Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30865
(785 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB, i... 169 3e-42
AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal pr... 169 4e-42
AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA, i... 169 4e-42
Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal prot... 163 2e-40
AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p pro... 148 7e-36
AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD, i... 118 9e-27
AY047501-1|AAK77233.1| 475|Drosophila melanogaster GH01161p pro... 30 4.1
AF119793-1|AAD34345.1| 463|Drosophila melanogaster TNF-receptor... 30 4.1
AF079838-1|AAD47895.1| 475|Drosophila melanogaster TRAF6 protein. 30 4.1
AE014298-1139|AAF46338.1| 475|Drosophila melanogaster CG10961-P... 30 4.1
X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr... 29 5.4
BT022231-1|AAY54647.1| 133|Drosophila melanogaster IP12465p pro... 29 7.2
>AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB,
isoform B protein.
Length = 218
Score = 169 bits (412), Expect = 3e-42
Identities = 87/146 (59%), Positives = 102/146 (69%), Gaps = 1/146 (0%)
Frame = +2
Query: 200 CFGRIE-GKSFRSFPG*STTDTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWM 376
CF ++ G+ F D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R M
Sbjct: 7 CFKPVKSGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSM 66
Query: 377 VKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQTLRSEQSERKCVKSLH 556
VKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ + + + +
Sbjct: 67 VKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIIT 126
Query: 557 ATSLTSELREVVNKLIPDSIAKDIEK 634
++L+++VNKL DSIAKDIEK
Sbjct: 127 NEVSGADLKQLVNKLALDSIAKDIEK 152
>AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal
protein S3a protein.
Length = 268
Score = 169 bits (411), Expect = 4e-42
Identities = 83/126 (65%), Positives = 95/126 (75%)
Frame = +2
Query: 257 DTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGY 436
D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY
Sbjct: 77 DIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGY 136
Query: 437 VLRVFCIGFTNKDSLSQRKTCYAQTLRSEQSERKCVKSLHATSLTSELREVVNKLIPDSI 616
+LRVFCIGFT KD SQRKTCYAQ + + + + ++L+++VNKL DSI
Sbjct: 137 LLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSI 196
Query: 617 AKDIEK 634
AKDIEK
Sbjct: 197 AKDIEK 202
Score = 98.3 bits (234), Expect = 1e-20
Identities = 44/55 (80%), Positives = 50/55 (90%)
Frame = +3
Query: 90 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQ 254
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQ 75
>AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA,
isoform A protein.
Length = 268
Score = 169 bits (411), Expect = 4e-42
Identities = 83/126 (65%), Positives = 95/126 (75%)
Frame = +2
Query: 257 DTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGY 436
D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY
Sbjct: 77 DIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGY 136
Query: 437 VLRVFCIGFTNKDSLSQRKTCYAQTLRSEQSERKCVKSLHATSLTSELREVVNKLIPDSI 616
+LRVFCIGFT KD SQRKTCYAQ + + + + ++L+++VNKL DSI
Sbjct: 137 LLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSI 196
Query: 617 AKDIEK 634
AKDIEK
Sbjct: 197 AKDIEK 202
Score = 98.3 bits (234), Expect = 1e-20
Identities = 44/55 (80%), Positives = 50/55 (90%)
Frame = +3
Query: 90 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQ 254
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQ 75
>Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal protein
S3a protein.
Length = 270
Score = 163 bits (397), Expect = 2e-40
Identities = 81/127 (63%), Positives = 95/127 (74%), Gaps = 1/127 (0%)
Frame = +2
Query: 257 DTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGY 436
D D E SFRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY
Sbjct: 78 DIDPEHSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGY 137
Query: 437 VLRVFCIGFTNKDSLSQRKTCYAQTLRSEQSERKCVKSLHATSLT-SELREVVNKLIPDS 613
+LRVFCIGFT KD SQRKTCYA + + + + ++ ++L+++VNKL DS
Sbjct: 138 LLRVFCIGFTAKDQQSQRKTCYAHESQVRKIRSGRMTDIITNEVSGADLKQLVNKLALDS 197
Query: 614 IAKDIEK 634
IAKDIEK
Sbjct: 198 IAKDIEK 204
Score = 90.6 bits (215), Expect = 2e-18
Identities = 42/56 (75%), Positives = 48/56 (85%), Gaps = 1/56 (1%)
Frame = +3
Query: 90 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLA-DLQ 254
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ KGRVFEVSL DLQ
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYFKGRVFEVSLVPDLQ 76
>AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p
protein.
