Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30865
(785 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 174 2e-42
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 157 3e-37
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 146 5e-34
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 123 6e-27
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 122 8e-27
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 122 1e-26
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 101 2e-20
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 97 6e-19
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 92 2e-17
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 91 4e-17
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 87 4e-16
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 87 4e-16
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 85 1e-15
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 75 2e-12
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 73 6e-12
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 67 4e-10
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 66 1e-09
UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole geno... 55 2e-06
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 48 4e-04
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 47 5e-04
UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyroba... 47 6e-04
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 46 8e-04
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 46 0.001
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 42 0.023
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 41 0.031
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 40 0.093
UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methan... 40 0.093
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 39 0.12
UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n... 38 0.29
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 37 0.50
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 37 0.50
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 37 0.66
UniRef50_Q8WS94 Cluster: KAL-1; n=3; Caenorhabditis|Rep: KAL-1 -... 35 2.7
UniRef50_A5ZLU4 Cluster: Sensor protein; n=1; Bacteroides caccae... 34 3.5
UniRef50_A7EBC3 Cluster: Putative uncharacterized protein; n=1; ... 34 3.5
UniRef50_A6RL44 Cluster: Putative uncharacterized protein; n=1; ... 34 3.5
UniRef50_A4VEU4 Cluster: Putative uncharacterized protein; n=1; ... 34 4.6
UniRef50_A0IK20 Cluster: Transcriptional regulator, LacI family;... 33 6.1
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 33 6.1
UniRef50_Q7SAV9 Cluster: Predicted protein; n=1; Neurospora cras... 33 8.1
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 174 bits (424), Expect = 2e-42
Identities = 85/141 (60%), Positives = 105/141 (74%)
Frame = +2
Query: 212 IEGKSFRSFPG*STTDTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 391
++G+ F + DAERSFRKF+L+AE V GR+VL NFHGM LTTDKLR MVKKWQ
Sbjct: 62 LKGRVFEVSLADLQNEPDAERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVKKWQ 121
Query: 392 TLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQTLRSEQSERKCVKSLHATSLT 571
TLIE ++DVKTTDG++LRVFCIGFT KDS+SQRKTCYAQ + + K + +
Sbjct: 122 TLIECSVDVKTTDGFMLRVFCIGFTIKDSMSQRKTCYAQHSQIKNIRAKMTAIIKREITS 181
Query: 572 SELREVVNKLIPDSIAKDIEK 634
++L+ VV KL+PDSIAKDIEK
Sbjct: 182 TDLKGVVEKLLPDSIAKDIEK 202
Score = 107 bits (258), Expect = 2e-22
Identities = 49/55 (89%), Positives = 52/55 (94%)
Frame = +3
Query: 90 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQ 254
