Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30868
(850 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8302| Best HMM Match : G-alpha (HMM E-Value=0) 132 3e-31
SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.) 120 1e-27
SB_30236| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 4e-11
SB_19713| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 2e-10
SB_14105| Best HMM Match : G-alpha (HMM E-Value=0) 57 2e-08
SB_58122| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 7e-06
SB_4844| Best HMM Match : G-alpha (HMM E-Value=3.6e-10) 46 3e-05
SB_9732| Best HMM Match : SH3_1 (HMM E-Value=2e-17) 36 0.031
SB_2333| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 30 2.1
SB_45391| Best HMM Match : DUF1509 (HMM E-Value=1.9) 30 2.1
SB_36409| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_45852| Best HMM Match : I-set (HMM E-Value=0) 29 3.6
SB_30396| Best HMM Match : M20_dimer (HMM E-Value=4e-08) 29 3.6
SB_29511| Best HMM Match : CHGN (HMM E-Value=0.00037) 29 4.8
SB_59144| Best HMM Match : efhand (HMM E-Value=0.093) 29 4.8
SB_2262| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_4695| Best HMM Match : SAM_1 (HMM E-Value=0.012) 29 6.3
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 29 6.3
SB_44364| Best HMM Match : Metallothionein (HMM E-Value=6.1) 28 8.3
SB_26007| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14) 28 8.3
SB_12332| Best HMM Match : PI-PLC-X (HMM E-Value=0) 28 8.3
>SB_8302| Best HMM Match : G-alpha (HMM E-Value=0)
Length = 315
Score = 132 bits (320), Expect = 3e-31
Identities = 71/126 (56%), Positives = 92/126 (73%), Gaps = 1/126 (0%)
Frame = +3
Query: 138 MGCAQSAEERAA-ACSKQIDR*ELEREWYSGIKRHQAIVVGAGESGKSTIVKQMKIIHES 314
MGC SAEERAA A SK I++ L+ E + + +++GAGESGKSTIVKQM+IIH+
Sbjct: 1 MGCTLSAEERAAIARSKAIEK-NLKLEGARAERDVKLLLLGAGESGKSTIVKQMRIIHDH 59
Query: 315 GFTNEDFKQYRPVVYSNTIQSLVAILRAMPNLGIIYGNRDRESDGKMVFDVIQRMEDTEP 494
GF+ ED+ QYRP+V+SNTI SL+ I+RAM L I + N R D K+VFDVI R +DTEP
Sbjct: 60 GFSPEDYIQYRPLVFSNTIYSLLTIIRAMDKLRIDFENDARLMDAKLVFDVIARADDTEP 119
Query: 495 FSEELS 512
F+ EL+
Sbjct: 120 FTPELT 125
Score = 48.4 bits (110), Expect = 7e-06
Identities = 41/99 (41%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
Frame = +2
Query: 515 AMKRLWADSGVQECFGRSNEYQLNDFR*IFSWTTSNRFRKQRITSP----TEQDYPKGLR 682
+M+RLW D+GVQ+CF RS EYQL D + + QRI +P TEQD LR
Sbjct: 127 SMERLWKDAGVQQCFHRSREYQLGDSAKYYLDSL------QRIGAPNYEATEQDL---LR 177
Query: 683 SQ-NDLEFVEVTFLLPKTFNFQIVPNVGGQRFREGRNWI 796
++ VEV F K +F++ +VGGQR E + WI
Sbjct: 178 TRVKTTGIVEVQFDY-KRLHFKLF-DVGGQR-SERKKWI 213
>SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 765
Score = 120 bits (290), Expect = 1e-27
Identities = 88/223 (39%), Positives = 123/223 (55%), Gaps = 1/223 (0%)
Frame = +3
Query: 138 MGCAQSAEERAAA-CSKQIDR*ELEREWYSGIKRHQAIVVGAGESGKSTIVKQMKIIHES 314
MGC SAE++AAA SK ID+ L + + + +++GAGESGKSTIVKQMKIIHE
Sbjct: 1 MGCTLSAEDKAAAERSKMIDK-NLRADGERAAREVKLLLLGAGESGKSTIVKQMKIIHEH 59
Query: 315 GFTNEDFKQYRPVVYSNTIQSLVAILRAMPNLGIIYGNRDRESDGKMVFDVIQRMEDTEP 494
G++ E+ QY+ VVYSNTIQS++AI+RAM L I +G+ DR D + +F + MED +
Sbjct: 60 GYSTEECTQYKQVVYSNTIQSMIAIIRAMGTLKIEFGHPDRADDAREMFALAGSMEDVK- 118
Query: 495 FSEELSPR*KGSGPTLAFRSALVVPTSTNSTTSAKYFPGRPRTGLGSKGLPAPPNKIILK 674
F+ EL K ++ SA Y+ LGS P + +L+
Sbjct: 119 FTAELISIMKRLWSDSGIQACFARSREYQLNDSASYYL-NALDRLGSPDY-VPTEQDVLR 176
Query: 675 DLEVKTTWNSSK*HFSFQKPSISKLFRTWAGSDSEKEEIGFHC 803
VKTT + HF+F K K+F G SE+++ HC
Sbjct: 177 -TRVKTT-GIVETHFTF-KDLHFKMFDV-GGQRSERKK-WIHC 214
>SB_30236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 353
Score = 65.7 bits (153), Expect = 4e-11
Identities = 34/96 (35%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
Frame = +3
Query: 138 MGCAQSAEERAAA-CSKQIDR*ELEREWYSGIKRHQAIVVGAGESGKSTIVKQMKIIHES 314
M C S E + + +I++ ++ ++ + + + +++G GESGKST +KQM+IIH
Sbjct: 1 MDCCLSEEAKERKRINAEIEK-QIRQDKRNQRRELKLLLLGTGESGKSTSIKQMRIIHGQ 59
Query: 315 GFTNEDFKQYRPVVYSNTIQSLVAILRAMPNLGIIY 422
G+++ED + Y P+VY N I ++ ++ RAM L I Y
Sbjct: 60 GYSDEDKRGYIPLVYQNIITAMHSLTRAMETLKIPY 95
Score = 52.8 bits (121), Expect = 3e-07
Identities = 38/94 (40%), Positives = 53/94 (56%)
Frame = +2
Query: 515 AMKRLWADSGVQECFGRSNEYQLNDFR*IFSWTTSNRFRKQRITSPTEQDYPKGLRSQND 694
A K LW+D+G+QEC+ R EYQL+D + T +R K PTEQD + +
Sbjct: 125 ATKSLWSDAGMQECYDRRREYQLSDSA-KYYLTDLDRLAKPDYL-PTEQDVLRARAPTSG 182
Query: 695 LEFVEVTFLLPKTFNFQIVPNVGGQRFREGRNWI 796
+ +E F L +T F++V +VGGQR E R WI
Sbjct: 183 I--IEYPFDL-ETIIFRMV-DVGGQR-SERRKWI 211
>SB_19713| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 507
Score = 63.7 bits (148), Expect = 2e-10
Identities = 34/105 (32%), Positives = 60/105 (57%)
Frame = +3
Query: 144 CAQSAEERAAACSKQIDR*ELEREWYSGIKRHQAIVVGAGESGKSTIVKQMKIIHESGFT 323
C E A S++ID+ ++ +E ++ + +++GAGESGKST +KQM+II+ F
Sbjct: 215 CLTQEEAEQRAQSQKIDK-QIAQEKAQLRRQVKILLLGAGESGKSTFLKQMRIIYGKDFD 273
Query: 324 NEDFKQYRPVVYSNTIQSLVAILRAMPNLGIIYGNRDRESDGKMV 458
+ ++Y+PVVYSN ++ + + A L I + D E + +
Sbjct: 274 ADALQEYKPVVYSNILKGMKVLADARRKLRIDWDAPDNEMHAERI 318
Score = 42.3 bits (95), Expect = 5e-04
Identities = 29/91 (31%), Positives = 49/91 (53%)
Frame = +2
Query: 515 AMKRLWADSGVQECFGRSNEYQLNDFR*IFSWTTSNRFRKQRITSPTEQDYPKGLRSQND 694
+++RLW D+G+++ F R E+QL D F R I PT+QD ++
Sbjct: 338 SVRRLWTDAGIRDSFDRRREFQLGDSTRYFLDHLDRICRADYI--PTKQDMLHSRKATKG 395
Query: 695 LEFVEVTFLLPKTFNFQIVPNVGGQRFREGR 787
+ VE F++ K+ F++V +VGGQR + +
Sbjct: 396 I--VEHEFMI-KSIPFKMV-DVGGQRSQRAK 422
>SB_14105| Best HMM Match : G-alpha (HMM E-Value=0)
Length = 320
Score = 56.8 bits (131), Expect = 2e-08
Identities = 24/65 (36%), Positives = 41/65 (63%)
Frame = +3
Query: 240 QAIVVGAGESGKSTIVKQMKIIHESGFTNEDFKQYRPVVYSNTIQSLVAILRAMPNLGII 419
Q + + +G SGKST +KQ+KI+++ GF ++ +YRP VY ++ I RA+ LG+
Sbjct: 42 QLLTLVSGNSGKSTFIKQLKIVYDDGFNEKERLEYRPQVYRLLAGNIAKITRAVEQLGLH 101
Query: 420 YGNRD 434
+ + D
Sbjct: 102 FNSHD 106
>SB_58122| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 48.4 bits (110), Expect = 7e-06
Identities = 20/54 (37%), Positives = 34/54 (62%)
