Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30866
(878 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC035005-1|AAH35005.1| 770|Homo sapiens hypothetical protein FL... 107 4e-23
BC034468-1|AAH34468.1| 770|Homo sapiens FLJ11171 protein protein. 107 5e-23
AK002033-1|BAA92047.1| 770|Homo sapiens protein ( Homo sapiens ... 107 5e-23
AF458590-1|AAM49718.1| 340|Homo sapiens hypothetical protein pr... 107 5e-23
AK023183-1|BAB14452.1| 586|Homo sapiens protein ( Homo sapiens ... 90 8e-18
X54673-1|CAA38484.1| 599|Homo sapiens GABA transporter protein. 31 4.2
BC033904-1|AAH33904.1| 599|Homo sapiens solute carrier family 6... 31 4.2
BC033965-1|AAH33965.1| 169|Homo sapiens NDUFA12-like protein. 30 9.6
BC022869-1|AAH22869.1| 64|Homo sapiens Unknown (protein for IM... 30 9.6
BC001753-1|AAH01753.2| 169|Homo sapiens NDUFA12-like protein. 30 9.6
AB183433-1|BAD91205.1| 169|Homo sapiens Myc-induced mitochondri... 30 9.6
>BC035005-1|AAH35005.1| 770|Homo sapiens hypothetical protein
FLJ11171 protein.
Length = 770
Score = 107 bits (258), Expect = 4e-23
Identities = 47/75 (62%), Positives = 56/75 (74%)
Frame = +2
Query: 14 KMVSLHLCEAPGAFITSLNHYLKLNHPGIQWTWVANTLNPYYEGNSPSSMISDDRFMFHT 193
K+ SLHLCEAPGAFI SLNHYLK + W+WVANTLNPY+E N MI DDR + +T
Sbjct: 137 KLNSLHLCEAPGAFIASLNHYLKSHRYPCHWSWVANTLNPYHEANDDLMMIMDDRLIANT 196
Query: 194 LDNWHFGVDNTGNLM 238
L W+FG DNTG++M
Sbjct: 197 LHWWYFGPDNTGDIM 211
Score = 90.2 bits (214), Expect = 8e-18
Identities = 38/77 (49%), Positives = 53/77 (68%)
Frame = +1
Query: 277 SLGKVMLVTADGSIDCLQAPDAQEEATSLLHYCEITTALQALSQGGTLIFKLFTIFEHST 456
S+ V LVTADGS DC P QE S LHYCE+ TAL L GG+ + K+FT+FEH +
Sbjct: 225 SMATVHLVTADGSFDCQGNPGEQEALVSSLHYCEVVTALTTLGNGGSFVLKMFTMFEHCS 284
Query: 457 VSLLYLINHLFSEVNIY 507
++L+YL+N F +V+++
Sbjct: 285 INLMYLLNCCFDQVHVF 301
Score = 49.2 bits (112), Expect = 2e-05
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +3
Query: 507 QPVTSRQGNSEVYAVCLNYKGMSILEKFTPVLMSAYGN-GTIWEILSLFRLDDIPDNIFE 683
+P TS+ GNSEVY VCL+YKG E P+L N GT + +LF IPD+ F
Sbjct: 302 KPATSKAGNSEVYVVCLHYKGR---EAIHPLLSKMTLNFGTEMKRKALFPHHVIPDS-FL 357
Query: 684 GKSKECACYFGSIQCPVI 737
+ +EC +F Q I
Sbjct: 358 KRHEECCVFFHKYQLETI 375
>BC034468-1|AAH34468.1| 770|Homo sapiens FLJ11171 protein protein.