+VDPFTRKDWYDVKAP+MF RQVG TLVNRTQGTKIAS+GLKGRVFEVSLADLQ
Sbjct: 21 VVDPFTRKDWYDVKAPNMFKNRQVGKTLVNRTQGTKIASDGLKGRVFEVSLADLQ 75
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 157 bits (381), Expect = 3e-37
Identities = 75/122 (61%), Positives = 94/122 (77%)
Frame = +2
Query: 269 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 448
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 449 FCIGFTNKDSLSQRKTCYAQTLRSEQSERKCVKSLHATSLTSELREVVNKLIPDSIAKDI 628
FC+GFT K + RKT YAQ + Q +K ++ + T++L+EVVNKLIPDSI KDI
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDI 197
Query: 629 EK 634
EK
Sbjct: 198 EK 199
Score = 99.5 bits (237), Expect = 8e-20
Identities = 44/55 (80%), Positives = 51/55 (92%)
Frame = +3
Query: 90 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQ 254
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQ 75
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 146 bits (354), Expect = 5e-34
Identities = 69/124 (55%), Positives = 91/124 (73%)
Frame = +2
Query: 263 DAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVL 442
D ++++RK RL AE VQGRNVL NF GMD TTDKLR +V+KWQTLIEA++DVKTTD Y L
Sbjct: 471 DEDQAYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTL 530
Query: 443 RVFCIGFTNKDSLSQRKTCYAQTLRSEQSERKCVKSLHATSLTSELREVVNKLIPDSIAK 622
R+FCI FT K +KTCYAQ+ + Q RK + + + + +L+E+V K IP+SI +
Sbjct: 531 RLFCIAFTKKRVNQNKKTCYAQSSQIRQIRRKMREIMTNMATSCDLKELVKKFIPESIGR 590
Query: 623 DIEK 634
+IEK
Sbjct: 591 EIEK 594
Score = 93.9 bits (223), Expect = 4e-18
Identities = 42/53 (79%), Positives = 47/53 (88%)
Frame = +3
Query: 96 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQ 254
DPF +KDWYD+KAPS+F R VG TLV+RTQGTKIASEGLK RVFE+SLADLQ
Sbjct: 417 DPFAKKDWYDIKAPSVFEVRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQ 469
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 123 bits (296), Expect = 6e-27
Identities = 63/116 (54%), Positives = 77/116 (66%)
Frame = +2
Query: 278 FRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 457
FRKF+L E VQGR+ L NFHGMDLT DKL MV KWQ+ IEA++DVKTTDGY LR F I
Sbjct: 7 FRKFKLQVEDVQGRHCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFVI 66
Query: 458 GFTNKDSLSQRKTCYAQTLRSEQSERKCVKSLHATSLTSELREVVNKLIPDSIAKD 625
FT K Q+ YAQT R ++ + V+ + +L+ VV KLIPDSI +D
Sbjct: 67 AFTKKQE-DQKSHAYAQTTRIKKLRAEIVEVVQREVARCDLKSVVQKLIPDSIGQD 121
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 122 bits (295), Expect = 8e-27
Identities = 57/124 (45%), Positives = 83/124 (66%)
Frame = +2
Query: 263 DAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVL 442
D + +FRK +L + VQG+N L NFHG+D T+DKLR +V+KWQ+LIEAN+ VKTTD Y+L
Sbjct: 76 DEDHAFRKIKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLL 135
Query: 443 RVFCIGFTNKDSLSQRKTCYAQTLRSEQSERKCVKSLHATSLTSELREVVNKLIPDSIAK 622
R+F I T + +KT YA + + RK + + + T L+++ NKLIP+ I +
Sbjct: 136 RLFAIAVTKRRPNQIKKTTYAASSQIRAIRRKMTEIIQREASTCTLQQLTNKLIPEVIGR 195
Query: 623 DIEK 634
+IEK
Sbjct: 196 EIEK 199
Score = 81.4 bits (192), Expect = 2e-14
Identities = 36/53 (67%), Positives = 43/53 (81%)
Frame = +3
Query: 96 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQ 254
DPF RKDWY +KAP+ F+ R VG TLVNR+ G K A++ LKGR+FEVSLADLQ
Sbjct: 22 DPFARKDWYGIKAPAPFNIRDVGKTLVNRSSGMKNANDALKGRIFEVSLADLQ 74
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 122 bits (294), Expect = 1e-26
Identities = 62/118 (52%), Positives = 81/118 (68%)
Frame = +2
Query: 263 DAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVL 442
D + FRK +L AE V+GRNVL NF+GMDLT+DKLR ++ KW TLIE +DVKTTDGY L
Sbjct: 75 DESQVFRKIKLRAEEVEGRNVLTNFYGMDLTSDKLRSLIHKWSTLIECFVDVKTTDGYFL 134
