Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30868
(850 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0022 + 7461902-7462951 31 0.88
01_06_0919 - 32993752-32993856,32994383-32994592,32994666-329952... 31 0.88
07_03_1249 - 25172651-25172893,25173001-25173355,25173435-251735... 31 1.2
06_01_0868 - 6606913-6607000,6607516-6608010,6610313-6610761,661... 31 1.2
04_04_0465 + 25427065-25427113,25428099-25428227,25428387-254284... 31 1.2
08_01_0600 - 5262573-5262773,5262850-5262952,5263050-5263180,526... 31 1.5
05_03_0561 - 15476484-15476649,15476814-15476893,15476971-154770... 31 1.5
08_01_0171 - 1447782-1447935,1448016-1448480,1448578-1450004 30 2.0
04_04_1366 + 32970640-32970981,32971678-32971765,32971919-329720... 30 2.0
02_05_0235 - 27068516-27069032,27069697-27069788,27070056-270702... 30 2.0
12_02_0800 + 23299674-23299678,23299714-23299791,23299876-232999... 30 2.7
05_01_0201 - 1441063-1443836,1444658-1445758,1446367-1447179,144... 30 2.7
10_08_0527 - 18555231-18555882,18556334-18556463,18557073-18557175 29 3.5
09_04_0430 + 17502387-17503505 29 3.5
04_03_0799 - 19805190-19805749,19806316-19806403 29 3.5
03_05_0543 - 25404630-25405408,25405461-25405605 29 3.5
12_01_0519 - 4102251-4102352,4102522-4103439,4104763-4104837 29 4.7
08_02_1613 + 28236989-28238593 29 4.7
08_01_0170 - 1440908-1441072,1441539-1441581,1442155-1442619,144... 29 6.2
11_01_0307 + 2304500-2306023 28 8.2
10_03_0023 - 7151465-7152111,7152222-7152405 28 8.2
08_02_0176 - 13777476-13777568,13779610-13780053 28 8.2
01_06_1678 - 39095986-39096205,39096400-39096477,39096578-390969... 28 8.2
01_03_0117 + 12684729-12685886,12685978-12686145,12686292-126863... 28 8.2
01_02_0022 + 10290033-10290407,10290497-10290848,10290923-102910... 28 8.2
>11_02_0022 + 7461902-7462951
Length = 349
Score = 31.5 bits (68), Expect = 0.88
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +3
Query: 78 SAPGSGVGAACGHSIGRTAEMGCAQSAEERAAACSKQIDR*ELEREWYSGIK 233
S+ +G GA G I R + C + A E AC+ DR E+ R + S ++
Sbjct: 81 SSASAGAGAGAGVGIDRKSVDECVEDAAELLDACAGLRDRLEMIRGYVSSMR 132
>01_06_0919 -
32993752-32993856,32994383-32994592,32994666-32995220,
32995705-32995926,32996381-32996511,32997456-32998353,
32998453-32998530,32998612-32998683,32998728-32998763,
32999413-33000353,33000531-33000659,33000751-33000894,
33000994-33001060,33002434-33002502,33003144-33003278
Length = 1263
Score = 31.5 bits (68), Expect = 0.88
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +3
Query: 201 ELEREWYSGIKRHQAIVVGAGESGKSTIVKQMKIIHESGFTNEDFKQYRPVVYSN 365
E + EW I HQA+ +G G++G S + Q + ++E+ Q ++ N
Sbjct: 41 EQQHEWRWAINGHQAVGIGEGQTGSSLVGNQGLEMPVDSTSSENAFQNHEEIFEN 95
>07_03_1249 -
25172651-25172893,25173001-25173355,25173435-25173593,
25173809-25174269,25175137-25175322,25175429-25175800
Length = 591
