Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30869
(757 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 255 3e-68
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 255 3e-68
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 255 3e-68
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 255 3e-68
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 229 1e-60
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 229 2e-60
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 229 2e-60
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 228 4e-60
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 228 4e-60
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 226 2e-59
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 223 1e-58
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 223 1e-58
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 215 2e-56
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 207 7e-54
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 186 1e-47
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 175 3e-44
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 112 3e-25
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 111 7e-25
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 109 2e-24
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 108 5e-24
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 108 5e-24
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 107 8e-24
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 90 2e-18
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 90 2e-18
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 66 3e-11
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 66 3e-11
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 32 0.51
AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear recep... 29 3.6
AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormo... 29 3.6
AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormo... 29 3.6
AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical... 28 6.2
Z81470-4|CAB03879.1| 550|Caenorhabditis elegans Hypothetical pr... 28 8.2
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 255 bits (624), Expect = 3e-68
Identities = 115/173 (66%), Positives = 135/173 (78%)
Frame = +2
Query: 2 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 181
IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+HVPR
Sbjct: 5 ISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPR 64
Query: 182 AVFVDLEPTVVDEVRTGTYRQLFHQNNLLLVRKMRXXXXXXXXXXLAKEIVDLVLDRIRK 361
AV VDLEPTV+DE+RTGTYR LFH L+ ++ + KEI+DL LDRIR+
Sbjct: 65 AVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRR 124
Query: 362 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGNQSKLEFAI*PAPHV 520
LAD CTGLQGFL+FH LLMERLSVDYG ++KLEF+I PAP V
Sbjct: 125 LADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQV 177
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 255 bits (624), Expect = 3e-68
Identities = 115/173 (66%), Positives = 135/173 (78%)
Frame = +2
Query: 2 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 181
IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+HVPR
Sbjct: 4 ISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPR 63
Query: 182 AVFVDLEPTVVDEVRTGTYRQLFHQNNLLLVRKMRXXXXXXXXXXLAKEIVDLVLDRIRK 361
AV VDLEPTV+DE+RTGTYR LFH L+ ++ + KEI+DL LDRIR+
Sbjct: 64 AVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRR 123
Query: 362 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGNQSKLEFAI*PAPHV 520
LAD CTGLQGFL+FH LLMERLSVDYG ++KLEF+I PAP V
Sbjct: 124 LADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQV 176
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 255 bits (624), Expect = 3e-68
Identities = 115/173 (66%), Positives = 135/173 (78%)
Frame = +2
Query: 2 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 181
IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+HVPR
Sbjct: 5 ISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPR 64
Query: 182 AVFVDLEPTVVDEVRTGTYRQLFHQNNLLLVRKMRXXXXXXXXXXLAKEIVDLVLDRIRK 361
AV VDLEPTV+DE+RTGTYR LFH L+ ++ + KEI+DL LDRIR+
Sbjct: 65 AVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRR 124
Query: 362 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGNQSKLEFAI*PAPHV 520
LAD CTGLQGFL+FH LLMERLSVDYG ++KLEF+I PAP V
Sbjct: 125 LADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQV 177
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 255 bits (624), Expect = 3e-68
Identities = 115/173 (66%), Positives = 135/173 (78%)
Frame = +2
Query: 2 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 181
IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+HVPR
Sbjct: 5 ISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPR 64