Query: 443 RVFCIGFTNKDSLSQRKTCYAQTLRSEQSERKCVKSLHATSLTSELREVVNKLIPDSI 616
RVF I FT K ++KT YA+T R + +K V L T +++L+ VV+ LI S+
Sbjct: 135 RVFAICFTKKGESQKKKTSYAKTSRVKAIRKKMVDILTETVSSNDLKTVVDYLIGVSL 192
Score = 81.4 bits (192), Expect = 2e-14
Identities = 39/58 (67%), Positives = 48/58 (82%), Gaps = 4/58 (6%)
Frame = +3
Query: 93 VDPFTRKDWYDVKAPSMFSK----RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQ 254
VDPFTRK+WY V+AP+ F K +VG T VNRTQGTK+AS+GLKGRV+EVSLAD++
Sbjct: 16 VDPFTRKEWYVVRAPTQFFKSPADNKVGFTPVNRTQGTKLASDGLKGRVYEVSLADMK 73
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 101 bits (242), Expect = 2e-20
Identities = 55/152 (36%), Positives = 82/152 (53%), Gaps = 3/152 (1%)
Frame = +2
Query: 188 GNENCFGRIEGKSFRSFPG*STTDTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKL 367
GN I+G+ S D ++++RK +L+ + V GRN +F+G+D+T D+L
Sbjct: 55 GNRIASEEIKGRVVESTLA-DLKDNSNDKAWRKVKLVIDEVDGRNAKTSFYGLDITRDRL 113
Query: 368 RWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSL---SQRKTCYAQTLRSEQSERK 538
M++KWQTLIEA +D KT DGY++RVF + FT K S S TCYA++ + RK
Sbjct: 114 CSMIRKWQTLIEARVDCKTNDGYIIRVFTLAFTKKTSAGKQSSTSTCYAKSSQVRAIRRK 173
Query: 539 CVKSLHATSLTSELREVVNKLIPDSIAKDIEK 634
+ + + E LI + K IEK
Sbjct: 174 INTFITNEAAKLGIAEFSKNLIGEDYTKKIEK 205
Score = 68.5 bits (160), Expect = 2e-10
Identities = 29/54 (53%), Positives = 40/54 (74%)
Frame = +3
Query: 93 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQ 254
+DP +RK+WYD +AP FS + G TLV ++ G +IASE +KGRV E +LADL+
Sbjct: 23 IDPLSRKEWYDFRAPIPFSSKSFGKTLVTKSSGNRIASEEIKGRVVESTLADLK 76
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 96.7 bits (230), Expect = 6e-19
Identities = 50/115 (43%), Positives = 76/115 (66%), Gaps = 1/115 (0%)
Frame = +2
Query: 287 FRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 466
++ E V G++ L FHG+ LTTDKLR +VKKW TLIE ++DVKTTDG+++R+FCIGFT
Sbjct: 86 YKFKCEDVNGKDCLMIFHGLKLTTDKLRSIVKKWCTLIETSVDVKTTDGHLIRIFCIGFT 145
Query: 467 NKDSLSQRKTCYAQTLRSEQSERKCVKSLHATSLTS-ELREVVNKLIPDSIAKDI 628
++ S +KT YA++ + ++ RK + +L S EL + V+ L + K +
Sbjct: 146 SRKSNQIKKTSYAKSAQIKKI-RKIMNNLITKEAASRELTQFVDYLKKTNFQKKL 199
Score = 75.8 bits (178), Expect = 1e-12
Identities = 33/54 (61%), Positives = 43/54 (79%)
Frame = +3
Query: 90 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADL 251
I +PF++K+WY+VK P F +R VG +VN+T GT+IASE LKGRV EV+LADL
Sbjct: 22 IAEPFSKKEWYNVKVPKNFKRRTVGQIVVNKTAGTRIASEQLKGRVVEVNLADL 75
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 91.9 bits (218), Expect = 2e-17
Identities = 51/119 (42%), Positives = 77/119 (64%), Gaps = 1/119 (0%)
Frame = +2
Query: 281 RKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIG 460
RKF+LI E ++G+N L N +GMDLT DK V KWQ ++EA+ DVKT D Y+L +FC+G
Sbjct: 67 RKFKLITEDMRGKNGLTNSYGMDLTWDKRCNKVIKWQ-MVEAHADVKTADYYLLCLFCVG 125
Query: 461 F-TNKDSLSQRKTCYAQTLRSEQSERKCVKSLHATSLTSELREVVNKLIPDSIAKDIEK 634
+ TN + R+ AQ + Q ++ + ++L+EV+NKL+PD++ KD+EK
Sbjct: 126 YTTNVTTRYARQLVCAQYQQVHQIWLITIQIM--DQRRTDLKEVLNKLVPDNVGKDVEK 182
Score = 56.8 bits (131), Expect = 6e-07
Identities = 29/49 (59%), Positives = 34/49 (69%)
Frame = +3
Query: 108 RKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQ 254
+KD YDVKA +MF+ R +G T V R Q TK+ S GL G VFE SLA LQ
Sbjct: 12 KKDRYDVKALTMFNVRNIGKTQVLRKQETKMVSVGLNGLVFEASLASLQ 60
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 90.6 bits (215), Expect = 4e-17
Identities = 43/143 (30%), Positives = 72/143 (50%)
Frame = +2
Query: 173 CQPYPGNENCFGRIEGKSFRSFPG*STTDTDAERSFRKFRLIAEYVQGRNVLCNFHGMDL 352
C G + G+ F + E ++RK R + VQGRN+L FH M++