Length = 770
Score = 107 bits (257), Expect = 5e-23
Identities = 47/75 (62%), Positives = 56/75 (74%)
Frame = +2
Query: 14 KMVSLHLCEAPGAFITSLNHYLKLNHPGIQWTWVANTLNPYYEGNSPSSMISDDRFMFHT 193
K+ SLHLCEAPGAFI SLNHYLK + W+WVANTLNPY+E N MI DDR + +T
Sbjct: 137 KLNSLHLCEAPGAFIASLNHYLKSHRFPCHWSWVANTLNPYHEANDDLMMIMDDRLIANT 196
Query: 194 LDNWHFGVDNTGNLM 238
L W+FG DNTG++M
Sbjct: 197 LHWWYFGPDNTGDIM 211
Score = 90.2 bits (214), Expect = 8e-18
Identities = 38/77 (49%), Positives = 53/77 (68%)
Frame = +1
Query: 277 SLGKVMLVTADGSIDCLQAPDAQEEATSLLHYCEITTALQALSQGGTLIFKLFTIFEHST 456
S+ V LVTADGS DC P QE S LHYCE+ TAL L GG+ + K+FT+FEH +
Sbjct: 225 SMATVHLVTADGSFDCQGNPGEQEALVSSLHYCEVVTALTTLGNGGSFVLKMFTMFEHCS 284
Query: 457 VSLLYLINHLFSEVNIY 507
++L+YL+N F +V+++
Sbjct: 285 INLMYLLNCCFDQVHVF 301
Score = 49.2 bits (112), Expect = 2e-05
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +3
Query: 507 QPVTSRQGNSEVYAVCLNYKGMSILEKFTPVLMSAYGN-GTIWEILSLFRLDDIPDNIFE 683
+P TS+ GNSEVY VCL+YKG E P+L N GT + +LF IPD+ F
Sbjct: 302 KPATSKAGNSEVYVVCLHYKGR---EAIHPLLSKMTLNFGTEMKRKALFPHHVIPDS-FL 357
Query: 684 GKSKECACYFGSIQCPVI 737
+ +EC +F Q I
Sbjct: 358 KRHEECCVFFHKYQLETI 375
>AK002033-1|BAA92047.1| 770|Homo sapiens protein ( Homo sapiens
cDNA FLJ11171 fis, clone PLACE1007317, weakly similar to
Drosophila melanogaster Adrift mRNA. ).
Length = 770
Score = 107 bits (257), Expect = 5e-23
Identities = 47/75 (62%), Positives = 56/75 (74%)
Frame = +2
Query: 14 KMVSLHLCEAPGAFITSLNHYLKLNHPGIQWTWVANTLNPYYEGNSPSSMISDDRFMFHT 193
K+ SLHLCEAPGAFI SLNHYLK + W+WVANTLNPY+E N MI DDR + +T
Sbjct: 137 KLNSLHLCEAPGAFIASLNHYLKSHRFPCHWSWVANTLNPYHEANDDLMMIMDDRLIANT 196
Query: 194 LDNWHFGVDNTGNLM 238
L W+FG DNTG++M
Sbjct: 197 LHWWYFGPDNTGDIM 211
Score = 90.2 bits (214), Expect = 8e-18
Identities = 38/77 (49%), Positives = 53/77 (68%)
Frame = +1
Query: 277 SLGKVMLVTADGSIDCLQAPDAQEEATSLLHYCEITTALQALSQGGTLIFKLFTIFEHST 456
S+ V LVTADGS DC P QE S LHYCE+ TAL L GG+ + K+FT+FEH +
Sbjct: 225 SMATVHLVTADGSFDCQGNPGEQEALVSSLHYCEVVTALTTLGNGGSFVLKMFTMFEHCS 284
Query: 457 VSLLYLINHLFSEVNIY 507
++L+YL+N F +V+++
Sbjct: 285 INLMYLLNCCFDQVHVF 301
Score = 49.2 bits (112), Expect = 2e-05
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +3
Query: 507 QPVTSRQGNSEVYAVCLNYKGMSILEKFTPVLMSAYGN-GTIWEILSLFRLDDIPDNIFE 683
+P TS+ GNSEVY VCL+YKG E P+L N GT + +LF IPD+ F
Sbjct: 302 KPATSKAGNSEVYVVCLHYKGR---EAIHPLLSKMTLNFGTEMKRKALFPHHVIPDS-FL 357
Query: 684 GKSKECACYFGSIQCPVI 737
+ +EC +F Q I
Sbjct: 358 KRHEECCVFFHKYQLETI 375
>AF458590-1|AAM49718.1| 340|Homo sapiens hypothetical protein
protein.
Length = 340
Score = 107 bits (257), Expect = 5e-23
Identities = 47/75 (62%), Positives = 55/75 (73%)
Frame = +2
Query: 14 KMVSLHLCEAPGAFITSLNHYLKLNHPGIQWTWVANTLNPYYEGNSPSSMISDDRFMFHT 193
K+ SLHLCEAPGAFI SLNHYLK + W+WVANTLNPY+E N MI DDR + +T
Sbjct: 137 KLNSLHLCEAPGAFIASLNHYLKSHRFPCHWSWVANTLNPYHEANDDLMMIMDDRLIANT 196
Query: 194 LDNWHFGVDNTGNLM 238
L WH G DNTG++M
Sbjct: 197 LHWWHLGPDNTGDIM 211
Score = 90.2 bits (214), Expect = 8e-18
Identities = 38/77 (49%), Positives = 53/77 (68%)
Frame = +1
Query: 277 SLGKVMLVTADGSIDCLQAPDAQEEATSLLHYCEITTALQALSQGGTLIFKLFTIFEHST 456
S+ V LVTADGS DC P QE S LHYCE+ TAL L GG+ + K+FT+FEH +
Sbjct: 225 SMATVHLVTADGSFDCQGNPGEQEALVSSLHYCEVVTALTTLGNGGSFVLKMFTMFEHCS 284
Query: 457 VSLLYLINHLFSEVNIY 507
++L+YL+N F +V+++
Sbjct: 285 INLMYLLNCCFDQVHVF 301
Score = 34.7 bits (76), Expect = 0.45
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +3
Query: 507 QPVTSRQGNSEVYAVCLNYKG 569
+P TS+ GNSEVY V L+YKG
Sbjct: 302 KPATSKAGNSEVYVVSLHYKG 322
>AK023183-1|BAB14452.1| 586|Homo sapiens protein ( Homo sapiens
cDNA FLJ13121 fis, clone NT2RP3002687. ).