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Frame = +1
Query: 85 PARESGRPAAIA*GE----LPKWGAPSRPKSVQRPARSKL 192
P R+ G AA A E LP+W PS P S RPA ++
Sbjct: 28 PPRQQGHAAAAASLEQLLLLPRWSPPSSPLSFARPAAERV 67
>06_01_0868 -
6606913-6607000,6607516-6608010,6610313-6610761,
6610863-6610979,6611892-6612863
Length = 706
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +1
Query: 37 RQDACRAHAERSVRARPARESGRPAAIA*GELPKWGAPSRPKSVQRPARSKLIDKNLK 210
++ A A + A PA + RPAA+A + G+PS P SV++ +R + K
Sbjct: 63 KEAASLGDAGGNADASPAAPALRPAAVADADGASKGSPSTPASVKKTSRLNKVKAKAK 120
>04_04_0465 +
25427065-25427113,25428099-25428227,25428387-25428479,
25428681-25428953,25429037-25429288,25429735-25430118,
25430243-25430483,25431986-25432736
Length = 723
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = -1
Query: 148 AHPISAVLPMLWPQAAPTPE---PGALSPISQHALYTRPVAPALPEP 17
AH S P P AP PE PG P+ +H VAP LP P
Sbjct: 38 AHRHSLPAPAPAPAPAPAPETHRPGIRHPVPRHHRKRPHVAPPLPPP 84
>08_01_0600 -
5262573-5262773,5262850-5262952,5263050-5263180,
5263263-5263312,5265266-5265725,5266349-5266708
Length = 434
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = -1
Query: 124 PMLWPQAAPTPEPG-ALSPISQHALYTRP--VAPALPEPP 14
P +W QA P P+P P +Q Y P APA+P P
Sbjct: 52 PQMWGQAPPPPQPAYGQPPPAQAGYYGAPPQAAPAVPAGP 91
>05_03_0561 -
15476484-15476649,15476814-15476893,15476971-15477030,
15477117-15477210,15477287-15477421,15477601-15477656,
15478359-15478460,15478544-15478651,15479206-15479283,
15479432-15479521,15480061-15480123
Length = 343
Score = 30.7 bits (66), Expect = 1.5
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Frame = +2
Query: 518 MKRLWADSGVQECFGRSNEYQLNDFR*IFSWTTSNRFRKQRITSPTEQDYPKGLRSQNDL 697
+KRLW D +QE + R + QL D F + PT++D N +
Sbjct: 103 VKRLWQDPAIQETYLRGSILQLPDCAQYFMENLDRLAEAGYV--PTKEDVLYARVRTNGV 160
Query: 698 EFVEVTFLLPKTFNFQI--VPNVGGQRFREGRNWIPLPFEG 814
++ + + ++ + +VGGQR E R WI L FEG
Sbjct: 161 VQIQFSPVGENKRGGEVYRLYDVGGQR-NERRKWIHL-FEG 199
>08_01_0171 - 1447782-1447935,1448016-1448480,1448578-1450004
Length = 681
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/53 (26%), Positives = 29/53 (54%)
Frame = -1
Query: 214 SLSSSYRSICFEQAAARSSADWAHPISAVLPMLWPQAAPTPEPGALSPISQHA 56
S+ S+Y +SS+ + ++A + P ++P+P P +L+PI+ H+
Sbjct: 245 SIGSAYEQHQLTSWYFKSSSSFEQKLAAKVASPPPPSSPSPPPPSLTPITSHS 297
>04_04_1366 +
32970640-32970981,32971678-32971765,32971919-32972014,
32972583-32972593
Length = 178
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 66 EIGESAPGSGVGAACGHSIGRTAEMGCAQSAEERAAA 176
E G G G G A G A++G A+ A+ AAA
Sbjct: 68 EAGRGGGGGGAGGAAGELARLAADLGAAERADAEAAA 104
>02_05_0235 -
27068516-27069032,27069697-27069788,27070056-27070289,
27071569-27071676,27071796-27071855,27072368-27072443,
27072550-27072710,27076919-27076981,27077061-27077148,
27077568-27078308,27078406-27079033,27079314-27079368,