Sbjct: 49 CNKTQGTRIAADVLRGRVFEANLADLNQSAGEEEAYRKVRFTVQEVQGRNLLTQFHSMEV 108
Query: 353 TTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQTLRSEQSE 532
TTDK+ +++KW T +E ++VKT DGY +R+F + FT + Q + CYA+ +
Sbjct: 109 TTDKMANLLRKWCTTMETTVEVKTADGYTMRLFVVAFTKPQANQQSRNCYAKQRLVKWLR 168
Query: 533 RKCVKSLHATSLTSELREVVNKL 601
+ K + +++E V+ L
Sbjct: 169 MRITKMIKRRLSKVQIKEAVSLL 191
Score = 70.1 bits (164), Expect = 6e-11
Identities = 30/52 (57%), Positives = 40/52 (76%)
Frame = +3
Query: 96 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADL 251
+ RK+WYDV AP+ F KRQ T+ N+TQGT+IA++ L+GRVFE +LADL
Sbjct: 23 ETMARKEWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLRGRVFEANLADL 74
>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
to ribosomal protein S3a - Equus caballus
Length = 153
Score = 87.4 bits (207), Expect = 4e-16
Identities = 39/54 (72%), Positives = 47/54 (87%)
Frame = +3
Query: 93 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQ 254
VD ++KDWYD+KAP+MF+ R +G TLV RTQGTKIAS+GLKG VFE+SLADLQ
Sbjct: 22 VDQISKKDWYDMKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGGVFEMSLADLQ 75
Score = 37.1 bits (82), Expect = 0.50
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +2
Query: 269 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTD 361
E +FRKF+LI E VQG+ L NF M L+ D
Sbjct: 78 EVAFRKFKLITEDVQGKRCLINFRSMGLSCD 108
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 87.4 bits (207), Expect = 4e-16
Identities = 43/122 (35%), Positives = 72/122 (59%)
Frame = +2
Query: 269 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 448
+ ++RK +LI + V+G +F+G+D T DK+ M+KK QTLIE ++ ++ DGY+LR+
Sbjct: 77 QMAWRKVKLIIDDVEGTRCRTSFYGLDSTKDKIFGMIKKRQTLIETQVEARSQDGYILRI 136
Query: 449 FCIGFTNKDSLSQRKTCYAQTLRSEQSERKCVKSLHATSLTSELREVVNKLIPDSIAKDI 628
F I FT QRKT YAQ + + +K V+ + + +++ +S+AK+I
Sbjct: 137 FVIAFTKSIKNQQRKTTYAQRSQIKDIRKKIVEIVLKEVSKKSITQLLGFFNQESLAKEI 196
Query: 629 EK 634
K
Sbjct: 197 GK 198
Score = 62.9 bits (146), Expect = 9e-09
Identities = 26/54 (48%), Positives = 38/54 (70%)
Frame = +3
Query: 93 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQ 254
+DP RK+W+++ AP F+ G T +N++ GT +A+E +KGRV E SLADLQ
Sbjct: 19 IDPLARKEWFELTAPVPFAAGGFGYTCINKSAGTVVATEAIKGRVVEASLADLQ 72
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 85.4 bits (202), Expect = 1e-15
Identities = 40/55 (72%), Positives = 47/55 (85%)
Frame = +3
Query: 90 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQ 254
+VDPF++KDWYDV AP+MF+ R +G TLV RTQGTKIAS+ GRVFEVSLADLQ
Sbjct: 21 VVDPFSKKDWYDVNAPAMFNIRNIGKTLVTRTQGTKIASD---GRVFEVSLADLQ 72
Score = 54.8 bits (126), Expect = 2e-06
Identities = 27/54 (50%), Positives = 37/54 (68%)
Frame = +2
Query: 269 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTD 430
E +FRKF+LI E VQG+N L NFHG+DLT+DK+ ++K I +V+T D
Sbjct: 75 EVAFRKFKLITEDVQGKNCLTNFHGVDLTSDKITSQIRKKMMEIMTR-EVQTND 127
Score = 42.3 bits (95), Expect = 0.013
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = +2
Query: 518 SEQSERKCVKSLHATSLTSELREVVNKLIPDSIAKDIEK 634
+ Q +K ++ + T++L+EVVNKLIPDSI KD+EK
Sbjct: 108 TSQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDVEK 146
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 75.4 bits (177), Expect = 2e-12
Identities = 46/131 (35%), Positives = 72/131 (54%), Gaps = 1/131 (0%)
Frame = +2
Query: 281 RKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIG 460
RKF ++G + F GM+LT+DK + M+KKW TLIEA D+ DG V RVF +G
Sbjct: 34 RKFIFKIGDIKGSECVGFFDGMELTSDKHKAMIKKWHTLIEAQKDIVAKDGSVFRVFVMG 93
Query: 461 FTNKDSLSQRKTCYAQTLRSEQSERKCVKSLHATSLTS-ELREVVNKLIPDSIAKDIEKG 637
