Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30867
         (743 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL161712-4|CAC35907.1|  175|Caenorhabditis elegans Hypothetical ...    39   0.003
AL023856-6|CAC15864.1|  332|Caenorhabditis elegans Hypothetical ...    29   4.6  
Z81494-5|CAB04053.1|  419|Caenorhabditis elegans Hypothetical pr...    28   6.1  
CU457743-2|CAM36365.1|  695|Caenorhabditis elegans Hypothetical ...    28   6.1  
CU457743-1|CAM36364.1|  692|Caenorhabditis elegans Hypothetical ...    28   6.1  
Z82283-4|CAB05286.1|  689|Caenorhabditis elegans Hypothetical pr...    28   8.0  
L23646-7|AAA28038.3|  471|Caenorhabditis elegans Hypothetical pr...    28   8.0  
L23646-6|AAU87821.1|  469|Caenorhabditis elegans Hypothetical pr...    28   8.0  

>AL161712-4|CAC35907.1|  175|Caenorhabditis elegans Hypothetical
           protein Y66D12A.7 protein.
          Length = 175

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 18/68 (26%), Positives = 35/68 (51%)
 Frame = +2

Query: 269 LEDSITFANKILHINTDNIEPLYXXXXXXXXXXRPDKITQGNCQKDILKNATVKEDDYFV 448
           L  SI  A ++  ++ + +EP++            D        +++ +NA+++ DD+FV
Sbjct: 73  LRSSIRVAKRLELVDVEGVEPMHTVWEDQECPTFEDVEEDPLPIEEVFRNASLRFDDFFV 132

Query: 449 APTGNIPL 472
            P GN+PL
Sbjct: 133 TPPGNLPL 140


>AL023856-6|CAC15864.1|  332|Caenorhabditis elegans Hypothetical
           protein Y94A7B.9 protein.
          Length = 332

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
 Frame = +2

Query: 8   FIIFFFNKLHKHKRI-YLIINYAISIYRLKSCYNS----KNFVQELLFKSTFQACQYST 169
           F++F    L ++ R  +L++NYA+++    S Y      +N  ++ LFKS  QAC+  T
Sbjct: 119 FVLFGNKGLWQYLRYPFLMLNYALALVYCISIYIEVPVDQNKARQFLFKSHPQACKVIT 177


>Z81494-5|CAB04053.1|  419|Caenorhabditis elegans Hypothetical
           protein F02E9.7 protein.
          Length = 419

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = -2

Query: 478 SSQWYIPSRSYKVIILFHCSIF*YVLL-TISLC 383
           S +WY PS  YK  + F+ +   ++++ TISLC
Sbjct: 179 SKKWYFPSLYYKKSVEFNGTSIDFLMIDTISLC 211


>CU457743-2|CAM36365.1|  695|Caenorhabditis elegans Hypothetical
           protein K09E10.2 protein.
          Length = 695

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -2

Query: 310 YMKYFIGKSY*IFQYFYSFGVSYFTS 233
           Y+  F   S  ++QYF S G SYFTS
Sbjct: 646 YLPLFWNNSTHLYQYFDSRGFSYFTS 671


>CU457743-1|CAM36364.1|  692|Caenorhabditis elegans Hypothetical
           protein K09E10.1 protein.
          Length = 692

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -2

Query: 310 YMKYFIGKSY*IFQYFYSFGVSYFTS 233
           Y+  F   S  ++QYF S G SYFTS
Sbjct: 643 YLPLFWNNSTHLYQYFDSRGFSYFTS 668


>Z82283-4|CAB05286.1|  689|Caenorhabditis elegans Hypothetical
           protein T23G4.4 protein.
          Length = 689

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -2

Query: 310 YMKYFIGKSY*IFQYFYSFGVSYFTS 233
           Y+  F  K+   FQYF + G SYFTS
Sbjct: 641 YLPEFWNKTMNAFQYFDARGFSYFTS 666


>L23646-7|AAA28038.3|  471|Caenorhabditis elegans Hypothetical
           protein F44E2.7a protein.
          Length = 471

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 150 KPVSTVQNEDKNKIRIDPSTI 212
           KP S++    KN +R+DPST+
Sbjct: 3   KPTSSLLQRYKNNVRVDPSTL 23


>L23646-6|AAU87821.1|  469|Caenorhabditis elegans Hypothetical
           protein F44E2.7d protein.
          Length = 469

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 150 KPVSTVQNEDKNKIRIDPSTI 212
           KP S++    KN +R+DPST+
Sbjct: 3   KPTSSLLQRYKNNVRVDPSTL 23


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,722,616
Number of Sequences: 27780
Number of extensions: 366951
Number of successful extensions: 899
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)