BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS30865 (785 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z32681-6|CAA83605.1| 257|Caenorhabditis elegans Hypothetical pr... 136 2e-32 Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical pr... 35 0.076 Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical pr... 35 0.076 AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein. 35 0.076 U41993-7|AAA83450.2| 733|Caenorhabditis elegans Temporarily ass... 28 6.6 AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical... 28 6.6 AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical... 28 6.6 AF000263-10|AAM22070.1| 163|Caenorhabditis elegans Hypothetical... 28 6.6 AF000263-9|AAO21391.2| 184|Caenorhabditis elegans Hypothetical ... 28 6.6 AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical ... 28 6.6 AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical ... 28 6.6 Z81069-2|CAB02992.1| 310|Caenorhabditis elegans Hypothetical pr... 28 8.7 Z68118-1|CAA92186.2| 1014|Caenorhabditis elegans Hypothetical pr... 28 8.7 AF235027-1|AAF68380.1| 1017|Caenorhabditis elegans guanylyl cycl... 28 8.7 >Z32681-6|CAA83605.1| 257|Caenorhabditis elegans Hypothetical protein F56F3.5 protein. Length = 257 Score = 136 bits (328), Expect = 2e-32 Identities = 68/124 (54%), Positives = 84/124 (67%) Frame = +2 Query: 263 DAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVL 442 ++E FRKF+LIAE VQG+NVL NFH M +T DKL +VKKW TLIEAN VKTTDGY L Sbjct: 74 NSEADFRKFKLIAEDVQGKNVLTNFHAMSMTHDKLCSIVKKWHTLIEANTAVKTTDGYTL 133 Query: 443 RVFCIGFTNKDSLSQRKTCYAQTLRSEQSERKCVKSLHATSLTSELREVVNKLIPDSIAK 622 RVF I FT K +KT Y +T + + + + + +L+EVV+KLIPDSI K Sbjct: 134 RVFVIAFTKKSVNQVKKTSYTKTSKIRKIRSEMIGCIEKEVTGCDLKEVVSKLIPDSIGK 193 Query: 623 DIEK 634 DIEK Sbjct: 194 DIEK 197 Score = 100 bits (239), Expect = 1e-21 Identities = 44/53 (83%), Positives = 50/53 (94%) Frame = +3 Query: 93 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADL 251 VDPF+RK+WYD+KAP+MF+ RQVG TL+NRTQGTKIASEGLKGRVFEVSL DL Sbjct: 20 VDPFSRKEWYDIKAPNMFNTRQVGKTLINRTQGTKIASEGLKGRVFEVSLGDL 72 >Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical protein K03D10.1 protein. Length = 700 Score = 34.7 bits (76), Expect = 0.076 Identities = 18/56 (32%), Positives = 32/56 (57%) Frame = -1 Query: 701 PSRLFTFSEANIAPEG*MPMAGPSRCPWQWSQESTCSPPP*VQKLVTSRVMISHIF 534 P R + F A ++ EG + + PS+ P++ S+E+ PPP L S+V+ S ++ Sbjct: 229 PGRFYEFRTAAVSQEGSLGFSSPSK-PFKISKEAKAPPPPKDLSLGASKVVASGLW 283 >Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical protein K03D10.1 protein. Length = 700 Score = 34.7 bits (76), Expect = 0.076 Identities = 18/56 (32%), Positives = 32/56 (57%) Frame = -1 Query: 701 PSRLFTFSEANIAPEG*MPMAGPSRCPWQWSQESTCSPPP*VQKLVTSRVMISHIF 534 P R + F A ++ EG + + PS+ P++ S+E+ PPP L S+V+ S ++ Sbjct: 229 PGRFYEFRTAAVSQEGSLGFSSPSK-PFKISKEAKAPPPPKDLSLGASKVVASGLW 283 >AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein. Length = 700 Score = 34.7 bits (76), Expect = 0.076 Identities = 18/56 (32%), Positives = 32/56 (57%) Frame = -1 Query: 701 PSRLFTFSEANIAPEG*MPMAGPSRCPWQWSQESTCSPPP*VQKLVTSRVMISHIF 534 P R + F A ++ EG + + PS+ P++ S+E+ PPP L S+V+ S ++ Sbjct: 229 PGRFYEFRTAAVSQEGSLGFSSPSK-PFKISKEAKAPPPPKDLSLGASKVVASGLW 283 >U41993-7|AAA83450.2| 733|Caenorhabditis elegans Temporarily assigned gene nameprotein 153, isoform b protein. Length = 733 Score = 28.3 bits (60), Expect = 6.6 Identities = 17/54 (31%), Positives = 24/54 (44%) Frame = -3 Query: 339 WKLQSTLRPCTYSAINLNLRKDLSASVSVVDQPGKLRKLFPSILPKQFSFPGYG 178 WK LRP T + + NL K+ +S S PG + P + K + G G Sbjct: 33 WK---NLRPQTATGADTNLSKNTKSSDSANSSPGSRKSTSPPVSKKGIAQSGKG 83 >AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical protein T08B2.5f