T + +KTCY + E+ RK + + L+ ++++++ KL +++ K IE+
Sbjct: 94 VTRRHPGYVKKTCYVKH-SDEKKIRKIMFDVIEEELSGCDVQKIMKKLANETVGKRIEE- 151
Query: 638 LPWASNPLARC 670
L PL C
Sbjct: 152 LGSEIFPLQNC 162
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 73.3 bits (172), Expect = 6e-12
Identities = 38/122 (31%), Positives = 66/122 (54%)
Frame = +2
Query: 263 DAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVL 442
D ++R F G V F GM LT DKL +++K++T+I+A++D KT DG++L
Sbjct: 73 DLSHAYRLFSW-RSIAAGSEVYTQFAGMRLTHDKLDSIMRKYRTMIDASVDAKTADGFIL 131
Query: 443 RVFCIGFTNKDSLSQRKTCYAQTLRSEQSERKCVKSLHATSLTSELREVVNKLIPDSIAK 622
R+F IGFT K + S + YA + ++ Q +K+L + + ++ + + I
Sbjct: 132 RLFTIGFTKKLANSHKNHTYANSHKARQVRDVMIKALTDACEANGVEQLCKDFVDEKIEN 191
Query: 623 DI 628
+I
Sbjct: 192 EI 193
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 67.3 bits (157), Expect = 4e-10
Identities = 30/99 (30%), Positives = 54/99 (54%)
Frame = +2
Query: 335 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQTL 514
FHG+ LT DK+ ++KKW TLIE ++ KT DGY L++F I + K + KT Y +
Sbjct: 96 FHGLTLTRDKICSLIKKWHTLIEVEVNFKTKDGYFLKLFLIAQSKKPKNMKSKTVYINSS 155
Query: 515 RSEQSERKCVKSLHATSLTSELREVVNKLIPDSIAKDIE 631
+ R+ + + ++++ ++++ I + IE
Sbjct: 156 QKRALRRRITDIIIKEGINMDIKDFIHRIYSLKIYEKIE 194
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 65.7 bits (153), Expect = 1e-09
Identities = 31/75 (41%), Positives = 44/75 (58%)
Frame = +2
Query: 284 KFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGF 463
KF L + V L NFHGMD+T K + +K I+ +D+ TTDGY+LRVF I F
Sbjct: 83 KFYLQTQLVSDGKCLTNFHGMDITRHKYGSLFRKGCDCIDVFMDIPTTDGYLLRVFVIAF 142
Query: 464 TNKDSLSQRKTCYAQ 508
T++ +RK C+ +
Sbjct: 143 TDRFRFQRRKNCHVK 157
Score = 57.6 bits (133), Expect = 3e-07
Identities = 23/52 (44%), Positives = 36/52 (69%)
Frame = +3
Query: 96 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADL 251
DP+ +K+WY V AP+ F R +G T V +T G ++A++ + RV+EV+L DL
Sbjct: 20 DPYLKKEWYPVIAPAHFKSRHIGQTPVTKTAGLRVATDVINHRVYEVNLGDL 71
>UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_72, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 168
Score = 55.2 bits (127), Expect = 2e-06
Identities = 29/75 (38%), Positives = 46/75 (61%)
Frame = -1
Query: 248 ISQGNFENSSLQSFRSNFRSLGTVDKRGADLPLAEHRRSLDIVPIFASEWVDNLLLNTFF 69
ISQGN ++S L+ FR + S + +K A++ AE RR L+++P+ S+ V LLL++ F
Sbjct: 82 ISQGNLKHSVLEPFRGDLGSQSSANKGFANISDAEDRRRLNVIPVLLSKRVGCLLLSSLF 141
Query: 68 TALRQAFIFPDRHVQ 24
L +FPD H +
Sbjct: 142 -PLGNPLVFPDDHCE 155
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 47.6 bits (108), Expect = 4e-04
Identities = 28/76 (36%), Positives = 43/76 (56%)
Frame = +2
Query: 263 DAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVL 442
D ++ K L V G + G +LTTD +R +VK+ + I+AN+DV+T DG+V+
Sbjct: 58 DMTKNNTKVILRVNNVVGDIATTDLMGHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVI 117
Query: 443 RVFCIGFTNKDSLSQR 490
RV FT K + S +
Sbjct: 118 RVKPTCFTIKRARSSQ 133
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 47.2 bits (107), Expect = 5e-04
Identities = 27/108 (25%), Positives = 59/108 (54%)
Frame = +2
Query: 308 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 487
VQG N F G D+TTD +R M+++ ++ I+ +V+T+DGY +RV + ++ S
Sbjct: 77 VQGTNAYTRFIGHDMTTDYIRRMIRRRRSRIDMIFNVETSDGYRMRVKVLTVPDRRIKSS 136
Query: 488 RKTCYAQTLRSEQSERKCVKSLHATSLTSELREVVNKLIPDSIAKDIE 631
KT + ++ +E+ A + + ++ +++ P ++K+++
Sbjct: 137 IKTEIRKKIQEYLTEK-----ARAMTFSEYVKYIISDDAPRELSKELK 179
>UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S3Ae -
Pyrobaculum aerophilum
Length = 221
Score = 46.8 bits (106), Expect = 6e-04