27082073-27083527
Length = 1425
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 114 HSIGRTAEMGCAQSAEERAAACSKQIDR 197
HS TAE GC +A+ R+A+ SK++ R
Sbjct: 577 HSKDPTAEKGCWSTAQSRSASPSKEVSR 604
>12_02_0800 +
23299674-23299678,23299714-23299791,23299876-23299920,
23300052-23300415,23300493-23300574,23300793-23300873,
23300974-23302106,23302202-23302350,23302426-23302516,
23303628-23305940
Length = 1446
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +3
Query: 552 SALVVPTSTNSTTSAKYFPGRPRTGLGSKGLPAPPNKIILKDLEVKTTWNSS 707
S+L+ P + S+ S +F GRP +G GS+ P+ + L+ W SS
Sbjct: 63 SSLLSPKNDGSSNSPSHFNGRPSSGGGSR-----PSTAGSESLDSPNAWGSS 109
>05_01_0201 -
1441063-1443836,1444658-1445758,1446367-1447179,
1447386-1447440
Length = 1580
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = -1
Query: 187 CFEQAAARSSADWAHPISAV--LPMLWPQAAPTPEPGALSPISQ 62
C AA S A P++A P + P AAP+P P SP+ +
Sbjct: 249 CVSPVAAPSPTPCASPVAAPSPAPCVSPVAAPSPAPPCKSPVPE 292
>10_08_0527 - 18555231-18555882,18556334-18556463,18557073-18557175
Length = 294
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/53 (37%), Positives = 22/53 (41%)
Frame = -1
Query: 172 AARSSADWAHPISAVLPMLWPQAAPTPEPGALSPISQHALYTRPVAPALPEPP 14
AA ++A P S P AA EP A PIS L P P P PP
Sbjct: 159 AAAAAAGELAPYSISSPAATADAAEEEEPIAAVPISTCILALPPPPPPPPPPP 211
>09_04_0430 + 17502387-17503505
Length = 372
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/56 (35%), Positives = 25/56 (44%)
Frame = -1
Query: 181 EQAAARSSADWAHPISAVLPMLWPQAAPTPEPGALSPISQHALYTRPVAPALPEPP 14
+ AAA ++A A PM PQ P P+P +P L T P AP PP
Sbjct: 143 DAAAAAAAAAAARAYHPPAPMQQPQPQPPPQP---TPPRAAPLPTPPRAPPQSTPP 195
>04_03_0799 - 19805190-19805749,19806316-19806403
Length = 215
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -1
Query: 142 PISAVLPMLWPQAAPTPEPGALSPISQHALYTRPVAPALPEP 17
P+ ++P P AP P P A P S H Y AP P+P
Sbjct: 94 PVCKLVPFPVPYPAPPPPP-ACCPPSTHQCYHCCPAPPKPKP 134
>03_05_0543 - 25404630-25405408,25405461-25405605
Length = 307
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = -1
Query: 148 AHPISAV-LPMLWPQAAPTPEPGALSP-ISQHALYTRPVAPALPEP 17
A P+ V P P+ AP P P L+P +SQ L R AP +PEP
Sbjct: 143 AAPLPGVRTPPSPPRRAPAPAPAPLTPALSQRFLAERRPAP-VPEP 187
>12_01_0519 - 4102251-4102352,4102522-4103439,4104763-4104837
Length = 364
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +3
Query: 282 IVKQMKIIHESGFTNEDFKQYRPVVYSNTIQSLVAILRAMPNLGIIYGN 428
++K +K IH+ GFT+E FK + ++ I + R + +L + N
Sbjct: 305 LLKVLKAIHKKGFTDEGFKDHALLLEKQDIDGKLGKSREVRSLTNVVKN 353
>08_02_1613 + 28236989-28238593
Length = 534
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = +2
Query: 647 SPTEQDYPKGLRSQNDLEFVEVTFLLPKTFNFQIVPNVGGQRFREGRNWIPLPFEGP*PA 826
S TE YP G+ +N L + LL F F +VP G+ E E P P
Sbjct: 472 SKTEHGYPPGIGVRNSLFLLAACNLLGLLFTF-LVPESKGKSLEEMSGDAEAQEEAPPPL 530