Length = 217
Score = 148 bits (359), Expect = 7e-36
Identities = 73/108 (67%), Positives = 84/108 (77%)
Frame = +2
Query: 257 DTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGY 436
D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY
Sbjct: 77 DIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGY 136
Query: 437 VLRVFCIGFTNKDSLSQRKTCYAQTLRSEQSERKCVKSLHATSLTSEL 580
+LRVFCIGFT KD SQRKTCYAQ QS+ + +++ +T+E+
Sbjct: 137 LLRVFCIGFTAKDQQSQRKTCYAQ-----QSQVRKIRARMTDIITNEV 179
Score = 98.3 bits (234), Expect = 1e-20
Identities = 44/55 (80%), Positives = 50/55 (90%)
Frame = +3
Query: 90 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQ 254
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQ 75
>AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD,
isoform D protein.
Length = 163
Score = 118 bits (284), Expect = 9e-27
Identities = 58/97 (59%), Positives = 70/97 (72%)
Frame = +2
Query: 344 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQTLRSE 523
MDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +
Sbjct: 1 MDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVR 60
Query: 524 QSERKCVKSLHATSLTSELREVVNKLIPDSIAKDIEK 634
+ + + ++L+++VNKL DSIAKDIEK
Sbjct: 61 KIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEK 97
>AY047501-1|AAK77233.1| 475|Drosophila melanogaster GH01161p
protein.
Length = 475
Score = 29.9 bits (64), Expect = 4.1
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -2
Query: 685 PFRRQTSRQRVRCPWQAL-LDVLGNGVRNQLVHHL 584
P+RRQ Q +CP+ + D +G NQL HL
Sbjct: 193 PYRRQQEPQEEKCPFAKIKCDFVGRPETNQLEEHL 227
>AF119793-1|AAD34345.1| 463|Drosophila melanogaster
TNF-receptor-associated factor 2 protein.
Length = 463
Score = 29.9 bits (64), Expect = 4.1
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -2
Query: 685 PFRRQTSRQRVRCPWQAL-LDVLGNGVRNQLVHHL 584
P+RRQ Q +CP+ + D +G NQL HL
Sbjct: 181 PYRRQQEPQEEKCPFAKIKCDFVGRPETNQLEEHL 215
>AF079838-1|AAD47895.1| 475|Drosophila melanogaster TRAF6 protein.
Length = 475
Score = 29.9 bits (64), Expect = 4.1
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -2
Query: 685 PFRRQTSRQRVRCPWQAL-LDVLGNGVRNQLVHHL 584
P+RRQ Q +CP+ + D +G NQL HL
Sbjct: 193 PYRRQQEPQEEKCPFAKIKCDFVGRPETNQLEEHL 227
>AE014298-1139|AAF46338.1| 475|Drosophila melanogaster CG10961-PA
protein.
Length = 475
Score = 29.9 bits (64), Expect = 4.1
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -2
Query: 685 PFRRQTSRQRVRCPWQAL-LDVLGNGVRNQLVHHL 584
P+RRQ Q +CP+ + D +G NQL HL
Sbjct: 193 PYRRQQEPQEEKCPFAKIKCDFVGRPETNQLEEHL 227
>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
protein.
Length = 1053
Score = 29.5 bits (63), Expect = 5.4
Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 4/127 (3%)
Frame = +2
Query: 266 AERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEA-NIDVKTTDGYVL 442
A + FR + + E+V + CN T L V +W +++ N +++ +G
Sbjct: 795 AVKHFRHYLIGREFVVYTD--CNSLKASRTKIDLTPRVHRWWAYLQSFNFEIQYREGK-- 850
Query: 443 RVFCIGFTNKDSLSQRKTCYAQTL---RSEQSERKCVKSLHATSLTSELREVVNKLIPDS 613
R+ + F +++ LS + R SE L L E+ E+VNKL D
Sbjct: 851 RMAHVDFLSRNPLSPEHILSINKIPEKRVNLSEISSTWLLAEQRLDLEIIEIVNKLESDE 910
Query: 614 IAKDIEK 634
+A+++ K
Sbjct: 911 LAENLAK 917
>BT022231-1|AAY54647.1| 133|Drosophila melanogaster IP12465p
protein.
Length = 133
Score = 29.1 bits (62), Expect = 7.2
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +2
Query: 479 LSQRKTCYAQTLRSEQSERKCVKSLHATSLTSELREVVNKLIPDSIAKDIEKGLPWASN 655
++ R++C A++ S QS R C + +T+ ++ LR ++ +I S K GL S+
Sbjct: 20 MAARRSCSAKSRSSSQSRRNCWRRFLSTN-SARLRSCISCVIAASSMKSRVMGLTLESS 77
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,434,280
Number of Sequences: 53049
Number of extensions: 876205
Number of successful extensions: 2403
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2393
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3634208604
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -