter inducer Gti1|Schizosac... 25 8.4
SPBC1709.08 |cft1||cleavage factor one Cft1 |Schizosaccharomyces... 25 8.4
SPBC1347.06c |cki1||serine/threonine protein kinase Cki1|Schizos... 25 8.4
SPAC6B12.11 |drc1|sld1|DNA replication protein Drc1|Schizosaccha... 25 8.4
SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl... 25 8.4
>SPAC57A10.02 |cdr2||GIN4 family protein kinase
Cdr2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 30.3 bits (65), Expect = 0.29
Identities = 26/70 (37%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
Frame = +2
Query: 2 PLMP-SVTNG-----ESSMCESRYRSP--VSPATNPFSINDFEFEPWASSLLGEMSNEDS 157
P +P SVT G +SSM S YR P +SP SIND E + + +MSN+
Sbjct: 425 PQLPKSVTPGLAYPHDSSMLSSNYRPPSALSPRNFNVSINDPEVQLSRRATSLDMSNDFR 484
Query: 158 KEPKDGSVEG 187
D S+ G
Sbjct: 485 MNENDPSIVG 494
>SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1562
Score = 27.9 bits (59), Expect = 1.6
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 152 DSKEPKDGSVEGPPSTPLTPRAPSTPGES 238
D +EP+ S E PP P +P +PS+P S
Sbjct: 360 DEREPERTS-EDPPQLPPSPSSPSSPALS 387
>SPBC337.03 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 387
Score = 27.5 bits (58), Expect = 2.1
Identities = 16/65 (24%), Positives = 27/65 (41%)
Frame = +2
Query: 8 MPSVTNGESSMCESRYRSPVSPATNPFSINDFEFEPWASSLLGEMSNEDSKEPKDGSVEG 187
+P +N + E PA+ P+S + E + S E E + P+D + G
Sbjct: 309 VPYTSNIVENPSEDNLSPLPPPASGPYSQEEEETSLFKSQRKEENEEESKELPEDSDIYG 368
Query: 188 PPSTP 202
S+P
Sbjct: 369 KDSSP 373
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 27.1 bits (57), Expect = 2.7
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 164 PKDGSVEGPPSTPLTPRAPSTP 229
P+ SV PP P+ P APS P
Sbjct: 584 PEVPSVPQPPVAPVVPEAPSVP 605
>SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 711
Score = 26.6 bits (56), Expect = 3.6
Identities = 24/76 (31%), Positives = 30/76 (39%), Gaps = 4/76 (5%)
Frame = +2
Query: 14 SVTNGESSMCESRYRSPVSPATNPF--SINDFEFEPWASSLLGEMSNEDSKEPKDGSVEG 187
S T C+S Y SP+SP + F + F P S S D E K+ + G
Sbjct: 216 SPTASSVRSCQSIYGSPLSPPNSAFQAEMPYFPISPAISCASSCPSTPD--EQKNFFIVG 273
Query: 188 --PPSTPLTPRAPSTP 229
P TP P S P
Sbjct: 274 NAPQQTPARPSLRSVP 289
>SPCC1739.10 |mug33||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 336
Score = 25.8 bits (54), Expect = 6.3
Identities = 11/22 (50%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +2
Query: 44 ESRYRSPVS-PATNPFSINDFE 106
E+ ++ P S PA NP+SIND +
Sbjct: 300 ENPFKDPASAPAPNPWSINDVQ 321
>SPAC1751.01c |gti1||gluconate transporter inducer
Gti1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 25.4 bits (53), Expect = 8.4
Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 6/66 (9%)
Frame = +2
Query: 59 SPVSPATNPFSINDFEFEPWASS------LLGEMSNEDSKEPKDGSVEGPPSTPLTPRAP 220
SP SP T+ + F P SS + + S + S S P+ PRAP
Sbjct: 179 SPTSPTTSAAFPSSFSSLPLVSSKPTGTPFVPKSPPSSSPSTTNVSNASTSSAPINPRAP 238
Query: 221 STPGES 238
T ES
Sbjct: 239 QTRRES 244
>SPBC1709.08 |cft1||cleavage factor one Cft1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1441
Score = 25.4 bits (53), Expect = 8.4
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -2
Query: 380 VASSSSCFNKSFRIRLFELEFASEDELGFLL-NSVRNRFGSS 258
+ S++ +K + LFE+E +DE F L +S++N F +S
Sbjct: 25 LVSNNLVVSKVNSLHLFEIEKIQKDESSFPLDDSLQNEFSTS 66
>SPBC1347.06c |cki1||serine/threonine protein kinase
Cki1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 25.4 bits (53), Expect = 8.4
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 95 NDFEFEPWASSLLGEMSNEDSKEPKDGSVEGPPS-TPLTPRAPSTPG 232
+D+E +P+A L S DS EP S+ PP+ T T P G
Sbjct: 348 SDYE-KPFAEPHLNSAS--DSAEPNQNSLPNPPTETKATTTVPDRSG 391
>SPAC6B12.11 |drc1|sld1|DNA replication protein
Drc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 337
Score = 25.4 bits (53), Expect = 8.4
Identities = 18/73 (24%), Positives = 31/73 (42%)
Frame = +2
Query: 44 ESRYRSPVSPATNPFSINDFEFEPWASSLLGEMSNEDSKEPKDGSVEGPPSTPLTPRAPS 223
E + S ++P + DF+F+ +NE K P++ ++ P T
Sbjct: 52 ELKRESSITPKKAKTKV-DFKFQTPTKQRAETEANESPKAPRNDYLQVTPKTVDKSLLGP 110
Query: 224 TPGESAHVVQLLK 262
TP S V+ LL+
Sbjct: 111 TPQLSRRVLNLLE 123
>SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 25.4 bits (53), Expect = 8.4
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -3
Query: 724 VNPPGPFAVRQQLGRGAR 671
++P P VRQ++GRG R
Sbjct: 478 LHPRNPICVRQRIGRGGR 495
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,496,782
Number of Sequences: 5004
Number of extensions: 46943
Number of successful extensions: 189
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 188
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 343230174
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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