Query: 827 ESI 835
+++
Sbjct: 531 QTV 533
>08_01_0170 -
1440908-1441072,1441539-1441581,1442155-1442619,
1442714-1444149
Length = 702
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/37 (29%), Positives = 24/37 (64%)
Frame = -1
Query: 166 RSSADWAHPISAVLPMLWPQAAPTPEPGALSPISQHA 56
+SS+ + ++A + P ++P+P P +L+PI+ H+
Sbjct: 264 KSSSSFEQKLAAKVASPPPPSSPSPPPPSLTPITSHS 300
>11_01_0307 + 2304500-2306023
Length = 507
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 401 AQLGHHLWQ*RPRKRW*DGVRRDSTDGG 484
A +GH LWQ R R+R G+ ++ T G
Sbjct: 463 AYVGHRLWQRRRRRRRAGGMEQELTSSG 490
>10_03_0023 - 7151465-7152111,7152222-7152405
Length = 276
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -1
Query: 145 HPISAVLPMLWPQAAPTPE-PGALSPISQHALYTRPVAPALPEP 17
+PI+ P L P PTP P L P++ + + P LP P
Sbjct: 190 NPITPAPPSLVPPVFPTPSPPSILPPLTPQPPPSSLIPPVLPLP 233
>08_02_0176 - 13777476-13777568,13779610-13780053
Length = 178
Score = 28.3 bits (60), Expect = 8.2
Identities = 23/80 (28%), Positives = 33/80 (41%)
Frame = +3
Query: 66 EIGESAPGSGVGAACGHSIGRTAEMGCAQSAEERAAACSKQIDR*ELEREWYSGIKRHQA 245
E GE+ G GV A G G E G A ++E AA I + G++ HQ
Sbjct: 75 EEGEAGAGDGVPAKFGRGGGDAGEEGDAAVSKEETAA---SIGAPAMNSSRLEGVQWHQC 131
Query: 246 IVVGAGESGKSTIVKQMKII 305
+ AG + ++ K I
Sbjct: 132 HWLPAGAPFRRVSGEETKFI 151
>01_06_1678 -
39095986-39096205,39096400-39096477,39096578-39096949,
39097374-39097671,39097867-39098077,39098331-39099023
Length = 623
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1
Query: 106 AAPTPEPGALSPISQHALYTRPVAPALPEPP 14
AAP P P SP+ +H + P P +P P
Sbjct: 64 AAPLPAPPTPSPVPEHLHHHPPPPPPVPPCP 94
>01_03_0117 +
12684729-12685886,12685978-12686145,12686292-12686336,
12686438-12687280
Length = 737
Score = 28.3 bits (60), Expect = 8.2
Identities = 23/74 (31%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Frame = -1
Query: 229 MPEYHSLSSSYRSICFEQAAARSSADWAHPISAVLPMLWPQAAPTPEPGALSPISQHALY 50
MP SLS ++ A S P A+ P P A P LSP + H+ +
Sbjct: 130 MPPSPSLSPPAKAPSHSHAKTPSMPPAERP--ALPPTKAPAAISPATPPQLSPANAHSTH 187
Query: 49 TRPVAPALP--EPP 14
P+LP EPP
Sbjct: 188 HHAKPPSLPPAEPP 201
>01_02_0022 +
10290033-10290407,10290497-10290848,10290923-10291070,
10291145-10291225,10291651-10291822,10292120-10292158,
10292384-10292543,10292676-10292779,10292979-10293278
Length = 576
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 606 PGRPRTGLGSKGLPAPPNKIILKDL 680
PG+ R GLG+ G+ APP +L L
Sbjct: 170 PGKLRAGLGALGVRAPPPVCVLSPL 194
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,191,779
Number of Sequences: 37544
Number of extensions: 633842
Number of successful extensions: 2565
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 2371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2559
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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