Identities = 22/61 (36%), Positives = 35/61 (57%)
Frame = +2
Query: 284 KFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGF 463
K + V+G L F G++LT D +R +V+K + + A +VKT DG V+R+ +G
Sbjct: 74 KLKFQIHRVEGLKALTRFKGLELTRDYIRSLVRKGTSKVTAITEVKTKDGMVMRIAVLGI 133
Query: 464 T 466
T
Sbjct: 134 T 134
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 46.4 bits (105), Expect = 8e-04
Identities = 35/145 (24%), Positives = 64/145 (44%)
Frame = +2
Query: 209 RIEGKSFRSFPG*STTDTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKW 388
++ G++ + T D + +++K V G N F +LT + L + ++
Sbjct: 43 KVVGRTVETTLAELTNDYSNQNTYKKLIFKVYRVAGDNAYTKFWRFELTREYLNSLTRRR 102
Query: 389 QTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQTLRSEQSERKCVKSLHATSL 568
+ IE +DV T DGY LRV + FT + + +K +R + V+ + +
Sbjct: 103 TSKIEDIVDVTTADGYKLRVKSVVFTVRRCKTSQKRAIRAIMR-----QIVVEKASSLNF 157
Query: 569 TSELREVVNKLIPDSIAKDIEKGLP 643
L+E V +P I K+ +K P
Sbjct: 158 VQFLQECVLGKVPAEIYKNAKKIYP 182
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 46.0 bits (104), Expect = 0.001
Identities = 38/143 (26%), Positives = 67/143 (46%)
Frame = +2
Query: 206 GRIEGKSFRSFPG*STTDTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 385
G++ G+ S G T D + FR+ E + G + +F G +LT D +R +VK+
Sbjct: 40 GKMIGRVMESTLGDVTGDWTKQNIKMIFRI--EEIGGNSAYTSFLGHELTRDYMRSLVKR 97
Query: 386 WQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQTLRSEQSERKCVKSLHATS 565
+ I+AN+ V T DG+ +RV I T K A+T + E + + ++
Sbjct: 98 RTSKIDANVVVTTKDGFKVRVKPIVLTVK---------RARTSQIESIRQIMINVVNKRG 148
Query: 566 LTSELREVVNKLIPDSIAKDIEK 634
E +N+++ +A +I K
Sbjct: 149 AELGFTEFINEVVTGKVASEIYK 171
Score = 36.3 bits (80), Expect = 0.87
Identities = 22/62 (35%), Positives = 33/62 (53%)
Frame = +3
Query: 93 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQLTLTRK 272
VD F K+WY V AP+ F++ +G TL + G I GRV E +L D+ T++
Sbjct: 9 VDAFRAKNWYQVIAPAEFNRANIGETLAD-DPGKMI------GRVMESTLGDVTGDWTKQ 61
Query: 273 GL 278
+
Sbjct: 62 NI 63
>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
ribosomal protein S3a; v-fos transformation effector
protein 1; n=2; Eutheria|Rep: Similar to ribosomal
protein S3a; 40S ribosomal protein S3a; v-fos
transformation effector protein 1 - Homo sapiens (Human)
Length = 119
Score = 41.5 bits (93), Expect = 0.023
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = +3
Query: 90 IVDPFTRKDWYDVKAPSMFSKRQVGTT 170
++D F++KDWYDVKA +MF+ R +G T
Sbjct: 21 VIDQFSKKDWYDVKALAMFNIRNIGKT 47
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 41.1 bits (92), Expect = 0.031
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Frame = +2
Query: 308 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDS-LS 484
V+G F G L D +R +V++ + I+ IDV T DGY +RV + FT + + S
Sbjct: 66 VEGTTAYSKFEGHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAGLAFTTRRAKTS 125
Query: 485 QRKTCYAQTLR-SEQSERKC 541
Q++ + + E++ ++C
Sbjct: 126 QQRAIRKEMFKVIEENAKEC 145
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 39.5 bits (88), Expect = 0.093
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Frame = +2
Query: 209 RIEGKSFRSFPG*STTDTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKW 388
++ G++ + G T D+ A + F++ V F +LT D LR +V++
Sbjct: 39 QVVGRTITTTLGELTGDSGANNTKLTFKITD--VGSDTAYTEFIKYELTRDYLRSLVRRG 96
Query: 389 QTLIEANIDVKTTDGYVLRVFCIGFTNKDS-LSQRK 493
+ +EA+I V TTD Y +RV + T K + SQ K
Sbjct: 97 ASKVEASITVLTTDDYRIRVQPVALTTKKADRSQEK 132
>UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6;
Methanococcales|Rep: 30S ribosomal protein S3Ae -
Methanococcus maripaludis
Length = 225
Score = 39.5 bits (88), Expect = 0.093
