Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30867
         (743 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2411|AAO41185.1|  148|Drosophila melanogaster CG33649-P...    81   2e-15
AE014134-1754|AAF52849.2| 1317|Drosophila melanogaster CG13131-P...    29   5.1  
AF017777-11|AAC28411.1|  574|Drosophila melanogaster misato prot...    29   8.8  
AE014298-3139|AAF50817.1|  574|Drosophila melanogaster CG1424-PA...    29   8.8  

>AE014134-2411|AAO41185.1|  148|Drosophila melanogaster CG33649-PA,
           isoform A protein.
          Length = 148

 Score = 81.0 bits (191), Expect = 2e-15
 Identities = 33/73 (45%), Positives = 51/73 (69%)
 Frame = +2

Query: 254 KGIKVLEDSITFANKILHINTDNIEPLYXXXXXXXXXXRPDKITQGNCQKDILKNATVKE 433
           + +  L+ SI FA+KI HINT+++ PLY          R D++T+G+C+ ++L+NA V +
Sbjct: 74  RALATLKSSIQFADKIAHINTEHVRPLYTVLEHQQLQLRNDQVTEGDCRAEVLRNAKVTD 133

Query: 434 DDYFVAPTGNIPL 472
           +DYFV+P GNIPL
Sbjct: 134 EDYFVSPPGNIPL 146



 Score = 36.3 bits (80), Expect = 0.044
 Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
 Frame = +3

Query: 135 SKVPSKPV-STVQNEDKNKIRIDPSTITLLERLSLVKYDTPK 257
           +KVP  PV S   +   ++I+ID  TI LLERLSLV  D+ +
Sbjct: 33  TKVPQTPVDSKFPDTSASEIQIDTKTIQLLERLSLVDLDSER 74


>AE014134-1754|AAF52849.2| 1317|Drosophila melanogaster CG13131-PA
           protein.
          Length = 1317

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
 Frame = +2

Query: 377 KITQGNCQKDI---LKNATVKEDDYFVAPTGNIPLARNRKQRTSFEGTNKNEN*NSYSLN 547
           K + GNC  D    L++     +D FV    ++ L  N     S   +NK  N N YS  
Sbjct: 440 KSSNGNCDDDKIPELEDINKPINDMFVEDPESVSLKSNVSNEHSVFSSNKTNNYNDYSKP 499

Query: 548 LKKFFS 565
           + K  S
Sbjct: 500 VSKTLS 505


>AF017777-11|AAC28411.1|  574|Drosophila melanogaster misato
           protein.
          Length = 574

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +2

Query: 398 QKDILKNATVKEDDYFVAPTGN 463
           Q+D+LKNA V E +Y +A T N
Sbjct: 138 QRDLLKNAVVPEKNYQLAATAN 159


>AE014298-3139|AAF50817.1|  574|Drosophila melanogaster CG1424-PA
           protein.
          Length = 574

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +2

Query: 398 QKDILKNATVKEDDYFVAPTGN 463
           Q+D+LKNA V E +Y +A T N
Sbjct: 138 QRDLLKNAVVPEKNYQLAATAN 159


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,840,530
Number of Sequences: 53049
Number of extensions: 636774
Number of successful extensions: 1291
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1291
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)