Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30867
         (743 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.0  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   2.6  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   3.4  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   4.5  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    22   4.5  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      22   4.5  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      22   4.5  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   6.0  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   6.0  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -3

Query: 195 CVFYFYLHFVLY 160
           C++YFY  F+L+
Sbjct: 237 CIYYFYYAFILF 248



 Score = 23.0 bits (47), Expect = 2.6
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -3

Query: 195 CVFYFYLHFVLY 160
           CV+YFY  F+++
Sbjct: 112 CVYYFYYAFIIF 123



 Score = 22.6 bits (46), Expect = 3.4
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = -3

Query: 195 CVFYFYLHFVLY 160
           C++YFY  F+++
Sbjct: 145 CIYYFYCAFIIF 156



 Score = 22.2 bits (45), Expect = 4.5
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = -3

Query: 195 CVFYFYLHFVLY 160
           C++YFY  F+++
Sbjct: 211 CIYYFYSAFIIF 222


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -2

Query: 439 IILFHCSIF*YVLLTISLCNLVRAKIEVFI 350
           +  FH S   YV++   L N+V   +E+FI
Sbjct: 276 VFFFHLSDVRYVMVVYLLKNVVLYGLELFI 305


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = -1

Query: 308 YEVFYWQKLLNLPILLFLWS 249
           Y+++ W   L + +L  LW+
Sbjct: 546 YQLYCWSSFLKISVLQSLWA 565


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = +3

Query: 435 MITL*LRLGIYHWLEIENKELPLKAPTKMKTEILTV 542
           ++TL  RLGI  +L  E++ L +     +K  ++ +
Sbjct: 129 LVTLNYRLGILGFLRFEDQSLGVPGNAGLKDMVMAL 164


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = +3

Query: 435 MITL*LRLGIYHWLEIENKELPLKAPTKMKTEILTV 542
           ++TL  RLGI  +L  E++ L +     +K  ++ +
Sbjct: 131 LVTLNYRLGILGFLRFEDQSLGVPGNAGLKDMVMAL 166


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = +3

Query: 435 MITL*LRLGIYHWLEIENKELPLKAPTKMKTEILTV 542
           ++TL  RLGI  +L  E++ L +     +K  ++ +
Sbjct: 129 LVTLNYRLGILGFLRFEDQSLGVPGNAGLKDMVMAL 164


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = +3

Query: 435 MITL*LRLGIYHWLEIENKELPLKAPTKMKTEILTV 542
           ++TL  RLGI  +L  E++ L +     +K  ++ +
Sbjct: 131 LVTLNYRLGILGFLRFEDQSLGVPGNAGLKDMVMAL 166


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = -1

Query: 617 LGFNKVKINSCCIIINHVKRIFSGLNCK 534
           +GF KVK N   +++  V+ + +   C+
Sbjct: 623 VGFLKVKENEITLLVATVRHVMAPSTCQ 650


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +2

Query: 428 KEDDYFVAPTGNIP 469
           + DD+  +P+GN+P
Sbjct: 102 RTDDWLSSPSGNVP 115


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,197
Number of Sequences: 336
Number of extensions: 4160
Number of successful extensions: 18
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)