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Frame = +2
Query: 185 PGNE--NCFGRIEGKSFRSFPG*STTDTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTT 358
P N+ N GRI S R T+ ++ R + + + V G N F G D T
Sbjct: 42 PANDPANLIGRISEISLRDL-----TNEHSKHMTRMYFKV-DGVSGNNATSQFVGHDTTR 95
Query: 359 DKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKT 496
+ L+ V++ ++ I A ++V+T DG+ +RV + T + KT
Sbjct: 96 EYLKSQVRRRRSKINAIVEVRTKDGFKVRVKALVLTAVRARDHHKT 141
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 39.1 bits (87), Expect = 0.12
Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 11/128 (8%)
Frame = +2
Query: 308 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 487
V+G F G +L D +R + ++ + + +V T DGY LRV + FT + +
Sbjct: 70 VEGDTAYTRFKGHELLRDYIRGLTRRKSSKVTGIFNVWTKDGYGLRVTAMAFTRQRCKTS 129
Query: 488 RKTCYAQTLRS--EQSERK---------CVKSLHATSLTSELREVVNKLIPDSIAKDIEK 634
+K+ + ++ EQ R+ V S H SL + E K+ P + +
Sbjct: 130 QKSAIRKVMQEIVEQKARESTLDELIQLMVFSDHEGSLAYLIDESARKIYPLRKVEIAKS 189
Query: 635 GLPWASNP 658
L W P
Sbjct: 190 KLLWVPGP 197
>UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n=2;
Methanobacteriaceae|Rep: Small subunit ribosomal protein
S3Ae - Methanobrevibacter smithii (strain PS / ATCC
35061 / DSM 861)
Length = 193
Score = 37.9 bits (84), Expect = 0.29
Identities = 24/96 (25%), Positives = 44/96 (45%)
Frame = +2
Query: 263 DAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVL 442
D + + K R + V G F G TTD +R M+++ + I+A+ VKT D +
Sbjct: 59 DFSKQYIKLRFEIDNVAGDVANTKFTGHKTTTDYVRSMIRRGTSRIDASSVVKTKDDRKV 118
Query: 443 RVFCIGFTNKDSLSQRKTCYAQTLRSEQSERKCVKS 550
++ + T + + S ++ Q + +E KS
Sbjct: 119 KLHVLAVTTRRAKSSQQKYMRQVINDLLAETAAEKS 154
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 37.1 bits (82), Expect = 0.50
Identities = 28/94 (29%), Positives = 49/94 (52%)
Frame = +2
Query: 191 NENCFGRIEGKSFRSFPG*STTDTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 370
+E+ GRI + + F G D +FR ++E V G++ L F G T+ +R
Sbjct: 51 DEHIIGRIYEMTQQEFNG----DFTKMHVMLRFR-VSETV-GQDALTTFVGHHHQTNHIR 104
Query: 371 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNK 472
+++++ I+ IDV T DGY++R+ + T K
Sbjct: 105 RQIRRYRGKIDDVIDVVTEDGYLVRIKPLIITQK 138
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 37.1 bits (82), Expect = 0.50
Identities = 24/102 (23%), Positives = 49/102 (48%)
Frame = +2
Query: 209 RIEGKSFRSFPG*STTDTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKW 388
++ G++ + G T D + F++ V + F +LT D LR +V++
Sbjct: 39 KVLGRTIETTLGELTNDASENNTKLTFKI--NEVASDSAYTEFIRHELTRDYLRSLVRRG 96
Query: 389 QTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQTL 514
+ +EA I V TTD Y +++ + T K + + ++ +T+
Sbjct: 97 SSKVEAYITVLTTDDYRVQIQPVAVTTKKADASQEKAIRRTM 138
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 36.7 bits (81), Expect = 0.66
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 311 QGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 466
+G + F G +L+ D +R +V++ + I +D+ T DG+ LRV + T
Sbjct: 79 EGERLFTEFAGHELSRDYVRSLVRRKSSKINKVVDITTKDGFTLRVKTLALT 130
>UniRef50_Q8WS94 Cluster: KAL-1; n=3; Caenorhabditis|Rep: KAL-1 -
Caenorhabditis elegans
Length = 700
Score = 34.7 bits (76), Expect = 2.7
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = -1
Query: 701 PSRLFTFSEANIAPEG*MPMAGPSRCPWQWSQESTCSPPP*VQKLVTSRVMISHIF 534
P R + F A ++ EG + + PS+ P++ S+E+ PPP L S+V+ S ++
Sbjct: 229 PGRFYEFRTAAVSQEGSLGFSSPSK-PFKISKEAKAPPPPKDLSLGASKVVASGLW 283
>UniRef50_A5ZLU4 Cluster: Sensor protein; n=1; Bacteroides caccae
ATCC 43185|Rep: Sensor protein - Bacteroides caccae ATCC
43185
Length = 917