Frame = +3
Query: 273 KSTIVKQMKIIHESGFTNEDFKQYRPVVYSNTIQSLVAILRAMPNLGIIYGNRD 434
KST +KQ+KI+++ GF ++ +YRP VY ++ I RA+ LG+ + + D
Sbjct: 2 KSTFIKQLKIVYDDGFNEKERLEYRPQVYRLLAGNIAKITRAVEQLGLHFNSHD 55
>SB_4844| Best HMM Match : G-alpha (HMM E-Value=3.6e-10)
Length = 290
Score = 46.4 bits (105), Expect = 3e-05
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = +3
Query: 255 GAGESGKSTIVKQMKIIHE-SGFTNEDFKQYRPVVYSNTIQSLVAILRAMPNL 410
GAGESGKSTIVKQM+I+H+ GFT + +Q + N +++ I AM L
Sbjct: 156 GAGESGKSTIVKQMRILHDVHGFTELEKRQKIEDIKKNIRDAILTITGAMSTL 208
Score = 38.3 bits (85), Expect = 0.008
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +2
Query: 521 KRLWADSGVQECFGRSNEYQLND 589
K LW D+GV EC+ RSNEYQL D
Sbjct: 246 KILWQDAGVLECYERSNEYQLID 268
>SB_9732| Best HMM Match : SH3_1 (HMM E-Value=2e-17)
Length = 1860
Score = 36.3 bits (80), Expect = 0.031
Identities = 26/69 (37%), Positives = 33/69 (47%)
Frame = -1
Query: 232 LMPEYHSLSSSYRSICFEQAAARSSADWAHPISAVLPMLWPQAAPTPEPGALSPISQHAL 53
+M + HS +RS E+ A S A + H A LP L P + PTP P P L
Sbjct: 116 VMSKSHSTEDFHRSA--EEQAMYSYA-YEH---AFLPPLAPSSGPTPSPPPTKPQEDPTL 169
Query: 52 YTRPVAPAL 26
YT P A A+
Sbjct: 170 YTEPCANAV 178
>SB_2333| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/20 (60%), Positives = 15/20 (75%), Gaps = 2/20 (10%)
Frame = +2
Query: 245 YCC--WCWRIGQEYYSQTDE 298
Y C W +RI +EY+SQTDE
Sbjct: 382 YLCKEWAYRIAEEYFSQTDE 401
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 30.3 bits (65), Expect = 2.1
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Frame = -1
Query: 160 SADWAHPISAVLP--MLWPQAAP-TPEPGALSPISQHALYTRP---VAPALPEP 17
+A W P A LP + PQAAP TP GA P ++ P V P + EP
Sbjct: 284 AAPWVTPHPATLPVTLFTPQAAPVTPPMGAQLPETEQPQMVAPSSTVTPPVTEP 337
>SB_45391| Best HMM Match : DUF1509 (HMM E-Value=1.9)
Length = 402
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -1
Query: 178 QAAARSSADWAHPISAVLPMLWPQAAPTPEPGALSPISQHALY 50
Q +A++S A I L + Q+AP P P L P++Q L+
Sbjct: 160 QVSAKASVPTAEQILGKLLGMASQSAPAPAPAPLYPLAQQQLF 202
>SB_36409| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1281
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +3
Query: 435 RESDGKMVFDVIQRMEDTEPFSEELS 512
R+ D K+ D+IQR ED E + +ELS
Sbjct: 305 RQQDEKLRADLIQRTEDVERYKKELS 330
>SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1584
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = -1
Query: 169 ARSSADWAHPI--SAVLPMLWPQAAPTPEPGALSPISQHALYTRPVAPALPEPP 14
A +A A P+ +A PML P AP P P A H++ + P PP
Sbjct: 1373 ATMAAPCAPPVMMAAPAPMLAPMLAPMPAPCAPPECHTHSVQVKQTHHMAPAPP 1426
>SB_45852| Best HMM Match : I-set (HMM E-Value=0)
Length = 1122
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +2
Query: 482 GHGTVQ*GALAAMKRLWADSGVQECFGRS 568
GH T+Q AL K ADSGV C RS
Sbjct: 717 GHVTIQGSALRITKTSNADSGVYACLARS 745
>SB_30396| Best HMM Match : M20_dimer (HMM E-Value=4e-08)
Length = 489
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 93 GVGAACGHSIGRTAEMGCAQSAEERAAACSKQIDR 197
G+G ACGH++ A +GCA + A + I R
Sbjct: 182 GIGHACGHNLISEAGVGCALGLKAALEASAAPIGR 216
