Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30865
         (785 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   2.1  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   3.7  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   3.7  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   4.8  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   6.4  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   6.4  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -1

Query: 212 SFRSNFRSLGTVDKRGADLPLAEHRRSLDIVP-IFASEWVDNLLLNTFFTAL 60
           S  S+  SL  + K  A LP+ +H R   +VP ++ + +   L L +F  ++
Sbjct: 2   SLYSSINSLVLISKIFALLPVKKHHRLEKLVPCVYLTSFSVVLSLGSFIVSV 53


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +3

Query: 372 GWLKNGRLSS 401
           GWLK G+LSS
Sbjct: 124 GWLKKGKLSS 133


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -1

Query: 482 SRSPYW*NQCRRHVERIHRLSSHQC 408
           +  P+  ++CR    R H L  H+C
Sbjct: 243 NEKPFECDKCRGRFRRRHHLVHHKC 267


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -3

Query: 561 VACNDFTHFLSDCSDLSVW 505
           ++C DF     DC+  S W
Sbjct: 19  LSCKDFDTLYRDCTTASSW 37


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 494 TCYAQTLRSEQSERKCVKSLHATSLTSELREVVNKL 601
           TC A T+ S+Q+   C K        SE+R  + KL
Sbjct: 297 TCDACTIASKQTISWCYKLQEQFVTNSEVRTELFKL 332


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 494 TCYAQTLRSEQSERKCVKSLHATSLTSELREVVNKL 601
           TC A T+ S+Q+   C K        SE+R  + KL
Sbjct: 297 TCDACTIASKQTISWCYKLQEQFVTNSEVRTELFKL 332


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,542
Number of Sequences: 336
Number of extensions: 4326
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)