protein. Length = 838 Score = 28.3 bits (60), Expect = 6.6 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = -2 Query: 766 RSPAFAR*NFQSNF-GESRNGGLLQDFSPFRRQTSRQR 656 RSP++AR +S R GG + SP RR+TSR R Sbjct: 22 RSPSWAREARRSRSRSRDRRGGRSRSRSPSRRRTSRDR 59 >AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical protein T08B2.5c protein. Length = 866 Score = 28.3 bits (60), Expect = 6.6 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = -2 Query: 766 RSPAFAR*NFQSNF-GESRNGGLLQDFSPFRRQTSRQR 656 RSP++AR +S R GG + SP RR+TSR R Sbjct: 50 RSPSWAREARRSRSRSRDRRGGRSRSRSPSRRRTSRDR 87 >AF000263-10|AAM22070.1| 163|Caenorhabditis elegans Hypothetical protein T08B2.5d protein. Length = 163 Score = 28.3 bits (60), Expect = 6.6 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = -2 Query: 766 RSPAFAR*NFQSNF-GESRNGGLLQDFSPFRRQTSRQR 656 RSP++AR +S R GG + SP RR+TSR R Sbjct: 108 RSPSWAREARRSRSRSRDRRGGRSRSRSPSRRRTSRDR 145 >AF000263-9|AAO21391.2| 184|Caenorhabditis elegans Hypothetical protein T08B2.5e protein. Length = 184 Score = 28.3 bits (60), Expect = 6.6 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = -2 Query: 766 RSPAFAR*NFQSNF-GESRNGGLLQDFSPFRRQTSRQR 656 RSP++AR +S R GG + SP RR+TSR R Sbjct: 129 RSPSWAREARRSRSRSRDRRGGRSRSRSPSRRRTSRDR 166 >AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical protein T08B2.5a protein. Length = 924 Score = 28.3 bits (60), Expect = 6.6 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = -2 Query: 766 RSPAFAR*NFQSNF-GESRNGGLLQDFSPFRRQTSRQR 656 RSP++AR +S R GG + SP RR+TSR R Sbjct: 108 RSPSWAREARRSRSRSRDRRGGRSRSRSPSRRRTSRDR 145 >AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical protein T08B2.5b protein. Length = 925 Score = 28.3 bits (60), Expect = 6.6 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = -2 Query: 766 RSPAFAR*NFQSNF-GESRNGGLLQDFSPFRRQTSRQR 656 RSP++AR +S R GG + SP RR+TSR R Sbjct: 109 RSPSWAREARRSRSRSRDRRGGRSRSRSPSRRRTSRDR 146 >Z81069-2|CAB02992.1| 310|Caenorhabditis elegans Hypothetical protein F25H9.2 protein. Length = 310 Score = 27.9 bits (59), Expect = 8.7 Identities = 20/100 (20%), Positives = 47/100 (47%), Gaps = 6/100 (6%) Frame = +2 Query: 308 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGY--VLRVFCIGFTNKDSL 481 V G+N+ CN H + + ++ L ++ + + + Y LR+ + + + D+L Sbjct: 150 VDGKNIYCNKHILAMNSEVLMELLFPDEDHDVNELQLSNDFEYEPTLRIVKVFYNDGDAL 209 Query: 482 S----QRKTCYAQTLRSEQSERKCVKSLHATSLTSELREV 589 + YA L+SE + ++C + + T L + +++ Sbjct: 210 TGDNVDETLEYATKLKSENARQRCERWISKTQLLTAKKKM 249 >Z68118-1|CAA92186.2| 1014|Caenorhabditis elegans Hypothetical protein R01E6.1 protein. Length = 1014 Score = 27.9 bits (59), Expect = 8.7 Identities = 12/58 (20%), Positives = 29/58 (50%) Frame = +2 Query: 467 NKDSLSQRKTCYAQTLRSEQSERKCVKSLHATSLTSELREVVNKLIPDSIAKDIEKGL 640 +K +L + ++ E + +++ + ++N+++P SIAKD++ GL Sbjct: 759 SKGNLVDQMIRMSEKYADELEQMVAIRTADLADAQMQTMRLLNEMLPASIAKDLKNGL 816 >AF235027-1|AAF68380.1| 1017|Caenorhabditis elegans guanylyl cyclase protein. Length = 1017 Score = 27.9 bits (59), Expect = 8.7 Identities = 12/58 (20%), Positives = 29/58 (50%) Frame = +2 Query: 467 NKDSLSQRKTCYAQTLRSEQSERKCVKSLHATSLTSELREVVNKLIPDSIAKDIEKGL 640 +K +L + ++ E + +++ + ++N+++P SIAKD++ GL Sbjct: 762 SKGNLVDQMIRMSEKYADELEQMVAIRTADLADAQMQTMRLLNEMLPASIAKDLKNGL 819 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,375,757 Number of Sequences: 27780 Number of extensions: 437096 Number of successful extensions: 1104 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 1041 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1104 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1903721438 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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