Query: 182 AVFVDLEPTVVDEVRTGTYRQLFHQNNLLLVRKMRXXXXXXXXXXLAKEIVDLVLDRIRK 361
AV VDLEPTV+DE+RTGTYR LFH L+ ++ + KEI+DL LDRIR+
Sbjct: 65 AVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRR 124
Query: 362 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGNQSKLEFAI*PAPHV 520
LAD CTGLQGFL+FH LLMERLSVDYG ++KLEF+I PAP V
Sbjct: 125 LADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQV 177
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 229 bits (561), Expect = 1e-60
Identities = 105/173 (60%), Positives = 126/173 (72%)
Frame = +2
Query: 2 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 181
IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET AGKHVPR
Sbjct: 10 ISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAGKHVPR 69
Query: 182 AVFVDLEPTVVDEVRTGTYRQLFHQNNLLLVRKMRXXXXXXXXXXLAKEIVDLVLDRIRK 361
A+ VDLEPT +DE+RTGTY+ LFH LL ++ + KEI+D+V+DR+R+
Sbjct: 70 AIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVMDRVRR 129
Query: 362 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGNQSKLEFAI*PAPHV 520
L + C GLQGFL+FH LLMERLSVDYG +SKLEF I PAP V
Sbjct: 130 LVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSKLEFCIYPAPQV 182
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 229 bits (560), Expect = 2e-60
Identities = 106/173 (61%), Positives = 129/173 (74%)
Frame = +2
Query: 2 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 181
IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G++VPR
Sbjct: 5 ISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGRYVPR 62
Query: 182 AVFVDLEPTVVDEVRTGTYRQLFHQNNLLLVRKMRXXXXXXXXXXLAKEIVDLVLDRIRK 361
++FVDLEPTVVDE+RTGTY++LFH ++ ++ + KE++D VLDRIR+
Sbjct: 63 SIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRR 122
Query: 362 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGNQSKLEFAI*PAPHV 520
LAD C+GLQGF +FH LLMERLSVDYG +SKLEF+I PAP V
Sbjct: 123 LADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQV 175
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 229 bits (560), Expect = 2e-60
Identities = 106/173 (61%), Positives = 129/173 (74%)
Frame = +2
Query: 2 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 181
IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G++VPR
Sbjct: 5 ISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGRYVPR 62
Query: 182 AVFVDLEPTVVDEVRTGTYRQLFHQNNLLLVRKMRXXXXXXXXXXLAKEIVDLVLDRIRK 361
++FVDLEPTVVDE+RTGTY++LFH ++ ++ + KE++D VLDRIR+
Sbjct: 63 SIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRR 122
Query: 362 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGNQSKLEFAI*PAPHV 520
LAD C+GLQGF +FH LLMERLSVDYG +SKLEF+I PAP V
Sbjct: 123 LADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQV 175
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 228 bits (557), Expect = 4e-60
Identities = 105/173 (60%), Positives = 129/173 (74%)
Frame = +2
Query: 2 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 181
IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G++VPR
Sbjct: 5 ISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGRYVPR 62
Query: 182 AVFVDLEPTVVDEVRTGTYRQLFHQNNLLLVRKMRXXXXXXXXXXLAKEIVDLVLDRIRK 361
++FVDLEPTVVDE+RTGTY++LFH ++ ++ + KE++D VLDRIR+
Sbjct: 63 SIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRR 122
Query: 362 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGNQSKLEFAI*PAPHV 520
LAD C+GLQGF +FH LLMERLSVDYG +SKLEF+I PAP V
Sbjct: 123 LADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQV 175
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 228 bits (557), Expect = 4e-60
Identities = 105/173 (60%), Positives = 129/173 (74%)
Frame = +2
Query: 2 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 181
IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G++VPR
Sbjct: 5 ISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGRYVPR 62
Query: 182 AVFVDLEPTVVDEVRTGTYRQLFHQNNLLLVRKMRXXXXXXXXXXLAKEIVDLVLDRIRK 361
++FVDLEPTVVDE+RTGTY++LFH ++ ++ + KE++D VLDRIR+
Sbjct: 63 SIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRR 122
Query: 362 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGNQSKLEFAI*PAPHV 520
LAD C+GLQGF +FH LLMERLSVDYG +SKLEF+I PAP V
Sbjct: 123 LADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQV 175
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 226 bits (552), Expect = 2e-59
Identities = 100/173 (57%), Positives = 127/173 (73%)
Frame = +2
Query: 2 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 181
+S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GKHVPR
Sbjct: 5 VSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGKHVPR 64
Query: 182 AVFVDLEPTVVDEVRTGTYRQLFHQNNLLLVRKMRXXXXXXXXXXLAKEIVDLVLDRIRK 361
A+FVDLEPTV+DEVRTGTY +LFH L+ ++ + KE++D+V+DR+R+
Sbjct: 65 AIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMDRVRR 124