>SB_29511| Best HMM Match : CHGN (HMM E-Value=0.00037)
Length = 955
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 691 RLGIRRSNIS-PSKNLQFPNCSERGRAAIPRRKKLDSIAFRGTLTRR 828
RLG SNIS KN++ + RG A + R K+ S G + R+
Sbjct: 380 RLG-NNSNISIEKKNIEMDSIGTRGHARVKRENKISSTISAGKVIRK 425
>SB_59144| Best HMM Match : efhand (HMM E-Value=0.093)
Length = 240
Score = 29.1 bits (62), Expect = 4.8
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 638 RITSPTEQDYPKGLRSQNDLEFVEVTFLLPKTF-NFQIVPNVGGQ 769
RITS KGL N LE ++V L P+ F N + P VGG+
Sbjct: 4 RITSQGALCIAKGLEGNNTLEVLKVRQLDPRIFYNERQRPGVGGK 48
>SB_2262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 688
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -1
Query: 142 PISAVLPMLWPQAAPTPEPGALSPISQHALYTRPVAPALPEPP 14
P+ P QA+ TP+P A +P + + +RP+ LP PP
Sbjct: 35 PLECTEPSSVLQASITPKP-ATAPTTTTQVRSRPLPTILPAPP 76
>SB_4695| Best HMM Match : SAM_1 (HMM E-Value=0.012)
Length = 1348
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 273 KSTIVKQMKIIHESGFTNEDFKQYRPVV 356
KS I + +H SG +E FKQYR V
Sbjct: 997 KSLIASRQAALHNSGKESEAFKQYRNAV 1024
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 112 PQAAPTPEPGALSPISQHALYTRPVAPALPEPP 14
P AP+P P SP ++ P+APA PP
Sbjct: 120 PSQAPSPPPPPTSPATRAPPPPPPIAPATGGPP 152
>SB_44364| Best HMM Match : Metallothionein (HMM E-Value=6.1)
Length = 202
Score = 28.3 bits (60), Expect = 8.3
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Frame = +2
Query: 632 KQRITSPTEQD---YPKGLRSQNDLEFVEVT-FLLPKTFNFQIVPNVGG 766
K++ ++ +E+D Y K LR +N + F EVT F P+ F VP+ GG
Sbjct: 3 KRKSSTESEEDDLPYRKRLRERN-VRFGEVTVFYFPRKQGFVSVPSSGG 50
>SB_26007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1145
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/65 (26%), Positives = 28/65 (43%)
Frame = +3
Query: 585 TTSAKYFPGRPRTGLGSKGLPAPPNKIILKDLEVKTTWNSSK*HFSFQKPSISKLFRTWA 764
T +PG+ +T L S P PN + E+ W + H + KP++ + TW
Sbjct: 878 TADGFIYPGK-KTSLASNVHPKKPNSA--RADELNKPWKENILHSNILKPTVDRDIFTWP 934
Query: 765 GSDSE 779
D +
Sbjct: 935 YRDRD 939
>SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14)
Length = 1197
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 210 REWYSGIKRHQAIVVGAGESGKSTIVKQMKIIHESGFTN 326
R+ I R +V+ GE+G + + +HE G+TN
Sbjct: 615 RQELLSIVRDNQVVIIVGETGSGKTTQLTQYMHEDGYTN 653
>SB_12332| Best HMM Match : PI-PLC-X (HMM E-Value=0)
Length = 1038
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = -1
Query: 217 HSLSSSYRSICFEQAAARSSADWAHPISAVLPMLWPQAAPTPEPGALSPISQHAL 53
HS+SS Y C + A + HP+S+ P+ +P A P+ P+S L
Sbjct: 410 HSMSSRYPIQC-QVATPFNVMSLPHPMSSRYPIQYPVATPSNVNSLRHPMSSRYL 463
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,765,758
Number of Sequences: 59808
Number of extensions: 661129
Number of successful extensions: 2017
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2013
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2407378809
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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