Length = 586
Score = 90.2 bits (214), Expect = 8e-18
Identities = 38/77 (49%), Positives = 53/77 (68%)
Frame = +1
Query: 277 SLGKVMLVTADGSIDCLQAPDAQEEATSLLHYCEITTALQALSQGGTLIFKLFTIFEHST 456
S+ V LVTADGS DC P QE S LHYCE+ TAL L GG+ + K+FT+FEH +
Sbjct: 41 SMATVHLVTADGSFDCQGNPGEQEALVSSLHYCEVVTALTTLGNGGSFVLKMFTMFEHCS 100
Query: 457 VSLLYLINHLFSEVNIY 507
++L+YL+N F +V+++
Sbjct: 101 INLMYLLNCCFDQVHVF 117
Score = 49.2 bits (112), Expect = 2e-05
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +3
Query: 507 QPVTSRQGNSEVYAVCLNYKGMSILEKFTPVLMSAYGN-GTIWEILSLFRLDDIPDNIFE 683
+P TS+ GNSEVY VCL+YKG E P+L N GT + +LF IPD+ F
Sbjct: 118 KPATSKAGNSEVYVVCLHYKGR---EAIHPLLSKMTLNFGTEMKRKALFPHHVIPDS-FL 173
Query: 684 GKSKECACYFGSIQCPVI 737
+ +EC +F Q I
Sbjct: 174 KRHEECCVFFHKYQLETI 191
Score = 37.5 bits (83), Expect = 0.063
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +2
Query: 161 MISDDRFMFHTLDNWHFGVDNTGNLM 238
MI DDR + +TL W+FG DNTG++M
Sbjct: 2 MIMDDRLIANTLHWWYFGPDNTGDIM 27
>X54673-1|CAA38484.1| 599|Homo sapiens GABA transporter protein.
Length = 599
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 391 LQALSQGGTLIFKLFTIFEHSTVSLLYLI 477
L ++QGG +FKLF + S +SLL+L+
Sbjct: 436 LSNITQGGIYVFKLFDYYSASGMSLLFLV 464
>BC033904-1|AAH33904.1| 599|Homo sapiens solute carrier family 6
(neurotransmitter transporter, GABA), member 1 protein.
Length = 599
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 391 LQALSQGGTLIFKLFTIFEHSTVSLLYLI 477
L ++QGG +FKLF + S +SLL+L+
Sbjct: 436 LSNITQGGIYVFKLFDYYSASGMSLLFLV 464
>BC033965-1|AAH33965.1| 169|Homo sapiens NDUFA12-like protein.
Length = 169
Score = 30.3 bits (65), Expect = 9.6
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 580 WRSLRRYSCQHMGTELYGKFYHY 648
WRSL R +H+GT+ +G Y+Y
Sbjct: 12 WRSLSREVKEHVGTDQFGNKYYY 34
>BC022869-1|AAH22869.1| 64|Homo sapiens Unknown (protein for
IMAGE:3828419) protein.
Length = 64
Score = 30.3 bits (65), Expect = 9.6
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 580 WRSLRRYSCQHMGTELYGKFYHY 648
WRSL R +H+GT+ +G Y+Y
Sbjct: 12 WRSLSREVKEHVGTDQFGNKYYY 34
>BC001753-1|AAH01753.2| 169|Homo sapiens NDUFA12-like protein.
Length = 169
Score = 30.3 bits (65), Expect = 9.6
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 580 WRSLRRYSCQHMGTELYGKFYHY 648
WRSL R +H+GT+ +G Y+Y
Sbjct: 12 WRSLSREVKEHVGTDQFGNKYYY 34
>AB183433-1|BAD91205.1| 169|Homo sapiens Myc-induced mitochondria
protein protein.
Length = 169
Score = 30.3 bits (65), Expect = 9.6
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 580 WRSLRRYSCQHMGTELYGKFYHY 648
WRSL R +H+GT+ +G Y+Y
Sbjct: 12 WRSLSREVKEHVGTDQFGNKYYY 34
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,016,676
Number of Sequences: 237096
Number of extensions: 3287355
Number of successful extensions: 5815
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5815
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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