Query: 362 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGNQSKLEFAI*PAPHV 520
L ++C LQGFLIFH L+MERLS+DYG ++KLEF+I PAP +
Sbjct: 125 LTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKKAKLEFSIYPAPQI 177
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 223 bits (545), Expect = 1e-58
Identities = 103/173 (59%), Positives = 127/173 (73%)
Frame = +2
Query: 2 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 181
IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G++VPR
Sbjct: 5 ISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGRYVPR 62
Query: 182 AVFVDLEPTVVDEVRTGTYRQLFHQNNLLLVRKMRXXXXXXXXXXLAKEIVDLVLDRIRK 361
++FVDLEPTVVDE+RTG Y++LFH ++ ++ + KE++D LDRIR+
Sbjct: 63 SIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRR 122
Query: 362 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGNQSKLEFAI*PAPHV 520
LAD C+GLQGF +FH LLMERLSVDYG +SKLEF+I PAP V
Sbjct: 123 LADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQV 175
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 223 bits (545), Expect = 1e-58
Identities = 103/173 (59%), Positives = 127/173 (73%)
Frame = +2
Query: 2 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 181
IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G++VPR
Sbjct: 5 ISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGRYVPR 62
Query: 182 AVFVDLEPTVVDEVRTGTYRQLFHQNNLLLVRKMRXXXXXXXXXXLAKEIVDLVLDRIRK 361
++FVDLEPTVVDE+RTG Y++LFH ++ ++ + KE++D LDRIR+
Sbjct: 63 SIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRR 122
Query: 362 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGNQSKLEFAI*PAPHV 520
LAD C+GLQGF +FH LLMERLSVDYG +SKLEF+I PAP V
Sbjct: 123 LADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQV 175
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 215 bits (526), Expect = 2e-56
Identities = 100/173 (57%), Positives = 121/173 (69%)
Frame = +2
Query: 2 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 181
IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GKHVPR
Sbjct: 11 ISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPR 70
Query: 182 AVFVDLEPTVVDEVRTGTYRQLFHQNNLLLVRKMRXXXXXXXXXXLAKEIVDLVLDRIRK 361
+FVDLEPTVVDEVRTGTYR LFH LL ++ + +E++D+V+DR+++
Sbjct: 71 CLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKR 130
Query: 362 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGNQSKLEFAI*PAPHV 520
LA+ C GLQGF+IFH LLMERLS +YG + KLEFAI PAP V
Sbjct: 131 LAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQV 183
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 207 bits (505), Expect = 7e-54
Identities = 97/173 (56%), Positives = 118/173 (68%)
Frame = +2
Query: 2 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 181
IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG G+HVPR
Sbjct: 5 ISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGRHVPR 61
Query: 182 AVFVDLEPTVVDEVRTGTYRQLFHQNNLLLVRKMRXXXXXXXXXXLAKEIVDLVLDRIRK 361
++FVDLEPTVVDE+RTG Y++LFH +L ++ + KEI+D LDRIR+
Sbjct: 62 SIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRIRR 121
Query: 362 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGNQSKLEFAI*PAPHV 520
LA+ C GLQGF +FH +LMERLS +YG +SKLEF+I PAP +
Sbjct: 122 LANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQI 174
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 186 bits (453), Expect = 1e-47
Identities = 85/173 (49%), Positives = 114/173 (65%)
Frame = +2
Query: 2 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 181
+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ GKHVPR
Sbjct: 9 VSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKHVPR 67
Query: 182 AVFVDLEPTVVDEVRTGTYRQLFHQNNLLLVRKMRXXXXXXXXXXLAKEIVDLVLDRIRK 361
A++VDLEPTV+DE+R G Y LFH + ++ ++ + KE++D+VLDRIRK
Sbjct: 68 AIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRIRK 127
Query: 362 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGNQSKLEFAI*PAPHV 520
+ C GLQGFL+FH LLMERLSV++G +SKLEF++ PAP V
Sbjct: 128 QTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQV 180
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 175 bits (426), Expect = 3e-44
Identities = 82/155 (52%), Positives = 103/155 (66%)
Frame = +2
Query: 56 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 235
++CLEHGIQPDG D T ++ NTFF+ET GKHVPR +FVDLEPTVVDEVRTGT
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 236 YRQLFHQNNLLLVRKMRXXXXXXXXXXLAKEIVDLVLDRIRKLADQCTGLQGFLIFHXXX 415
YR LFH LL ++ + +E++D+V+DR+++LA+ C GLQGF+IFH
Sbjct: 61 YRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFG 120
Query: 416 XXXXXXXXXLLMERLSVDYGNQSKLEFAI*PAPHV 520
LLMERLS +YG + KLEFAI PAP V
Sbjct: 121 GGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQV 155
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 112 bits (269), Expect = 3e-25
Identities = 61/173 (35%), Positives = 89/173 (51%)
Frame = +2
Query: 2 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 181
+ V GQ G QIG WE+ EHGIQPDG + + + N +++E GK+VPR
Sbjct: 5 VHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQL--ERINVYYNEANGGKYVPR 62
Query: 182 AVFVDLEPTVVDEVRTGTYRQLFHQNNLLLVRKMRXXXXXXXXXXLAKEIVDLVLDRIRK 361
AV VDLEP +D VR+G + QLF +N + + E+VD VLD +RK
Sbjct: 63 AVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRK 122
Query: 362 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGNQSKLEFAI*PAPHV 520
A+ C LQGF + H LL+ ++ +Y ++ F++ P+P V
Sbjct: 123 EAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKV 175
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 111 bits (266), Expect = 7e-25
Identities = 61/173 (35%), Positives = 90/173 (52%)
Frame = +2
Query: 2 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 181
+ V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK+VPR
Sbjct: 5 VHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL--ERIDVYYNEANNGKYVPR 62
Query: 182 AVFVDLEPTVVDEVRTGTYRQLFHQNNLLLVRKMRXXXXXXXXXXLAKEIVDLVLDRIRK 361
AV VDLEP +D VR+G + QLF +N + + E+VD VLD IRK
Sbjct: 63 AVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRK 122
Query: 362 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGNQSKLEFAI*PAPHV 520
A+ C LQGF + H LL+ ++ +Y ++ F++ P+P V
Sbjct: 123 EAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKV 175
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 109 bits (263), Expect = 2e-24
Identities = 60/173 (34%), Positives = 90/173 (52%)
Frame = +2
Query: 2 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 181
+ V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK+VPR
Sbjct: 5 VHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQL--ERIDVYYNEANNGKYVPR 62
Query: 182 AVFVDLEPTVVDEVRTGTYRQLFHQNNLLLVRKMRXXXXXXXXXXLAKEIVDLVLDRIRK 361
AV VDLEP +D VR+G + QLF +N + + E+VD VLD IRK
Sbjct: 63 AVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRK 122
Query: 362 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGNQSKLEFAI*PAPHV 520
A+ C LQGF + H LL+ ++ ++ ++ F++ P+P V
Sbjct: 123 EAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMSSFSVVPSPKV 175
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 108 bits (259), Expect = 5e-24
Identities = 59/173 (34%), Positives = 89/173 (51%)
Frame = +2
Query: 2 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 181
+ + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K+VPR
Sbjct: 5 VHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNKYVPR 62
Query: 182 AVFVDLEPTVVDEVRTGTYRQLFHQNNLLLVRKMRXXXXXXXXXXLAKEIVDLVLDRIRK 361
AV VDLEP +D VR+G + QLF +N + + E+VD VLD +RK
Sbjct: 63 AVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRK 122
Query: 362 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGNQSKLEFAI*PAPHV 520
A+ LQGF + H LL+ ++ +Y ++ F++ P+P V
Sbjct: 123 EAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKV 175
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 108 bits (259), Expect = 5e-24
Identities = 59/173 (34%), Positives = 89/173 (51%)
Frame = +2
Query: 2 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 181
+ + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K+VPR
Sbjct: 5 VHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNKYVPR 62
Query: 182 AVFVDLEPTVVDEVRTGTYRQLFHQNNLLLVRKMRXXXXXXXXXXLAKEIVDLVLDRIRK 361
AV VDLEP +D VR+G + QLF +N + + E+VD VLD +RK
Sbjct: 63 AVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRK 122
Query: 362 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGNQSKLEFAI*PAPHV 520
A+ LQGF + H LL+ ++ +Y ++ F++ P+P V
Sbjct: 123 EAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKV 175
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 107 bits (257), Expect = 8e-24
Identities = 58/173 (33%), Positives = 86/173 (49%)
Frame = +2
Query: 2 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 181
+ + GQ G QIG WE+ EHGI P G D + + N +++E GK+VPR
Sbjct: 5 VHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQL--ERINVYYNEASGGKYVPR 62
Query: 182 AVFVDLEPTVVDEVRTGTYRQLFHQNNLLLVRKMRXXXXXXXXXXLAKEIVDLVLDRIRK 361
A VDLEP +D VR G + QLF +N + + E+VD VLD +RK
Sbjct: 63 ACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRK 122
Query: 362 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGNQSKLEFAI*PAPHV 520
A+ C LQGF + H LL+ ++ +Y ++ + F++ P+P V
Sbjct: 123 EAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMMTFSVVPSPKV 175
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 89.8 bits (213), Expect = 2e-18
Identities = 55/173 (31%), Positives = 81/173 (46%)
Frame = +2
Query: 2 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 181
I+V VGQ G QIG WE EHG+Q DG D G + +++ E K+VPR
