Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30869
(757 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 256 1e-68
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 252 2e-67
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 242 2e-64
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 162 3e-40
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 112 3e-25
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 112 3e-25
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 110 1e-24
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 108 4e-24
03_01_0034 + 318432-318825,318902-319851 108 4e-24
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 107 9e-24
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 94 1e-19
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 90 2e-18
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 89 3e-18
04_01_0383 + 5085697-5085724,5085816-5085927,5087249-5087285,508... 31 1.3
01_01_0524 - 3845637-3845727,3845803-3845896,3846415-3846497,384... 30 1.7
07_03_0483 - 18605176-18606118,18606353-18606482,18606609-18606738 29 3.0
05_07_0299 - 29073900-29073984,29074125-29074158,29074269-290743... 29 3.0
12_02_0674 - 21745321-21746223,21746229-21747608 29 4.0
08_01_0312 + 2764744-2767390,2767632-2767990 29 4.0
10_08_0420 - 17788170-17788178,17788239-17789174 28 7.0
02_05_1147 - 34447519-34448042,34448126-34449092,34449458-344496... 28 7.0
01_05_0685 + 24273331-24273569,24275429-24275465,24275739-242758... 28 7.0
05_01_0140 - 931039-931146,932659-932875,933117-933484,933644-93... 28 9.2
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 256 bits (627), Expect = 1e-68
Identities = 117/173 (67%), Positives = 134/173 (77%)
Frame = +2
Query: 2 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 181
IS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGKHVPR
Sbjct: 5 ISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPR 64
Query: 182 AVFVDLEPTVVDEVRTGTYRQLFHQNNLLLVRKMRXXXXXXXXXXLAKEIVDLVLDRIRK 361
AVFVDLEPTV+DEVRTG YRQLFH L+ ++ + KEIVDL LDRIRK
Sbjct: 65 AVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRK 124
Query: 362 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGNQSKLEFAI*PAPHV 520
LAD CTGLQGFL+F+ LL+ERLSVDYG +SKL F + P+P V
Sbjct: 125 LADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQV 177
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 252 bits (618), Expect = 2e-67
Identities = 115/173 (66%), Positives = 134/173 (77%)
Frame = +2
Query: 2 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 181
IS+H+GQAG+Q+GNACWELYCLEHGIQ DGQMP+D+T+GGGDD+FNTFFSETGAGKHVPR
Sbjct: 5 ISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGKHVPR 64
Query: 182 AVFVDLEPTVVDEVRTGTYRQLFHQNNLLLVRKMRXXXXXXXXXXLAKEIVDLVLDRIRK 361
AVFVDLEPTV+DEVRTG YRQLFH L+ ++ + KEIVDL LDRIRK
Sbjct: 65 AVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLCLDRIRK 124
Query: 362 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGNQSKLEFAI*PAPHV 520
LAD CTGLQGFL+F+ LL+ERLSVDYG +SKL F + P+P V
Sbjct: 125 LADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQV 177
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 242 bits (593), Expect = 2e-64
Identities = 110/173 (63%), Positives = 131/173 (75%)
Frame = +2
Query: 2 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 181
IS+H+GQAG+Q+GNACWELYCLEHGI+PDG MP+D T+G D+FNTFFSETGAGKHVPR
Sbjct: 5 ISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGKHVPR 64
Query: 182 AVFVDLEPTVVDEVRTGTYRQLFHQNNLLLVRKMRXXXXXXXXXXLAKEIVDLVLDRIRK 361
A+FVDLEPTV+DEVRTG+YRQLFH L+ ++ + KEIVDL LDR+RK
Sbjct: 65 AIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRK 124
Query: 362 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGNQSKLEFAI*PAPHV 520
LAD CTGLQGFL+F+ LL+ERLSVDYG +SKL F I P+P V
Sbjct: 125 LADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQV 177
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 162 bits (393), Expect = 3e-40
Identities = 78/141 (55%), Positives = 96/141 (68%)
Frame = +2
Query: 101 TDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHQNNLLLVRK 280
+D T G D+FNTFFSET +GKHVPRA+FVDLEPTV+DEV+TG YRQLFH L+ ++
Sbjct: 98 SDTTPGIARDAFNTFFSETSSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKE 157
Query: 281 MRXXXXXXXXXXLAKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERL 460
+ +E+VDL LDR+RKLAD CTGLQGFL+F+ LL+ERL
Sbjct: 158 DAANNFARGHYTVGREVVDLCLDRLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERL 217
Query: 461 SVDYGNQSKLEFAI*PAPHVF 523
SVDYG +SKL F I P+P F
Sbjct: 218 SVDYGRKSKLGFTIYPSPQYF 238
Score = 75.8 bits (178), Expect = 4e-14
Identities = 28/35 (80%), Positives = 33/35 (94%)
Frame = +2
Query: 2 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 106
IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP D
Sbjct: 5 ISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRD 39
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 112 bits (270), Expect = 3e-25
Identities = 60/176 (34%), Positives = 91/176 (51%), Gaps = 3/176 (1%)
Frame = +2
Query: 2 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETGAGKH 172
+ + GQ G QIG+ WE+ C EHGI P G+ +G D + N +++E G+
Sbjct: 5 LHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRY-----VGTSDLQLERVNVYYNEASCGRF 59
Query: 173 VPRAVFVDLEPTVVDEVRTGTYRQLFHQNNLLLVRKMRXXXXXXXXXXLAKEIVDLVLDR 352
VPRAV +DLEP +D VRTG Y Q+F +N + + E++D VLD
Sbjct: 60 VPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 353 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGNQSKLEFAI*PAPHV 520
+RK A+ C LQGF + H LL+ ++ +Y ++ L F++ P+P V
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKV 175
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 112 bits (269), Expect = 3e-25
Identities = 58/173 (33%), Positives = 89/173 (51%)
Frame = +2
Query: 2 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 181
+ + GQ G QIG+ WE+ C EHGI P G+ + + N +++E G+ VPR
Sbjct: 185 LHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQL--ERVNVYYNEASCGRFVPR 242
Query: 182 AVFVDLEPTVVDEVRTGTYRQLFHQNNLLLVRKMRXXXXXXXXXXLAKEIVDLVLDRIRK 361
AV +DLEP +D VRTG Y Q+F +N + + E++D VLD +RK
Sbjct: 243 AVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 302
Query: 362 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGNQSKLEFAI*PAPHV 520
A+ C LQGF + H LL+ ++ +Y ++ L F++ P+P V
Sbjct: 303 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKV 355
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 110 bits (264), Expect = 1e-24
Identities = 57/173 (32%), Positives = 89/173 (51%)
Frame = +2
Query: 2 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 181
+ + GQ G QIG WE+ C EHGI G+ D + + N +++E G++VPR
Sbjct: 5 LHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGRYVPR 62
Query: 182 AVFVDLEPTVVDEVRTGTYRQLFHQNNLLLVRKMRXXXXXXXXXXLAKEIVDLVLDRIRK 361
AV +DLEP +D VR+G Y Q+F +N + + E++D VLD +RK
Sbjct: 63 AVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 362 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGNQSKLEFAI*PAPHV 520
A+ C LQGF + H LL+ ++ +Y ++ L F++ P+P V
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKV 175
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 108 bits (260), Expect = 4e-24
Identities = 55/173 (31%), Positives = 89/173 (51%)
Frame = +2
Query: 2 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 181
+ + GQ G QIG WE+ C EHG+ G+ D + + N +++E G++VPR
Sbjct: 5 LHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQL--ERINVYYNEASGGRYVPR 62
Query: 182 AVFVDLEPTVVDEVRTGTYRQLFHQNNLLLVRKMRXXXXXXXXXXLAKEIVDLVLDRIRK 361
AV +DLEP +D VR+G + Q+F +N + + E++D VLD +RK
Sbjct: 63 AVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 362 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGNQSKLEFAI*PAPHV 520
A+ C LQGF + H LL+ ++ +Y ++ L F++ P+P V
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKV 175
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 108 bits (260), Expect = 4e-24
Identities = 56/173 (32%), Positives = 87/173 (50%)
Frame = +2
Query: 2 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 181
+ + GQ G QIG WE+ C EHGI G+ D + + N +++E G+ VPR
Sbjct: 5 LHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQL--ERVNVYYNEASCGRFVPR 62
Query: 182 AVFVDLEPTVVDEVRTGTYRQLFHQNNLLLVRKMRXXXXXXXXXXLAKEIVDLVLDRIRK 361
AV +DLEP +D VR+G Y +F +N + + E++D VLD +RK
Sbjct: 63 AVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRK 122
Query: 362 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGNQSKLEFAI*PAPHV 520
A+ C LQGF + H LL+ ++ +Y ++ L F++ P+P V
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKV 175
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 107 bits (257), Expect = 9e-24
Identities = 56/173 (32%), Positives = 88/173 (50%)
Frame = +2
Query: 2 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 181
+ + GQ G QIG WE+ C EHGI G+ D + + N +++E G+ VPR
Sbjct: 5 LHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGRFVPR 62
Query: 182 AVFVDLEPTVVDEVRTGTYRQLFHQNNLLLVRKMRXXXXXXXXXXLAKEIVDLVLDRIRK 361
AV +DLEP +D VR+G + Q+F +N + + E++D VLD +RK
Sbjct: 63 AVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 362 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGNQSKLEFAI*PAPHV 520
A+ C LQGF + H LL+ ++ +Y ++ L F++ P+P V
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKV 175
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 93.9 bits (223), Expect = 1e-19
Identities = 48/130 (36%), Positives = 69/130 (53%)
Frame = +2
Query: 2 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 181
+ + GQ G QIG WE+ C EHGI P G+ + + + N +++E G+ VPR
Sbjct: 5 LHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQL--ERVNVYYNEASCGRFVPR 62
Query: 182 AVFVDLEPTVVDEVRTGTYRQLFHQNNLLLVRKMRXXXXXXXXXXLAKEIVDLVLDRIRK 361
AV +DLEP +D VRTG Y Q+F +N + + E++D VLD +RK
Sbjct: 63 AVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 362 LADQCTGLQG 391
A+ C LQG
Sbjct: 123 EAENCDCLQG 132
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 90.2 bits (214), Expect = 2e-18
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 181
I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + ++PR
Sbjct: 6 ITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGG--DRKDVFFYQADDQHYIPR 63
Query: 182 AVFVDLEPTVVDEVRTGTYRQLF-HQNNLLLVRKMRXXXXXXXXXXLAKEIVDLVLDRIR 358
A+ VDLEP V++ ++ YR L+ H+N + +++VD ++D I
Sbjct: 64 ALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYHQGEQVVDDIMDMID 123
Query: 359 KLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGNQSKLEFAI*P 508
+ AD L+GF++ H L+E L+ Y + +++ P
Sbjct: 124 READGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFP 173
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 89.4 bits (212), Expect = 3e-18
Identities = 56/189 (29%), Positives = 86/189 (45%), Gaps = 16/189 (8%)
Frame = +2
Query: 2 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 181
+ + GQ G QIG WE+ C EHG+ P G T + N +F+E G+HVPR
Sbjct: 5 LHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTG--TSPQQLERINVYFNEASGGRHVPR 62
Query: 182 AVFVDLEPTVVDEVRTGTYRQLFHQNNLLLVRKMRXXXXXXXXXXLAKEIVDLVLDRIRK 361
AV +DLEP +D +R+G +F +N + + E++D VLD +RK
Sbjct: 63 AVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 362 LADQCTGLQ----------------GFLIFHXXXXXXXXXXXXLLMERLSVDYGNQSKLE 493
A+ C LQ GF + H LL+ ++ +Y ++ L