Score = 34.3 bits (75), Expect = 3.5
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +2
Query: 362 KLRWMVKKWQTLIEANIDV-KTTDGYVLRVFCIGFTNKDSLSQRKTCYAQTLRSEQSERK 538
K +W K+WQTLI I V + G ++R IGF N + ++E S+R
Sbjct: 491 KTKWN-KEWQTLIITGIQVERDKRGKIIRYTGIGFNNTKWEKMAQELKILKDKAELSDR- 548
Query: 539 CVKSLHATSLTSELREVVNKLI 604
+KS +++ E+R +N ++
Sbjct: 549 -LKSAFLANMSHEIRTPLNAIV 569
>UniRef50_A7EBC3 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 925
Score = 34.3 bits (75), Expect = 3.5
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = +2
Query: 464 TNKDSLSQRKTCYAQTLRSEQSERKCVKSLHATSLTSELREVVNKLIPDSIAKDIEKGLP 643
T+++++S + + Y + L + T+L S + + DS KDI+ GLP
Sbjct: 161 TSQENISSKLSDYVENLNPTLEAKNHRSQSPGTTLWSVQVPIEGAVGKDSAIKDIKFGLP 220
Query: 644 WASNPLAR 667
W + LAR
Sbjct: 221 WGHDKLAR 228
>UniRef50_A6RL44 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 875
Score = 34.3 bits (75), Expect = 3.5
Identities = 20/75 (26%), Positives = 35/75 (46%)
Frame = +2
Query: 443 RVFCIGFTNKDSLSQRKTCYAQTLRSEQSERKCVKSLHATSLTSELREVVNKLIPDSIAK 622
R+ T+++++S + Y Q L + + T+L S + + +S K
Sbjct: 155 RIVLKTITSQENISSNLSDYVQGLNTSLEVKNYRSQSPGTTLWSVQVPIEGAVGKESALK 214
Query: 623 DIEKGLPWASNPLAR 667
DI+ GLPW + LAR
Sbjct: 215 DIKFGLPWGQDKLAR 229
>UniRef50_A4VEU4 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 2300
Score = 33.9 bits (74), Expect = 4.6
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Frame = +2
Query: 452 CIGFT--NKDSLSQRKTCYAQTLRSEQSERKCVKSLHATSLTSELREVVNKLIPDS-IAK 622
CI FT K +++ K C Q R E S+RKC K L +T L EL + K+ ++ + K
Sbjct: 353 CIHFTANTKSLINKFKYCKDQR-RQEYSKRKC-KKLKSTQLLKELIKAQIKISQNTELLK 410
Query: 623 DIEKGL 640
+++KG+
Sbjct: 411 ELKKGI 416
>UniRef50_A0IK20 Cluster: Transcriptional regulator, LacI family;
n=1; Serratia proteamaculans 568|Rep: Transcriptional
regulator, LacI family - Serratia proteamaculans 568
Length = 333
Score = 33.5 bits (73), Expect = 6.1
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Frame = -3
Query: 459 PMQKTRRTYPSVVF-TSMLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINL-N 286
P R P +F T+ +M V ++ +H SL + + + + + + L +
Sbjct: 232 PQLLAARPAPQAIFCTADSMAMGVMDYIRLHTSLRIPQDVAVYGFDDIPMAAWPSYQLTS 291
Query: 285 LRKDLSASVSVVDQPGKLRKLFPSILPKQFSFP 187
+R+D+SA ++ + Q +LR P P+Q + P
Sbjct: 292 VRRDISAMIAAIVQLIELRSSSPQAAPQQVTIP 324
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 33.5 bits (73), Expect = 6.1
Identities = 18/77 (23%), Positives = 38/77 (49%)
Frame = +2
Query: 263 DAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVL 442
D +++ K + V + F + + + LR +V++ + + +DVKT+DGYV
Sbjct: 58 DPQQNNYKIYFQIDKVSEESATSIFKRYEYSKEYLRSLVRRGSSKVNYIVDVKTSDGYVF 117
Query: 443 RVFCIGFTNKDSLSQRK 493
R+ + T + + +K
Sbjct: 118 RLKVLALTYRHLNTSKK 134
>UniRef50_Q7SAV9 Cluster: Predicted protein; n=1; Neurospora
crassa|Rep: Predicted protein - Neurospora crassa
Length = 355
Score = 33.1 bits (72), Expect = 8.1
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -3
Query: 774 PLAVHRLSPGEISNPISENLETGASFKTFHLFGGKHRARGLDAHGRPF 631
P A H GE +P + NLE + + G KHR R LD +G F
Sbjct: 218 PAAGHGHGSGEDHDPFNYNLEHNILYSVNNYQGNKHRNRRLDQNGDIF 265
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 850,664,811
Number of Sequences: 1657284
Number of extensions: 18443978
Number of successful extensions: 49013
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 46968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48991
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 66673674990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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