Sbjct: 5 INVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRKYVPR 62
Query: 182 AVFVDLEPTVVDEVRTGTYRQLFHQNNLLLVRKMRXXXXXXXXXXLAKEIVDLVLDRIRK 361
A+ VDL+P ++ VR+ Y +LF N + EIVD VL IR+
Sbjct: 63 AILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRR 122
Query: 362 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGNQSKLEFAI*PAPHV 520
A+ L+GF + H LL+ +L +Y +++ +I P+ V
Sbjct: 123 EAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKV 175
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 89.8 bits (213), Expect = 2e-18
Identities = 55/173 (31%), Positives = 81/173 (46%)
Frame = +2
Query: 2 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 181
I+V VGQ G QIG WE EHG+Q DG D G + +++ E K+VPR
Sbjct: 5 INVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRKYVPR 62
Query: 182 AVFVDLEPTVVDEVRTGTYRQLFHQNNLLLVRKMRXXXXXXXXXXLAKEIVDLVLDRIRK 361
A+ VDL+P ++ VR+ Y +LF N + EIVD VL IR+
Sbjct: 63 AILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRR 122
Query: 362 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGNQSKLEFAI*PAPHV 520
A+ L+GF + H LL+ +L +Y +++ +I P+ V
Sbjct: 123 EAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKV 175
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 65.7 bits (153), Expect = 3e-11
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 2/155 (1%)
Frame = +2
Query: 2 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 181
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 182 AVFVDLEPTVVD-EVRTGTYRQLFHQNNLLLV-RKMRXXXXXXXXXXLAKEIVDLVLDRI 355
AV VDLEP V++ +++ + LF+ +N+ + +E+ + ++D I
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASGYCQGQEVQEKIMDII 124
Query: 356 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERL 460
+ A+ L G L H LL+ERL
Sbjct: 125 IREAENTNNLDGILFTHSVSGGTGSGTGSLLLERL 159
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 65.7 bits (153), Expect = 3e-11
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 2/155 (1%)
Frame = +2
Query: 2 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 181
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 182 AVFVDLEPTVVD-EVRTGTYRQLFHQNNLLLV-RKMRXXXXXXXXXXLAKEIVDLVLDRI 355
AV VDLEP V++ +++ + LF+ +N+ + +E+ + ++D I
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASGYCQGQEVQEKIMDII 124
Query: 356 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERL 460
+ A+ L G L H LL+ERL
Sbjct: 125 IREAENTNNLDGILFTHSVSGGTGSGTGSLLLERL 159
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 31.9 bits (69), Expect = 0.51
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +3
Query: 18 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELAST 173
A P MP+ S + S++SS M + P+ PS ++T+L+++ + E AST
Sbjct: 189 ATPALLPFMPSSSTFSASSSSSEMEQTPE--PSSLDTVLTSMMNNNEEAAST 238
>AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear receptor
NHR-80 protein.
Length = 486
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 32 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 211
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 212 VDE 220
DE
Sbjct: 116 ADE 118
>AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform b protein.
Length = 504
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 32 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 211
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 81 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 133
Query: 212 VDE 220
DE
Sbjct: 134 ADE 136
>AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform a protein.
Length = 486
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 32 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 211
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 212 VDE 220
DE
Sbjct: 116 ADE 118
>AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical
protein Y43F8C.16 protein.
Length = 370
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/77 (27%), Positives = 34/77 (44%)
Frame = +3
Query: 348 TESASSLTSVPVCKDS*SSTPSVEVPALGSLPY*WSVSPLTTATSLNWSSPSSPRLMFST 527
T + S TS + ST + + ++ S P +T T+ +PSSP + ST
Sbjct: 150 TSTTSITTSTLSPPSTVQSTTTAKPTTTSTITPTTSADPTSTITTSTTPNPSSPSTVQST 209
Query: 528 AVVEPYNSYAFSSPTQP 578
EP ++ +S T P
Sbjct: 210 TTAEPTST--ITSTTVP 224
>Z81470-4|CAB03879.1| 550|Caenorhabditis elegans Hypothetical
protein C14A6.5 protein.
Length = 550
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +3
Query: 513 LMFSTAVVEPYNSYAFSSPTQPFEHSEL*LFIGYD 617
+ +ST V+ + Y +S+PT P+ +L + GYD
Sbjct: 297 IFYSTPAVQQW--YIYSNPTVPYNERKLCILDGYD 329
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,653,131
Number of Sequences: 27780
Number of extensions: 411668
Number of successful extensions: 1171
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1114
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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