Sbjct: 123 EAENCDCLQDNRVIRQLGSIDNEQSGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLT 182
Query: 494 FAI*PAPHV 520
F++ P+P V
Sbjct: 183 FSVFPSPKV 191
>04_01_0383 +
5085697-5085724,5085816-5085927,5087249-5087285,
5087512-5087581,5087704-5087808,5088022-5088172,
5088257-5088339,5089152-5089372,5089465-5089501,
5089668-5089753
Length = 309
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -2
Query: 129 SSPPPMVLSVGIWPSGWMPCSR 64
S P P+ LS I SGW+PCSR
Sbjct: 147 SMPYPITLSAVISLSGWLPCSR 168
>01_01_0524 -
3845637-3845727,3845803-3845896,3846415-3846497,
3846587-3846737,3847113-3847217,3847351-3847420,
3847551-3847587,3848155-3848257,3848441-3848480
Length = 257
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -2
Query: 126 SPPPMVLSVGIWPSGWMPCSR 64
+P P+ LSV + SGW+PC+R
Sbjct: 149 NPYPVNLSVSVGLSGWLPCAR 169
>07_03_0483 - 18605176-18606118,18606353-18606482,18606609-18606738
Length = 400
Score = 29.5 bits (63), Expect = 3.0
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 325 LCQWCSDHGHSCWPHLP 275
L ++ S+HGHSCW +P
Sbjct: 24 LVRYISEHGHSCWSSVP 40
>05_07_0299 -
29073900-29073984,29074125-29074158,29074269-29074351,
29074457-29074607,29074853-29074957,29075099-29075168,
29075374-29075410,29076732-29076843,29076956-29076983
Length = 234
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 123 PPPMVLSVGIWPSGWMPCSR 64
P P+ LS I SGW+PCSR
Sbjct: 149 PYPITLSAVISLSGWLPCSR 168
>12_02_0674 - 21745321-21746223,21746229-21747608
Length = 760
Score = 29.1 bits (62), Expect = 4.0
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +3
Query: 402 STPSV-EVP-ALGSLPY*WSVSPLTTATSLNWSSPSSPRLMFSTA 530
STPS E+ A G +P SPL+TAT S+PS+ L ST+
Sbjct: 558 STPSTCELSTATGKIPSTTCTSPLSTATGKTSSTPSTSPLSTSTS 602
>08_01_0312 + 2764744-2767390,2767632-2767990
Length = 1001
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3
Query: 90 ARCPQTRPSGVETILSTLSSARPE 161
+RCPQ RPS + +LS L ARP+
Sbjct: 969 SRCPQERPS-MREVLSMLQEARPK 991
>10_08_0420 - 17788170-17788178,17788239-17789174
Length = 314
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = -1
Query: 325 LCQWCSDHGHSCWPHLP--YQ**VVLMKQLSVCASADLINNSRFKID 191
LC+ SD GH P P + + M Q C++A+ + N RF+ID
Sbjct: 27 LCRGISDRGHKALPSAPPRHSTGQIQMPQTFHCSNANPLGN-RFQID 72
>02_05_1147 -
34447519-34448042,34448126-34449092,34449458-34449657,
34449867-34450051,34450130-34450228,34450316-34450357,
34450516-34450860,34450956-34451101,34451213-34451296,
34451424-34451502,34451596-34451675,34451824-34451875,
34451992-34452026
Length = 945
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +3
Query: 33 RSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPE 161
++ M A T+ S +S P + PSGV L + SSA PE
Sbjct: 690 QTAMAASQATSISRGASQPLAVPNSMPSGVNFPLQSSSSAPPE 732
>01_05_0685 +
24273331-24273569,24275429-24275465,24275739-24275808,
24275978-24276082,24276205-24276355,24276454-24276536,
24276619-24276712,24276796-24276883
Length = 288
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2
Query: 117 PMVLSVGIWPSGWMPCSR 64
P+ LS I SGW+PCSR
Sbjct: 184 PVTLSAVIGLSGWLPCSR 201
>05_01_0140 -
931039-931146,932659-932875,933117-933484,933644-933733
Length = 260
Score = 27.9 bits (59), Expect = 9.2
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = -3
Query: 707 ADLEVGRKFGPLQLSRITGGPECQ*NGLSIVVPNEKLQFRVLKGLCG*AEGIRVVGLD 534
A + F P L+ T G G+S +P E+ + V + +C A G+R+V LD
Sbjct: 138 ATINTALSFSPCLLNNDTQGSPAV--GMSGSLPAERHRSGVAEAMCRLASGVRMVVLD 193
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,178,508
Number of Sequences: 37544
Number of extensions: 532974
Number of successful extensions: 1661
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1628
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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