Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30869
         (757 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    43   1e-05
AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.    41   4e-05
AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.    41   4e-05
AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.    41   4e-05
AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.    41   4e-05
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   0.47 
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    25   3.3  
CR954257-8|CAJ14159.1|  562|Anopheles gambiae putative esterase ...    23   7.7  

>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 42.7 bits (96), Expect = 1e-05
 Identities = 27/73 (36%), Positives = 31/73 (42%)
 Frame = +3

Query: 45  PAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASTYPVXXXXXXXXXXXXXX 224
           P    T WS AS+   RCP+TR S      ST SS R   AST PV              
Sbjct: 19  PCWDCTVWSMASNRTVRCPRTRRSEAVMTRSTPSSPRLAQASTCPVPCSSIWSRPSSMRC 78

Query: 225 XXAHTDSCFIRTT 263
             A T SC  R++
Sbjct: 79  APARTASCSTRSS 91



 Score = 40.7 bits (91), Expect = 5e-05
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = +2

Query: 2  ISVHVGQAGVQIGNACWE 55
          ISVHVGQAGVQIGN CW+
Sbjct: 5  ISVHVGQAGVQIGNPCWD 22


>AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 41.1 bits (92), Expect = 4e-05
 Identities = 20/65 (30%), Positives = 34/65 (52%)
 Frame = +2

Query: 326 EIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGNQSKLEFAI* 505
           E+VD VLD +RK  + C  LQGF + H            LL+ ++  +Y ++    +++ 
Sbjct: 7   ELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVV 66

Query: 506 PAPHV 520
           P+P V
Sbjct: 67  PSPKV 71


>AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 41.1 bits (92), Expect = 4e-05
 Identities = 20/65 (30%), Positives = 34/65 (52%)
 Frame = +2

Query: 326 EIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGNQSKLEFAI* 505
           E+VD VLD +RK  + C  LQGF + H            LL+ ++  +Y ++    +++ 
Sbjct: 7   ELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVV 66

Query: 506 PAPHV 520
           P+P V
Sbjct: 67  PSPKV 71


>AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 41.1 bits (92), Expect = 4e-05
 Identities = 20/65 (30%), Positives = 34/65 (52%)
 Frame = +2

Query: 326 EIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGNQSKLEFAI* 505
           E+VD VLD +RK  + C  LQGF + H            LL+ ++  +Y ++    +++ 
Sbjct: 7   ELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVV 66

Query: 506 PAPHV 520
           P+P V
Sbjct: 67  PSPKV 71


>AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 41.1 bits (92), Expect = 4e-05
 Identities = 20/65 (30%), Positives = 34/65 (52%)
 Frame = +2

Query: 326 EIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGNQSKLEFAI* 505
           E+VD VLD +RK  + C  LQGF + H            LL+ ++  +Y ++    +++ 
Sbjct: 7   ELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVV 66

Query: 506 PAPHV 520
           P+P V
Sbjct: 67  PSPKV 71


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.8 bits (49), Expect(2) = 0.47
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 96  CPQTRPSGVETILSTLSSARPELAS 170
           C   RPS ++   ++ S  RP+LA+
Sbjct: 164 CGSARPSRIDVAFASPSICRPDLAA 188



 Score = 21.8 bits (44), Expect(2) = 0.47
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 39  VMPAGSFTAWSTASSLMARCPQTRPSGV 122
           V+ AG F AW TA        +T+P G+
Sbjct: 116 VLLAGDFNAWHTAWG----SERTKPKGI 139


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +3

Query: 492  SSPSSPRLMFSTAVVEPYNSYAFSSPTQP 578
            S P+SP L+  TAV +P++ YA  +  +P
Sbjct: 1260 SPPASP-LVPDTAVPDPHSLYAIPNKVKP 1287


>CR954257-8|CAJ14159.1|  562|Anopheles gambiae putative esterase
           protein.
          Length = 562

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +3

Query: 438 LPY*WSVSPLTTATSLNWSSPSSPRLMFSTAVVEPYNSYA-FSSPT 572
           +PY WSV+ LT +  L    P++     S   V  + ++A F +PT
Sbjct: 460 IPYLWSVTDLTISPIL----PTNHARTVSNRFVRLFTNFARFGNPT 501


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 859,893
Number of Sequences: 2352
Number of extensions: 17951
Number of successful extensions: 43
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78170964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)